RNA–Protein interactions for RNA: ENST00000597389.5

SPTBN4-211, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 5

Gene SPTBN4, Length 5,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-211ENST00000597389 KRTAP10-1P60331 282 aa12.09□□□□□ -0.47
SPTBN4-211ENST00000597389 LINC01558Q9Y6Z2 57 aa12.08□□□□□ -0.48
SPTBN4-211ENST00000597389 LCE6AA0A183 80 aa12.07□□□□□ -0.48
SPTBN4-211ENST00000597389 FLNAP21333 2647 aaKnown RBP12.07□□□□□ -0.48
SPTBN4-211ENST00000597389 KRTAP10-2P60368 255 aa12.06□□□□□ -0.48
SPTBN4-211ENST00000597389 CEP350Q5VT06 3117 aa12.03□□□□□ -0.48
SPTBN4-211ENST00000597389 PCNTO95613 3336 aa12.02□□□□□ -0.48
SPTBN4-211ENST00000597389 ITPR3Q14573 2671 aa12□□□□□ -0.49
SPTBN4-211ENST00000597389 LINC00472Q9H8W2 130 aa11.99□□□□□ -0.49
SPTBN4-211ENST00000597389 Q5VV11 94 aa11.97□□□□□ -0.49
SPTBN4-211ENST00000597389 SPRR1BP22528 89 aa11.96□□□□□ -0.49
SPTBN4-211ENST00000597389 ATRQ13535 2644 aa11.95□□□□□ -0.5
SPTBN4-211ENST00000597389 OXTP01178 125 aa11.91□□□□□ -0.5
SPTBN4-211ENST00000597389 HELZ2Q9BYK8 2649 aaKnown RBP11.9□□□□□ -0.5
SPTBN4-211ENST00000597389 C5orf42Q9H799 3197 aa11.9□□□□□ -0.5
SPTBN4-211ENST00000597389 M0QZ58 72 aa11.89□□□□□ -0.51
SPTBN4-211ENST00000597389 MAST4O15021 2626 aa11.89□□□□□ -0.51
SPTBN4-211ENST00000597389 KRTAP26-1Q6PEX3 210 aa11.87□□□□□ -0.51
SPTBN4-211ENST00000597389 PANO1I0J062 215 aa11.8□□□□□ -0.52
SPTBN4-211ENST00000597389 CHD7Q9P2D1 2997 aa11.79□□□□□ -0.52
SPTBN4-211ENST00000597389 PLAC4Q8WY50 150 aa11.78□□□□□ -0.52
SPTBN4-211ENST00000597389 ADM2Q7Z4H4 148 aa11.76□□□□□ -0.53
SPTBN4-211ENST00000597389 RPL37P61927 97 aaKnown RBP11.76□□□□□ -0.53
SPTBN4-211ENST00000597389 CFAP46Q8IYW2 2715 aa11.74□□□□□ -0.53
SPTBN4-211ENST00000597389 H1FX-AS1Q4G0G2 97 aa11.72□□□□□ -0.53
SPTBN4-211ENST00000597389 Q6ZR54 194 aa11.7□□□□□ -0.54
SPTBN4-211ENST00000597389 ROMO1P60602 79 aa11.69□□□□□ -0.54
SPTBN4-211ENST00000597389 A0A087X002 238 aa11.69□□□□□ -0.54
SPTBN4-211ENST00000597389 SPATA8Q6RVD6 105 aa11.66□□□□□ -0.54
SPTBN4-211ENST00000597389 ASB16-AS1Q495Z4 193 aa11.61□□□□□ -0.55
SPTBN4-211ENST00000597389 STAB1Q9NY15 2570 aa11.6□□□□□ -0.55
SPTBN4-211ENST00000597389 CHD9Q3L8U1 2897 aa11.57□□□□□ -0.56
SPTBN4-211ENST00000597389 KRTAP16-1A8MUX0 517 aa11.57□□□□□ -0.56
SPTBN4-211ENST00000597389 KRTAP4-16G5E9R7 235 aaPredicted RBP11.55□□□□□ -0.56
SPTBN4-211ENST00000597389 HTTP42858 3142 aa11.5□□□□□ -0.57
SPTBN4-211ENST00000597389 NOTCH2NLQ7Z3S9 236 aa11.49□□□□□ -0.57
SPTBN4-211ENST00000597389 FLG2Q5D862 2391 aaPredicted RBP11.48□□□□□ -0.57
SPTBN4-211ENST00000597389 TEX15Q9BXT5 2789 aa11.47□□□□□ -0.57
SPTBN4-211ENST00000597389 KRTAP29-1A8MX34 341 aaPredicted RBP11.45□□□□□ -0.58
SPTBN4-211ENST00000597389 KRTAP11-1Q8IUC1 163 aa11.44□□□□□ -0.58
SPTBN4-211ENST00000597389 CHD6Q8TD26 2715 aa11.42□□□□□ -0.58
SPTBN4-211ENST00000597389 NBEAL1Q6ZS30 2694 aa11.41□□□□□ -0.58
SPTBN4-211ENST00000597389 A0A0C4DFX4 3053 aa11.41□□□□□ -0.58
SPTBN4-211ENST00000597389 AKAP13Q12802 2813 aa11.41□□□□□ -0.58
SPTBN4-211ENST00000597389 TEP1Q99973 2627 aaKnown RBP11.41□□□□□ -0.58
SPTBN4-211ENST00000597389 CENPEQ02224 2701 aa11.4□□□□□ -0.58
SPTBN4-211ENST00000597389 CFAP54Q96N23 3096 aa11.37□□□□□ -0.59
SPTBN4-211ENST00000597389 RANBP2P49792 3224 aaKnown RBP11.35□□□□□ -0.59
SPTBN4-211ENST00000597389 MKI67P46013 3256 aaKnown RBP11.35□□□□□ -0.59
SPTBN4-211ENST00000597389 A8MUU9 505 aa11.35□□□□□ -0.59
SPTBN4-211ENST00000597389 Q6ZRN7 208 aaPredicted RBP11.34□□□□□ -0.59
SPTBN4-211ENST00000597389 TRANK1O15050 2925 aa11.32□□□□□ -0.6
SPTBN4-211ENST00000597389 SETXQ7Z333 2677 aaKnown RBP11.31□□□□□ -0.6
SPTBN4-211ENST00000597389 A6NN06 94 aa11.31□□□□□ -0.6
SPTBN4-211ENST00000597389 BRCA2P51587 3418 aa11.3□□□□□ -0.6
SPTBN4-211ENST00000597389 RPS29P62273 56 aaKnown RBP11.3□□□□□ -0.6
SPTBN4-211ENST00000597389 C20orf166-AS1Q96NR2 134 aa11.29□□□□□ -0.6
SPTBN4-211ENST00000597389 MGAQ8IWI9 3026 aa11.28□□□□□ -0.6
SPTBN4-211ENST00000597389 KRTAP25-1Q3LHN0 102 aa11.27□□□□□ -0.61
SPTBN4-211ENST00000597389 A8MU10 97 aa11.27□□□□□ -0.61
SPTBN4-211ENST00000597389 KRTAP13-2Q52LG2 175 aa11.26□□□□□ -0.61
SPTBN4-211ENST00000597389 DMBT1Q9UGM3 2413 aaPredicted RBP11.22□□□□□ -0.61
SPTBN4-211ENST00000597389 COL6A5A8TX70 2615 aa11.22□□□□□ -0.61
SPTBN4-211ENST00000597389 LAMA3Q16787 3333 aa11.21□□□□□ -0.61
SPTBN4-211ENST00000597389 KRTAP7-1Q8IUC3 87 aa11.21□□□□□ -0.62
SPTBN4-211ENST00000597389 UNC79Q9P2D8 2635 aa11.2□□□□□ -0.62
SPTBN4-211ENST00000597389 GCN1Q92616 2671 aaKnown RBP11.18□□□□□ -0.62
SPTBN4-211ENST00000597389 LAMA2P24043 3122 aaKnown RBP11.15□□□□□ -0.62
SPTBN4-211ENST00000597389 NDUFAF8A1L188 74 aa11.13□□□□□ -0.63
SPTBN4-211ENST00000597389 BAHCC1Q9P281 2608 aa11.12□□□□□ -0.63
SPTBN4-211ENST00000597389 ZNF292O60281 2723 aa11.09□□□□□ -0.63
SPTBN4-211ENST00000597389 TRIOO75962 3097 aa11.07□□□□□ -0.64
SPTBN4-211ENST00000597389 UNC80Q8N2C7 3258 aa11.06□□□□□ -0.64
SPTBN4-211ENST00000597389 KRTAP13-1Q8IUC0 172 aa11.06□□□□□ -0.64
SPTBN4-211ENST00000597389 NOTCH1P46531 2555 aa11.05□□□□□ -0.64
SPTBN4-211ENST00000597389 WDFY4Q6ZS81 3184 aa11.02□□□□□ -0.64
SPTBN4-211ENST00000597389 NBEAL2Q6ZNJ1 2754 aa11.01□□□□□ -0.65
SPTBN4-211ENST00000597389 STAB2Q8WWQ8 2551 aa10.99□□□□□ -0.65
SPTBN4-211ENST00000597389 TNP1P09430 55 aa10.96□□□□□ -0.66
SPTBN4-211ENST00000597389 PRUNE2Q8WUY3 3088 aa10.94□□□□□ -0.66
SPTBN4-211ENST00000597389 CDH23Q9H251 3354 aa10.94□□□□□ -0.66
SPTBN4-211ENST00000597389 KRTAP21-3Q3LHN1 58 aa10.91□□□□□ -0.66
SPTBN4-211ENST00000597389 DNAH14Q0VDD8 3507 aa10.9□□□□□ -0.66
SPTBN4-211ENST00000597389 XIRP2A4UGR9 3374 aa10.9□□□□□ -0.66
SPTBN4-211ENST00000597389 IGSF10Q6WRI0 2623 aa10.9□□□□□ -0.66
SPTBN4-211ENST00000597389 FRYQ5TBA9 3013 aa10.9□□□□□ -0.66
SPTBN4-211ENST00000597389 A0A1B0GVY2 172 aa10.89□□□□□ -0.67
SPTBN4-211ENST00000597389 DSPP15924 2871 aaKnown RBP10.87□□□□□ -0.67
SPTBN4-211ENST00000597389 CELSR3Q9NYQ7 3312 aa10.86□□□□□ -0.67
SPTBN4-211ENST00000597389 ITPR2Q14571 2701 aa10.85□□□□□ -0.67
SPTBN4-211ENST00000597389 C10orf95Q9H7T3 257 aa10.84□□□□□ -0.67
SPTBN4-211ENST00000597389 VPS13AQ96RL7 3174 aa10.82□□□□□ -0.68
SPTBN4-211ENST00000597389 UBR5O95071 2799 aaPredicted RBP10.82□□□□□ -0.68
SPTBN4-211ENST00000597389 KRTAP10-8P60410 259 aa10.79□□□□□ -0.68
SPTBN4-211ENST00000597389 MAP1AP78559 2803 aaPredicted RBP10.78□□□□□ -0.68
SPTBN4-211ENST00000597389 FREM2Q5SZK8 3169 aa10.77□□□□□ -0.68
SPTBN4-211ENST00000597389 NSD1Q96L73 2696 aaPredicted RBP10.74□□□□□ -0.69
SPTBN4-211ENST00000597389 XP32Q5T750 250 aa10.73□□□□□ -0.69
SPTBN4-211ENST00000597389 SZT2Q5T011 3432 aa10.64□□□□□ -0.71
SPTBN4-211ENST00000597389 VCANP13611 3396 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms