RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 IGLV8-61A0A075B6I0 122 aa9.71□□□□□ -0.86
CHMP2A-203ENST00000597209 PCOTHQ58A44 107 aa9.71□□□□□ -0.86
CHMP2A-203ENST00000597209 BVES-AS1Q5T3Y7 98 aa9.71□□□□□ -0.86
CHMP2A-203ENST00000597209 Q6JHZ5 121 aa9.71□□□□□ -0.86
CHMP2A-203ENST00000597209 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.7□□□□□ -0.86
CHMP2A-203ENST00000597209 PPDPFLQ8WWR9 84 aa9.69□□□□□ -0.86
CHMP2A-203ENST00000597209 OCIAD2Q56VL3 154 aa9.67□□□□□ -0.86
CHMP2A-203ENST00000597209 C12orf57Q99622 126 aa9.67□□□□□ -0.86
CHMP2A-203ENST00000597209 CLEC2BQ92478 149 aa9.66□□□□□ -0.86
CHMP2A-203ENST00000597209 LCE2CQ5TA81 110 aa9.65□□□□□ -0.86
CHMP2A-203ENST00000597209 IGFL1Q6UW32 110 aa9.65□□□□□ -0.86
CHMP2A-203ENST00000597209 HIGD1BQ9P298 99 aa9.64□□□□□ -0.87
CHMP2A-203ENST00000597209 TRBV7-7A0A0K0K1E9 115 aa9.63□□□□□ -0.87
CHMP2A-203ENST00000597209 CFC1BP0CG36 223 aa9.63□□□□□ -0.87
CHMP2A-203ENST00000597209 CFC1P0CG37 223 aa9.63□□□□□ -0.87
CHMP2A-203ENST00000597209 KRTAP19-2Q3LHN2 52 aa9.63□□□□□ -0.87
CHMP2A-203ENST00000597209 RPL37P61927 97 aaKnown RBP9.62□□□□□ -0.87
CHMP2A-203ENST00000597209 C14orf144Q96I85 54 aa9.62□□□□□ -0.87
CHMP2A-203ENST00000597209 SNHG12Q9BXW3 62 aa9.61□□□□□ -0.87
CHMP2A-203ENST00000597209 A0A0B4J2C4 111 aa9.6□□□□□ -0.87
CHMP2A-203ENST00000597209 SPATA45Q537H7 98 aa9.6□□□□□ -0.87
CHMP2A-203ENST00000597209 RAB37Q96AX2 223 aa9.6□□□□□ -0.87
CHMP2A-203ENST00000597209 H0YGX0 51 aa9.59□□□□□ -0.87
CHMP2A-203ENST00000597209 PAM16Q9Y3D7 125 aa9.59□□□□□ -0.87
CHMP2A-203ENST00000597209 SNCGO76070 127 aa9.58□□□□□ -0.88
CHMP2A-203ENST00000597209 C2orf91Q6ZV80 131 aa9.57□□□□□ -0.88
CHMP2A-203ENST00000597209 VAMP8Q9BV40 100 aa9.57□□□□□ -0.88
CHMP2A-203ENST00000597209 H3BUT2 72 aa9.53□□□□□ -0.88
CHMP2A-203ENST00000597209 Q6Q795 121 aa9.53□□□□□ -0.88
CHMP2A-203ENST00000597209 CEND1Q8N111 149 aa9.53□□□□□ -0.88
CHMP2A-203ENST00000597209 A0A1B0GX51 115 aa9.52□□□□□ -0.89
CHMP2A-203ENST00000597209 MT1HP80294 61 aa9.52□□□□□ -0.89
CHMP2A-203ENST00000597209 LCE2DQ5TA82 110 aaPredicted RBP9.52□□□□□ -0.89
CHMP2A-203ENST00000597209 FAM218AQ96MZ4 157 aa9.52□□□□□ -0.89
CHMP2A-203ENST00000597209 TMEM238LA0A1B0GVL6 79 aa9.51□□□□□ -0.89
CHMP2A-203ENST00000597209 A6NJY4 79 aa9.51□□□□□ -0.89
CHMP2A-203ENST00000597209 LST1O00453 97 aa9.5□□□□□ -0.89
CHMP2A-203ENST00000597209 GHRHP01286 108 aa9.5□□□□□ -0.89
CHMP2A-203ENST00000597209 NDUFV3P56181 108 aaKnown RBP9.5□□□□□ -0.89
CHMP2A-203ENST00000597209 PRO1854Q9UHT4 67 aa9.5□□□□□ -0.89
CHMP2A-203ENST00000597209 TEN1Q86WV5 123 aa9.49□□□□□ -0.89
CHMP2A-203ENST00000597209 SS18L2Q9UHA2 77 aa9.49□□□□□ -0.89
CHMP2A-203ENST00000597209 KRTAP9-6A0A140TA67 174 aa9.47□□□□□ -0.89
CHMP2A-203ENST00000597209 Q75L30 129 aa9.46□□□□□ -0.9
CHMP2A-203ENST00000597209 FXYD2P54710 66 aa9.45□□□□□ -0.9
CHMP2A-203ENST00000597209 OBSCN-AS1Q96MR7 158 aa9.45□□□□□ -0.9
CHMP2A-203ENST00000597209 H3BMG7 143 aa9.43□□□□□ -0.9
CHMP2A-203ENST00000597209 TRIAP1O43715 76 aa9.42□□□□□ -0.9
CHMP2A-203ENST00000597209 ATP11AUNQ6ZP68 121 aa9.42□□□□□ -0.9
CHMP2A-203ENST00000597209 FABP2P12104 132 aa9.41□□□□□ -0.9
CHMP2A-203ENST00000597209 A0A087WSZ3 146 aa9.4□□□□□ -0.9
CHMP2A-203ENST00000597209 PYY3Q5JQD4 70 aa9.4□□□□□ -0.9
CHMP2A-203ENST00000597209 HSD52Q0P140 79 aa9.39□□□□□ -0.91
CHMP2A-203ENST00000597209 H3BQ85 93 aa9.38□□□□□ -0.91
CHMP2A-203ENST00000597209 COX6B2Q6YFQ2 88 aa9.38□□□□□ -0.91
CHMP2A-203ENST00000597209 Q96NJ1 140 aa9.38□□□□□ -0.91
CHMP2A-203ENST00000597209 LORP23490 312 aaPredicted RBP9.36□□□□□ -0.91
CHMP2A-203ENST00000597209 A0A1W2PNM2 257 aa9.35□□□□□ -0.91
CHMP2A-203ENST00000597209 KRTAP10-6P60371 365 aaPredicted RBP9.35□□□□□ -0.91
CHMP2A-203ENST00000597209 C20orf166-AS1Q96NR2 134 aa9.35□□□□□ -0.91
CHMP2A-203ENST00000597209 DNAL4O96015 105 aa9.34□□□□□ -0.91
CHMP2A-203ENST00000597209 ORMDL1Q9P0S3 153 aa9.34□□□□□ -0.91
CHMP2A-203ENST00000597209 A8MUU9 505 aa9.33□□□□□ -0.92
CHMP2A-203ENST00000597209 COX6CP09669 75 aa9.33□□□□□ -0.92
CHMP2A-203ENST00000597209 PSMB2P49721 201 aa9.32□□□□□ -0.92
CHMP2A-203ENST00000597209 ANKRD29Q8N6D5 301 aa9.32□□□□□ -0.92
CHMP2A-203ENST00000597209 TRBV7-4A0A0J9YYF1 115 aa9.31□□□□□ -0.92
CHMP2A-203ENST00000597209 TMEM256-PLSCR3K7ERE1 68 aa9.31□□□□□ -0.92
CHMP2A-203ENST00000597209 K7ERJ3 54 aa9.31□□□□□ -0.92
CHMP2A-203ENST00000597209 M0R2T5 61 aa9.31□□□□□ -0.92
CHMP2A-203ENST00000597209 UQCR10Q9UDW1 63 aa9.3□□□□□ -0.92
CHMP2A-203ENST00000597209 FLGP20930 4061 aaPredicted RBP9.28□□□□□ -0.92
CHMP2A-203ENST00000597209 UBE2V1Q13404 147 aa9.26□□□□□ -0.93
CHMP2A-203ENST00000597209 DSCR10P59022 87 aa9.25□□□□□ -0.93
CHMP2A-203ENST00000597209 SIGMAR1Q99720 223 aa9.25□□□□□ -0.93
CHMP2A-203ENST00000597209 CRCT1Q9UGL9 99 aa9.24□□□□□ -0.93
CHMP2A-203ENST00000597209 TRACP01848 142 aa9.23□□□□□ -0.93
CHMP2A-203ENST00000597209 IGKV4-1P06312 121 aa9.23□□□□□ -0.93
CHMP2A-203ENST00000597209 LINC00313P59037 77 aa9.23□□□□□ -0.93
CHMP2A-203ENST00000597209 LINC00472Q9H8W2 130 aa9.22□□□□□ -0.93
CHMP2A-203ENST00000597209 A0A1B0GV72 72 aa9.21□□□□□ -0.94
CHMP2A-203ENST00000597209 CCKP06307 115 aa9.21□□□□□ -0.94
CHMP2A-203ENST00000597209 KRTAP16-1A8MUX0 517 aa9.19□□□□□ -0.94
CHMP2A-203ENST00000597209 TMA7Q9Y2S6 64 aaKnown RBP9.19□□□□□ -0.94
CHMP2A-203ENST00000597209 FSIP2Q5CZC0 6907 aa9.18□□□□□ -0.94
CHMP2A-203ENST00000597209 SCGB1C2P0DMR2 95 aa9.18□□□□□ -0.94
CHMP2A-203ENST00000597209 TRBV20-1A0A075B6N2 111 aa9.17□□□□□ -0.94
CHMP2A-203ENST00000597209 RBM3P98179 157 aaKnown RBP9.16□□□□□ -0.94
CHMP2A-203ENST00000597209 DEFB116Q30KQ4 102 aa9.14□□□□□ -0.95
CHMP2A-203ENST00000597209 NOTCH2NLQ7Z3S9 236 aa9.14□□□□□ -0.95
CHMP2A-203ENST00000597209 DSCR8Q96T75 97 aa9.13□□□□□ -0.95
CHMP2A-203ENST00000597209 C21orf62-AS1Q17RA5 79 aa9.12□□□□□ -0.95
CHMP2A-203ENST00000597209 IGHV6-1A0A0B4J1U7 121 aa9.1□□□□□ -0.95
CHMP2A-203ENST00000597209 BAALC-AS2P0C853 105 aa9.1□□□□□ -0.95
CHMP2A-203ENST00000597209 VPS25Q9BRG1 176 aa9.1□□□□□ -0.95
CHMP2A-203ENST00000597209 C8orf87E5RJ46 101 aa9.09□□□□□ -0.95
CHMP2A-203ENST00000597209 A0A1B0GVX0 72 aa9.08□□□□□ -0.96
CHMP2A-203ENST00000597209 C9JAW5 83 aa9.07□□□□□ -0.96
CHMP2A-203ENST00000597209 J3KT08 172 aa9.05□□□□□ -0.96
CHMP2A-203ENST00000597209 M0R143 59 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms