RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 HIST3H2BBQ8N257 126 aa8.43□□□□□ -1.06
LIM2-202ENST00000596399 TRAV13-2A0A0B4J235 113 aa8.42□□□□□ -1.06
LIM2-202ENST00000596399 Q6ZVH6 145 aa8.42□□□□□ -1.06
LIM2-202ENST00000596399 S100A2P29034 98 aa8.41□□□□□ -1.06
LIM2-202ENST00000596399 NHP2Q9NX24 153 aaKnown RBP8.41□□□□□ -1.06
LIM2-202ENST00000596399 C12orf57Q99622 126 aa8.4□□□□□ -1.06
LIM2-202ENST00000596399 HIST1H2BLQ99880 126 aa8.4□□□□□ -1.06
LIM2-202ENST00000596399 C20orf202A1L168 122 aa8.39□□□□□ -1.07
LIM2-202ENST00000596399 F8WEM9 126 aa8.39□□□□□ -1.07
LIM2-202ENST00000596399 SNRPEP62304 92 aaKnown RBP8.39□□□□□ -1.07
LIM2-202ENST00000596399 Q6Q795 121 aa8.39□□□□□ -1.07
LIM2-202ENST00000596399 LINC00575Q6W349 94 aa8.39□□□□□ -1.07
LIM2-202ENST00000596399 Q6ZQY7 126 aa8.39□□□□□ -1.07
LIM2-202ENST00000596399 OBSCN-AS1Q96MR7 158 aa8.39□□□□□ -1.07
LIM2-202ENST00000596399 IGFL1Q6UW32 110 aa8.38□□□□□ -1.07
LIM2-202ENST00000596399 USH2AO75445 5202 aa8.37□□□□□ -1.07
LIM2-202ENST00000596399 TRBV7-7A0A0K0K1E9 115 aa8.36□□□□□ -1.07
LIM2-202ENST00000596399 hADV29S1A0JD25 119 aa8.35□□□□□ -1.07
LIM2-202ENST00000596399 VAMP3Q15836 100 aa8.35□□□□□ -1.07
LIM2-202ENST00000596399 CLEC2BQ92478 149 aa8.34□□□□□ -1.07
LIM2-202ENST00000596399 OCIAD2Q56VL3 154 aa8.33□□□□□ -1.08
LIM2-202ENST00000596399 Q6JHZ5 121 aa8.33□□□□□ -1.08
LIM2-202ENST00000596399 SSPOA2VEC9 5147 aa8.32□□□□□ -1.08
LIM2-202ENST00000596399 ATP11AUNQ6ZP68 121 aa8.32□□□□□ -1.08
LIM2-202ENST00000596399 Q75L30 129 aa8.32□□□□□ -1.08
LIM2-202ENST00000596399 PCP4L1A6NKN8 68 aa8.3□□□□□ -1.08
LIM2-202ENST00000596399 H3BUT2 72 aa8.3□□□□□ -1.08
LIM2-202ENST00000596399 Q96NJ1 140 aa8.28□□□□□ -1.08
LIM2-202ENST00000596399 SCGB1D1O95968 90 aa8.27□□□□□ -1.09
LIM2-202ENST00000596399 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.26□□□□□ -1.09
LIM2-202ENST00000596399 LST1O00453 97 aa8.25□□□□□ -1.09
LIM2-202ENST00000596399 SNHG12Q9BXW3 62 aa8.25□□□□□ -1.09
LIM2-202ENST00000596399 HSBP1L1C9JCN9 74 aa8.24□□□□□ -1.09
LIM2-202ENST00000596399 KRTAP9-8Q9BYQ0 159 aa8.24□□□□□ -1.09
LIM2-202ENST00000596399 PYY3Q5JQD4 70 aa8.2□□□□□ -1.1
LIM2-202ENST00000596399 BVES-AS1Q5T3Y7 98 aa8.2□□□□□ -1.1
LIM2-202ENST00000596399 PPDPFLQ8WWR9 84 aa8.2□□□□□ -1.1
LIM2-202ENST00000596399 C20orf166-AS1Q96NR2 134 aa8.19□□□□□ -1.1
LIM2-202ENST00000596399 HIST1H4GQ99525 98 aa8.19□□□□□ -1.1
LIM2-202ENST00000596399 A8MUU9 505 aa8.18□□□□□ -1.1
LIM2-202ENST00000596399 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.18□□□□□ -1.1
LIM2-202ENST00000596399 FAM218AQ96MZ4 157 aa8.16□□□□□ -1.1
LIM2-202ENST00000596399 A0A087WSZ3 146 aa8.15□□□□□ -1.1
LIM2-202ENST00000596399 TSTD3H0UI37 97 aa8.15□□□□□ -1.1
LIM2-202ENST00000596399 DSCR10P59022 87 aa8.15□□□□□ -1.1
LIM2-202ENST00000596399 KRTAP9-7A8MTY7 169 aa8.14□□□□□ -1.11
LIM2-202ENST00000596399 KRTAP16-1A8MUX0 517 aa8.14□□□□□ -1.11
LIM2-202ENST00000596399 CFC1P0CG37 223 aa8.14□□□□□ -1.11
LIM2-202ENST00000596399 TEN1Q86WV5 123 aa8.14□□□□□ -1.11
LIM2-202ENST00000596399 SS18L2Q9UHA2 77 aa8.14□□□□□ -1.11
LIM2-202ENST00000596399 PAM16Q9Y3D7 125 aa8.14□□□□□ -1.11
LIM2-202ENST00000596399 COX8AP10176 69 aa8.13□□□□□ -1.11
LIM2-202ENST00000596399 NDUFV3P56181 108 aaKnown RBP8.13□□□□□ -1.11
LIM2-202ENST00000596399 VAMP8Q9BV40 100 aa8.13□□□□□ -1.11
LIM2-202ENST00000596399 FCGBPQ9Y6R7 5405 aaPredicted RBP8.13□□□□□ -1.11
LIM2-202ENST00000596399 SPATA45Q537H7 98 aa8.12□□□□□ -1.11
LIM2-202ENST00000596399 TRBV20-1A0A075B6N2 111 aa8.11□□□□□ -1.11
LIM2-202ENST00000596399 C14orf144Q96I85 54 aa8.11□□□□□ -1.11
LIM2-202ENST00000596399 H3BMG7 143 aa8.09□□□□□ -1.11
LIM2-202ENST00000596399 DLEU1O43261 78 aa8.09□□□□□ -1.11
LIM2-202ENST00000596399 MT2AP02795 61 aa8.09□□□□□ -1.11
LIM2-202ENST00000596399 RAB37Q96AX2 223 aa8.09□□□□□ -1.11
LIM2-202ENST00000596399 A0A1W2PNM2 257 aa8.07□□□□□ -1.12
LIM2-202ENST00000596399 H0YGX0 51 aa8.06□□□□□ -1.12
LIM2-202ENST00000596399 FABP2P12104 132 aa8.06□□□□□ -1.12
LIM2-202ENST00000596399 SIGMAR1Q99720 223 aa8.06□□□□□ -1.12
LIM2-202ENST00000596399 NOTCH2NLQ7Z3S9 236 aa8.05□□□□□ -1.12
LIM2-202ENST00000596399 SNCGO76070 127 aa8.04□□□□□ -1.12
LIM2-202ENST00000596399 MT1FP04733 61 aa8.04□□□□□ -1.12
LIM2-202ENST00000596399 A0A0B4J2C4 111 aa8.03□□□□□ -1.12
LIM2-202ENST00000596399 FAM236DA0A1B0GTK5 79 aa8.03□□□□□ -1.12
LIM2-202ENST00000596399 LCE2BO14633 110 aa8.03□□□□□ -1.12
LIM2-202ENST00000596399 FAM236CP0DP71 79 aa8.03□□□□□ -1.12
LIM2-202ENST00000596399 C2orf91Q6ZV80 131 aa8.03□□□□□ -1.12
LIM2-202ENST00000596399 A0A1B0GV72 72 aa8.02□□□□□ -1.13
LIM2-202ENST00000596399 LINC00313P59037 77 aa8.02□□□□□ -1.13
LIM2-202ENST00000596399 HIGD1BQ9P298 99 aa8.02□□□□□ -1.13
LIM2-202ENST00000596399 HRES1P13985 223 aa8.01□□□□□ -1.13
LIM2-202ENST00000596399 DEFB116Q30KQ4 102 aa8.01□□□□□ -1.13
LIM2-202ENST00000596399 IGKV4-1P06312 121 aa8□□□□□ -1.13
LIM2-202ENST00000596399 MPLKIPQ8TAP9 179 aa8□□□□□ -1.13
LIM2-202ENST00000596399 KRTAP19-1Q8IUB9 90 aa7.99□□□□□ -1.13
LIM2-202ENST00000596399 KRTAP9-3Q9BYQ3 159 aa7.98□□□□□ -1.13
LIM2-202ENST00000596399 TRIAP1O43715 76 aa7.97□□□□□ -1.13
LIM2-202ENST00000596399 A0A1B0GX51 115 aa7.96□□□□□ -1.14
LIM2-202ENST00000596399 M0R143 59 aa7.96□□□□□ -1.14
LIM2-202ENST00000596399 KRTAP10-10P60014 251 aa7.96□□□□□ -1.14
LIM2-202ENST00000596399 CEND1Q8N111 149 aa7.96□□□□□ -1.14
LIM2-202ENST00000596399 PRO1854Q9UHT4 67 aa7.96□□□□□ -1.14
LIM2-202ENST00000596399 ANKRD29Q8N6D5 301 aa7.95□□□□□ -1.14
LIM2-202ENST00000596399 TRBV7-4A0A0J9YYF1 115 aa7.94□□□□□ -1.14
LIM2-202ENST00000596399 FXYD2P54710 66 aa7.94□□□□□ -1.14
LIM2-202ENST00000596399 RBM12B-AS1Q9P1G2 102 aa7.94□□□□□ -1.14
LIM2-202ENST00000596399 IGHV6-1A0A0B4J1U7 121 aa7.93□□□□□ -1.14
LIM2-202ENST00000596399 LINC00472Q9H8W2 130 aa7.93□□□□□ -1.14
LIM2-202ENST00000596399 UQCR10Q9UDW1 63 aa7.93□□□□□ -1.14
LIM2-202ENST00000596399 GHRHP01286 108 aa7.92□□□□□ -1.14
LIM2-202ENST00000596399 A0A1B0GV90 55 aa7.9□□□□□ -1.14
LIM2-202ENST00000596399 HSD52Q0P140 79 aa7.9□□□□□ -1.14
LIM2-202ENST00000596399 TMEM238LA0A1B0GVL6 79 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms