RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 PAM16Q9Y3D7 125 aa5.57□□□□□ -1.52
SHKBP1-210ENST00000595874 H3BUT2 72 aa5.56□□□□□ -1.52
SHKBP1-210ENST00000595874 COX8AP10176 69 aa5.55□□□□□ -1.52
SHKBP1-210ENST00000595874 IGFL1Q6UW32 110 aa5.55□□□□□ -1.52
SHKBP1-210ENST00000595874 SPATA45Q537H7 98 aa5.54□□□□□ -1.52
SHKBP1-210ENST00000595874 RAB37Q96AX2 223 aa5.54□□□□□ -1.52
SHKBP1-210ENST00000595874 TCL1BO95988 128 aa5.53□□□□□ -1.52
SHKBP1-210ENST00000595874 CFC1BP0CG36 223 aa5.53□□□□□ -1.52
SHKBP1-210ENST00000595874 CFC1P0CG37 223 aa5.53□□□□□ -1.52
SHKBP1-210ENST00000595874 LCE2CQ5TA81 110 aa5.53□□□□□ -1.52
SHKBP1-210ENST00000595874 OCIAD2Q56VL3 154 aa5.52□□□□□ -1.53
SHKBP1-210ENST00000595874 SNHG12Q9BXW3 62 aa5.52□□□□□ -1.53
SHKBP1-210ENST00000595874 TRBV7-7A0A0K0K1E9 115 aa5.51□□□□□ -1.53
SHKBP1-210ENST00000595874 A0A1B0GV72 72 aa5.51□□□□□ -1.53
SHKBP1-210ENST00000595874 RPL37P61927 97 aaKnown RBP5.51□□□□□ -1.53
SHKBP1-210ENST00000595874 KRTAP19-2Q3LHN2 52 aa5.51□□□□□ -1.53
SHKBP1-210ENST00000595874 CLEC2BQ92478 149 aa5.51□□□□□ -1.53
SHKBP1-210ENST00000595874 FAM218AQ96MZ4 157 aa5.51□□□□□ -1.53
SHKBP1-210ENST00000595874 BVES-AS1Q5T3Y7 98 aa5.5□□□□□ -1.53
SHKBP1-210ENST00000595874 Q5XG85 94 aa5.5□□□□□ -1.53
SHKBP1-210ENST00000595874 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.5□□□□□ -1.53
SHKBP1-210ENST00000595874 C2orf91Q6ZV80 131 aa5.5□□□□□ -1.53
SHKBP1-210ENST00000595874 VAMP8Q9BV40 100 aa5.5□□□□□ -1.53
SHKBP1-210ENST00000595874 MT1HP80294 61 aa5.49□□□□□ -1.53
SHKBP1-210ENST00000595874 OBSCN-AS1Q96MR7 158 aa5.49□□□□□ -1.53
SHKBP1-210ENST00000595874 KRTAP9-6A0A140TA67 174 aa5.48□□□□□ -1.53
SHKBP1-210ENST00000595874 Q6JHZ5 121 aa5.48□□□□□ -1.53
SHKBP1-210ENST00000595874 DLEU1O43261 78 aa5.47□□□□□ -1.53
SHKBP1-210ENST00000595874 Q6Q795 121 aa5.47□□□□□ -1.53
SHKBP1-210ENST00000595874 FABP2P12104 132 aa5.46□□□□□ -1.54
SHKBP1-210ENST00000595874 FXYD2P54710 66 aa5.46□□□□□ -1.54
SHKBP1-210ENST00000595874 COX6B2Q6YFQ2 88 aa5.46□□□□□ -1.54
SHKBP1-210ENST00000595874 M0R2T5 61 aa5.45□□□□□ -1.54
SHKBP1-210ENST00000595874 LST1O00453 97 aa5.45□□□□□ -1.54
SHKBP1-210ENST00000595874 NDUFV3P56181 108 aaKnown RBP5.45□□□□□ -1.54
SHKBP1-210ENST00000595874 CEND1Q8N111 149 aa5.45□□□□□ -1.54
SHKBP1-210ENST00000595874 A0A0B4J2C4 111 aa5.44□□□□□ -1.54
SHKBP1-210ENST00000595874 K7ERJ3 54 aa5.44□□□□□ -1.54
SHKBP1-210ENST00000595874 Q96NJ1 140 aa5.44□□□□□ -1.54
SHKBP1-210ENST00000595874 HIGD1BQ9P298 99 aa5.44□□□□□ -1.54
SHKBP1-210ENST00000595874 TMA7Q9Y2S6 64 aaKnown RBP5.43□□□□□ -1.54
SHKBP1-210ENST00000595874 A0A087WSZ3 146 aa5.42□□□□□ -1.54
SHKBP1-210ENST00000595874 H0YGX0 51 aa5.42□□□□□ -1.54
SHKBP1-210ENST00000595874 H3BMG7 143 aa5.42□□□□□ -1.54
SHKBP1-210ENST00000595874 TRIAP1O43715 76 aa5.42□□□□□ -1.54
SHKBP1-210ENST00000595874 PRO1854Q9UHT4 67 aa5.42□□□□□ -1.54
SHKBP1-210ENST00000595874 PSMB2P49721 201 aa5.41□□□□□ -1.54
SHKBP1-210ENST00000595874 DSCR10P59022 87 aa5.41□□□□□ -1.54
SHKBP1-210ENST00000595874 PPDPFLQ8WWR9 84 aa5.41□□□□□ -1.54
SHKBP1-210ENST00000595874 SNCGO76070 127 aa5.4□□□□□ -1.54
SHKBP1-210ENST00000595874 ATP11AUNQ6ZP68 121 aa5.4□□□□□ -1.54
SHKBP1-210ENST00000595874 FSIP2Q5CZC0 6907 aa5.4□□□□□ -1.55
SHKBP1-210ENST00000595874 TMEM238LA0A1B0GVL6 79 aa5.39□□□□□ -1.55
SHKBP1-210ENST00000595874 A6NJY4 79 aa5.39□□□□□ -1.55
SHKBP1-210ENST00000595874 DEFB116Q30KQ4 102 aa5.39□□□□□ -1.55
SHKBP1-210ENST00000595874 PYY3Q5JQD4 70 aa5.39□□□□□ -1.55
SHKBP1-210ENST00000595874 LCE2DQ5TA82 110 aaPredicted RBP5.39□□□□□ -1.55
SHKBP1-210ENST00000595874 SIGMAR1Q99720 223 aa5.39□□□□□ -1.55
SHKBP1-210ENST00000595874 FLGP20930 4061 aaPredicted RBP5.38□□□□□ -1.55
SHKBP1-210ENST00000595874 A0A1W2PNM2 257 aa5.38□□□□□ -1.55
SHKBP1-210ENST00000595874 KRTAP10-6P60371 365 aaPredicted RBP5.38□□□□□ -1.55
SHKBP1-210ENST00000595874 TEN1Q86WV5 123 aa5.38□□□□□ -1.55
SHKBP1-210ENST00000595874 SS18L2Q9UHA2 77 aa5.37□□□□□ -1.55
SHKBP1-210ENST00000595874 DNAL4O96015 105 aa5.36□□□□□ -1.55
SHKBP1-210ENST00000595874 HSD52Q0P140 79 aa5.36□□□□□ -1.55
SHKBP1-210ENST00000595874 Q75L30 129 aa5.36□□□□□ -1.55
SHKBP1-210ENST00000595874 LORP23490 312 aaPredicted RBP5.35□□□□□ -1.55
SHKBP1-210ENST00000595874 IGKV4-1P06312 121 aa5.34□□□□□ -1.55
SHKBP1-210ENST00000595874 ANKRD29Q8N6D5 301 aa5.34□□□□□ -1.55
SHKBP1-210ENST00000595874 VPS25Q9BRG1 176 aa5.34□□□□□ -1.55
SHKBP1-210ENST00000595874 ORMDL1Q9P0S3 153 aa5.34□□□□□ -1.55
SHKBP1-210ENST00000595874 A0A1B0GX51 115 aa5.33□□□□□ -1.56
SHKBP1-210ENST00000595874 CRCT1Q9UGL9 99 aa5.33□□□□□ -1.56
SHKBP1-210ENST00000595874 NOTCH2NLQ7Z3S9 236 aa5.32□□□□□ -1.56
SHKBP1-210ENST00000595874 SCGB1C2P0DMR2 95 aa5.31□□□□□ -1.56
SHKBP1-210ENST00000595874 NAA38Q9BRA0 125 aaKnown RBP5.31□□□□□ -1.56
SHKBP1-210ENST00000595874 A8MUU9 505 aa5.3□□□□□ -1.56
SHKBP1-210ENST00000595874 C20orf166-AS1Q96NR2 134 aa5.3□□□□□ -1.56
SHKBP1-210ENST00000595874 UQCR10Q9UDW1 63 aa5.3□□□□□ -1.56
SHKBP1-210ENST00000595874 IGHV6-1A0A0B4J1U7 121 aa5.29□□□□□ -1.56
SHKBP1-210ENST00000595874 KRTAP16-1A8MUX0 517 aa5.29□□□□□ -1.56
SHKBP1-210ENST00000595874 GHRHP01286 108 aa5.29□□□□□ -1.56
SHKBP1-210ENST00000595874 TRACP01848 142 aa5.29□□□□□ -1.56
SHKBP1-210ENST00000595874 CCKP06307 115 aa5.29□□□□□ -1.56
SHKBP1-210ENST00000595874 COX6CP09669 75 aa5.29□□□□□ -1.56
SHKBP1-210ENST00000595874 LINC00313P59037 77 aa5.29□□□□□ -1.56
SHKBP1-210ENST00000595874 TMEM256-PLSCR3K7ERE1 68 aa5.27□□□□□ -1.57
SHKBP1-210ENST00000595874 TRBV7-4A0A0J9YYF1 115 aa5.26□□□□□ -1.57
SHKBP1-210ENST00000595874 FAM236DA0A1B0GTK5 79 aa5.26□□□□□ -1.57
SHKBP1-210ENST00000595874 FAM236CP0DP71 79 aa5.26□□□□□ -1.57
SHKBP1-210ENST00000595874 TRBV20-1A0A075B6N2 111 aa5.25□□□□□ -1.57
SHKBP1-210ENST00000595874 BAALC-AS2P0C853 105 aa5.23□□□□□ -1.57
SHKBP1-210ENST00000595874 UBE2V1Q13404 147 aa5.23□□□□□ -1.57
SHKBP1-210ENST00000595874 LINC00472Q9H8W2 130 aa5.23□□□□□ -1.57
SHKBP1-210ENST00000595874 RBM3P98179 157 aaKnown RBP5.22□□□□□ -1.57
SHKBP1-210ENST00000595874 DSCR8Q96T75 97 aa5.22□□□□□ -1.57
SHKBP1-210ENST00000595874 A0A1B0GVX0 72 aa5.2□□□□□ -1.58
SHKBP1-210ENST00000595874 H3BQ85 93 aa5.2□□□□□ -1.58
SHKBP1-210ENST00000595874 BATFQ16520 125 aa5.19□□□□□ -1.58
SHKBP1-210ENST00000595874 C9JAW5 83 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms