RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 C12orf57Q99622 126 aa12.71□□□□□ -0.37
LSM4-204ENST00000594828 COX8AP10176 69 aa12.69□□□□□ -0.38
LSM4-204ENST00000594828 Q6JHZ5 121 aa12.67□□□□□ -0.38
LSM4-204ENST00000594828 BVES-AS1Q5T3Y7 98 aa12.66□□□□□ -0.38
LSM4-204ENST00000594828 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.65□□□□□ -0.38
LSM4-204ENST00000594828 DLEU1O43261 78 aa12.64□□□□□ -0.39
LSM4-204ENST00000594828 OCIAD2Q56VL3 154 aa12.64□□□□□ -0.39
LSM4-204ENST00000594828 CLEC2BQ92478 149 aa12.63□□□□□ -0.39
LSM4-204ENST00000594828 LCE2CQ5TA81 110 aa12.62□□□□□ -0.39
LSM4-204ENST00000594828 IGFL1Q6UW32 110 aa12.62□□□□□ -0.39
LSM4-204ENST00000594828 PPDPFLQ8WWR9 84 aa12.6□□□□□ -0.39
LSM4-204ENST00000594828 TRBV7-7A0A0K0K1E9 115 aa12.59□□□□□ -0.39
LSM4-204ENST00000594828 RPL37P61927 97 aaKnown RBP12.59□□□□□ -0.39
LSM4-204ENST00000594828 KRTAP19-2Q3LHN2 52 aa12.59□□□□□ -0.39
LSM4-204ENST00000594828 C14orf144Q96I85 54 aa12.59□□□□□ -0.39
LSM4-204ENST00000594828 SNHG12Q9BXW3 62 aa12.59□□□□□ -0.39
LSM4-204ENST00000594828 CFC1BP0CG36 223 aa12.57□□□□□ -0.4
LSM4-204ENST00000594828 CFC1P0CG37 223 aa12.57□□□□□ -0.4
LSM4-204ENST00000594828 RAB37Q96AX2 223 aa12.56□□□□□ -0.4
LSM4-204ENST00000594828 HIGD1BQ9P298 99 aa12.55□□□□□ -0.4
LSM4-204ENST00000594828 PAM16Q9Y3D7 125 aa12.55□□□□□ -0.4
LSM4-204ENST00000594828 SPATA45Q537H7 98 aa12.54□□□□□ -0.4
LSM4-204ENST00000594828 SNCGO76070 127 aa12.52□□□□□ -0.41
LSM4-204ENST00000594828 A0A0B4J2C4 111 aa12.5□□□□□ -0.41
LSM4-204ENST00000594828 H0YGX0 51 aa12.5□□□□□ -0.41
LSM4-204ENST00000594828 H3BUT2 72 aa12.5□□□□□ -0.41
LSM4-204ENST00000594828 VAMP8Q9BV40 100 aa12.49□□□□□ -0.41
LSM4-204ENST00000594828 MT1HP80294 61 aa12.48□□□□□ -0.41
LSM4-204ENST00000594828 C2orf91Q6ZV80 131 aa12.48□□□□□ -0.41
LSM4-204ENST00000594828 KRTAP9-6A0A140TA67 174 aa12.47□□□□□ -0.41
LSM4-204ENST00000594828 LST1O00453 97 aa12.45□□□□□ -0.42
LSM4-204ENST00000594828 FAM218AQ96MZ4 157 aa12.45□□□□□ -0.42
LSM4-204ENST00000594828 LCE2DQ5TA82 110 aaPredicted RBP12.44□□□□□ -0.42
LSM4-204ENST00000594828 CEND1Q8N111 149 aa12.43□□□□□ -0.42
LSM4-204ENST00000594828 NDUFV3P56181 108 aaKnown RBP12.42□□□□□ -0.42
LSM4-204ENST00000594828 OBSCN-AS1Q96MR7 158 aa12.42□□□□□ -0.42
LSM4-204ENST00000594828 PRO1854Q9UHT4 67 aa12.41□□□□□ -0.42
LSM4-204ENST00000594828 TMEM238LA0A1B0GVL6 79 aa12.4□□□□□ -0.42
LSM4-204ENST00000594828 A6NJY4 79 aa12.4□□□□□ -0.42
LSM4-204ENST00000594828 Q6Q795 121 aa12.4□□□□□ -0.42
LSM4-204ENST00000594828 TEN1Q86WV5 123 aa12.39□□□□□ -0.43
LSM4-204ENST00000594828 SS18L2Q9UHA2 77 aa12.39□□□□□ -0.43
LSM4-204ENST00000594828 A0A1B0GX51 115 aa12.37□□□□□ -0.43
LSM4-204ENST00000594828 GHRHP01286 108 aa12.37□□□□□ -0.43
LSM4-204ENST00000594828 COX6B2Q6YFQ2 88 aa12.36□□□□□ -0.43
LSM4-204ENST00000594828 ATP11AUNQ6ZP68 121 aa12.36□□□□□ -0.43
LSM4-204ENST00000594828 Q75L30 129 aa12.36□□□□□ -0.43
LSM4-204ENST00000594828 H3BMG7 143 aa12.35□□□□□ -0.43
LSM4-204ENST00000594828 FXYD2P54710 66 aa12.35□□□□□ -0.43
LSM4-204ENST00000594828 FABP2P12104 132 aa12.34□□□□□ -0.43
LSM4-204ENST00000594828 A0A087WSZ3 146 aa12.31□□□□□ -0.44
LSM4-204ENST00000594828 Q96NJ1 140 aa12.31□□□□□ -0.44
LSM4-204ENST00000594828 TRIAP1O43715 76 aa12.3□□□□□ -0.44
LSM4-204ENST00000594828 M0R2T5 61 aa12.29□□□□□ -0.44
LSM4-204ENST00000594828 KRTAP10-6P60371 365 aaPredicted RBP12.26□□□□□ -0.45
LSM4-204ENST00000594828 LORP23490 312 aaPredicted RBP12.25□□□□□ -0.45
LSM4-204ENST00000594828 HSD52Q0P140 79 aa12.24□□□□□ -0.45
LSM4-204ENST00000594828 PYY3Q5JQD4 70 aa12.24□□□□□ -0.45
LSM4-204ENST00000594828 A0A1W2PNM2 257 aa12.22□□□□□ -0.45
LSM4-204ENST00000594828 DNAL4O96015 105 aa12.22□□□□□ -0.45
LSM4-204ENST00000594828 PSMB2P49721 201 aa12.22□□□□□ -0.45
LSM4-204ENST00000594828 C20orf166-AS1Q96NR2 134 aa12.21□□□□□ -0.45
LSM4-204ENST00000594828 ORMDL1Q9P0S3 153 aa12.21□□□□□ -0.45
LSM4-204ENST00000594828 H3BQ85 93 aa12.19□□□□□ -0.46
LSM4-204ENST00000594828 K7ERJ3 54 aa12.19□□□□□ -0.46
LSM4-204ENST00000594828 ANKRD29Q8N6D5 301 aa12.19□□□□□ -0.46
LSM4-204ENST00000594828 A8MUU9 505 aa12.18□□□□□ -0.46
LSM4-204ENST00000594828 COX6CP09669 75 aa12.18□□□□□ -0.46
LSM4-204ENST00000594828 CRCT1Q9UGL9 99 aa12.16□□□□□ -0.46
LSM4-204ENST00000594828 FLGP20930 4061 aaPredicted RBP12.16□□□□□ -0.46
LSM4-204ENST00000594828 A0A1B0GV72 72 aa12.15□□□□□ -0.46
LSM4-204ENST00000594828 TMEM256-PLSCR3K7ERE1 68 aa12.15□□□□□ -0.46
LSM4-204ENST00000594828 SIGMAR1Q99720 223 aa12.15□□□□□ -0.46
LSM4-204ENST00000594828 TRBV7-4A0A0J9YYF1 115 aa12.14□□□□□ -0.47
LSM4-204ENST00000594828 DSCR10P59022 87 aa12.14□□□□□ -0.47
LSM4-204ENST00000594828 UQCR10Q9UDW1 63 aa12.11□□□□□ -0.47
LSM4-204ENST00000594828 IGKV4-1P06312 121 aa12.1□□□□□ -0.47
LSM4-204ENST00000594828 FSIP2Q5CZC0 6907 aa12.08□□□□□ -0.48
LSM4-204ENST00000594828 LINC00313P59037 77 aa12.08□□□□□ -0.48
LSM4-204ENST00000594828 CCKP06307 115 aa12.06□□□□□ -0.48
LSM4-204ENST00000594828 UBE2V1Q13404 147 aa12.06□□□□□ -0.48
LSM4-204ENST00000594828 TMA7Q9Y2S6 64 aaKnown RBP12.05□□□□□ -0.48
LSM4-204ENST00000594828 TRACP01848 142 aa12.04□□□□□ -0.48
LSM4-204ENST00000594828 TRBV20-1A0A075B6N2 111 aa12.03□□□□□ -0.48
LSM4-204ENST00000594828 SCGB1C2P0DMR2 95 aa12.03□□□□□ -0.48
LSM4-204ENST00000594828 DEFB116Q30KQ4 102 aa12.03□□□□□ -0.48
LSM4-204ENST00000594828 LINC00472Q9H8W2 130 aa12.03□□□□□ -0.48
LSM4-204ENST00000594828 KRTAP16-1A8MUX0 517 aa12□□□□□ -0.49
LSM4-204ENST00000594828 NOTCH2NLQ7Z3S9 236 aa11.98□□□□□ -0.49
LSM4-204ENST00000594828 RBM3P98179 157 aaKnown RBP11.97□□□□□ -0.49
LSM4-204ENST00000594828 VPS25Q9BRG1 176 aa11.96□□□□□ -0.49
LSM4-204ENST00000594828 IGHV6-1A0A0B4J1U7 121 aa11.95□□□□□ -0.5
LSM4-204ENST00000594828 DSCR8Q96T75 97 aa11.94□□□□□ -0.5
LSM4-204ENST00000594828 BAALC-AS2P0C853 105 aa11.91□□□□□ -0.5
LSM4-204ENST00000594828 A0A1B0GVX0 72 aa11.86□□□□□ -0.51
LSM4-204ENST00000594828 C9JAW5 83 aa11.86□□□□□ -0.51
LSM4-204ENST00000594828 C8orf87E5RJ46 101 aa11.85□□□□□ -0.51
LSM4-204ENST00000594828 FAM236DA0A1B0GTK5 79 aa11.84□□□□□ -0.51
LSM4-204ENST00000594828 FAM236CP0DP71 79 aa11.84□□□□□ -0.51
LSM4-204ENST00000594828 C21orf62-AS1Q17RA5 79 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms