RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 ORMDL1Q9P0S3 153 aa6.47□□□□□ -1.37
USE1-204ENST00000594399 Q8N377 158 aa6.46□□□□□ -1.38
USE1-204ENST00000594399 H3BQ85 93 aa6.45□□□□□ -1.38
USE1-204ENST00000594399 K7EP34 96 aa6.45□□□□□ -1.38
USE1-204ENST00000594399 FAT3Q8TDW7 4589 aa6.45□□□□□ -1.38
USE1-204ENST00000594399 A0A087X002 238 aa6.44□□□□□ -1.38
USE1-204ENST00000594399 H3BMG7 143 aa6.44□□□□□ -1.38
USE1-204ENST00000594399 CRYGAP11844 174 aa6.44□□□□□ -1.38
USE1-204ENST00000594399 LAMTOR3Q9UHA4 124 aa6.44□□□□□ -1.38
USE1-204ENST00000594399 C9JAW5 83 aa6.43□□□□□ -1.38
USE1-204ENST00000594399 OXTP01178 125 aa6.43□□□□□ -1.38
USE1-204ENST00000594399 GTF2H5Q6ZYL4 71 aa6.43□□□□□ -1.38
USE1-204ENST00000594399 C3orf22Q8N5N4 141 aa6.43□□□□□ -1.38
USE1-204ENST00000594399 LINC01600Q96MT4 127 aa6.43□□□□□ -1.38
USE1-204ENST00000594399 IGLV9-49A0A0B4J1Y8 123 aa6.42□□□□□ -1.38
USE1-204ENST00000594399 F8WEM9 126 aa6.42□□□□□ -1.38
USE1-204ENST00000594399 TMEM256-PLSCR3K7ERE1 68 aa6.42□□□□□ -1.38
USE1-204ENST00000594399 SMIM29Q86T20 159 aa6.42□□□□□ -1.38
USE1-204ENST00000594399 PRR26Q8N8Z3 221 aa6.42□□□□□ -1.38
USE1-204ENST00000594399 BAALC-AS2P0C853 105 aa6.41□□□□□ -1.38
USE1-204ENST00000594399 MOBPQ13875 183 aa6.41□□□□□ -1.38
USE1-204ENST00000594399 KRTAP13-2Q52LG2 175 aa6.41□□□□□ -1.38
USE1-204ENST00000594399 C9orf153Q5TBE3 101 aa6.41□□□□□ -1.38
USE1-204ENST00000594399 Q8NBF4 154 aa6.41□□□□□ -1.38
USE1-204ENST00000594399 H3BT86 120 aa6.4□□□□□ -1.38
USE1-204ENST00000594399 LRP1Q07954 4544 aaKnown RBP6.4□□□□□ -1.39
USE1-204ENST00000594399 NDUFV3P56181 108 aaKnown RBP6.39□□□□□ -1.39
USE1-204ENST00000594399 UBE2V1Q13404 147 aa6.39□□□□□ -1.39
USE1-204ENST00000594399 MTURNQ8N3F0 131 aa6.39□□□□□ -1.39
USE1-204ENST00000594399 TYMSOSQ8TAI1 123 aa6.39□□□□□ -1.39
USE1-204ENST00000594399 TNXBP22105 4242 aa6.37□□□□□ -1.39
USE1-204ENST00000594399 A0A1B0GV90 55 aa6.37□□□□□ -1.39
USE1-204ENST00000594399 ANKRD29Q8N6D5 301 aa6.37□□□□□ -1.39
USE1-204ENST00000594399 IGLV8-61A0A075B6I0 122 aa6.36□□□□□ -1.39
USE1-204ENST00000594399 A0A1B0GV72 72 aa6.36□□□□□ -1.39
USE1-204ENST00000594399 KRTAP10-8P60410 259 aa6.36□□□□□ -1.39
USE1-204ENST00000594399 SSBP3-AS1Q7Z2R9 100 aa6.36□□□□□ -1.39
USE1-204ENST00000594399 MT1HL1P0DM35 61 aa6.35□□□□□ -1.39
USE1-204ENST00000594399 PRO0461Q9UI25 63 aa6.35□□□□□ -1.39
USE1-204ENST00000594399 SMCPP49901 116 aaPredicted RBP6.34□□□□□ -1.39
USE1-204ENST00000594399 Q6JHZ5 121 aa6.34□□□□□ -1.39
USE1-204ENST00000594399 JMJD7-PLA2G4BH0Y9G9 81 aa6.33□□□□□ -1.4
USE1-204ENST00000594399 LINC00304Q8N9R0 145 aa6.33□□□□□ -1.4
USE1-204ENST00000594399 F8W1H4 67 aa6.32□□□□□ -1.4
USE1-204ENST00000594399 RBM3P98179 157 aaKnown RBP6.32□□□□□ -1.4
USE1-204ENST00000594399 IGFL1Q6UW32 110 aa6.32□□□□□ -1.4
USE1-204ENST00000594399 C4orf48Q5BLP8 95 aa6.31□□□□□ -1.4
USE1-204ENST00000594399 A0A0G2JQZ4 141 aa6.3□□□□□ -1.4
USE1-204ENST00000594399 OBSCN-AS1Q96MR7 158 aa6.3□□□□□ -1.4
USE1-204ENST00000594399 DSCR8Q96T75 97 aa6.3□□□□□ -1.4
USE1-204ENST00000594399 TRBV7-4A0A0J9YYF1 115 aa6.29□□□□□ -1.4
USE1-204ENST00000594399 CD164Q04900 197 aa6.29□□□□□ -1.4
USE1-204ENST00000594399 SPAG11AQ6PDA7 123 aa6.29□□□□□ -1.4
USE1-204ENST00000594399 SPINK1P00995 79 aa6.28□□□□□ -1.4
USE1-204ENST00000594399 C14orf132Q9NPU4 83 aa6.28□□□□□ -1.4
USE1-204ENST00000594399 LOC110117498A0A087WWA1 95 aa6.27□□□□□ -1.41
USE1-204ENST00000594399 HRCT1Q6UXD1 115 aa6.27□□□□□ -1.41
USE1-204ENST00000594399 TEN1Q86WV5 123 aa6.27□□□□□ -1.41
USE1-204ENST00000594399 CCKP06307 115 aa6.26□□□□□ -1.41
USE1-204ENST00000594399 Q6Q795 121 aa6.26□□□□□ -1.41
USE1-204ENST00000594399 TRBV7-7A0A0K0K1E9 115 aa6.25□□□□□ -1.41
USE1-204ENST00000594399 PDE6GP18545 87 aa6.25□□□□□ -1.41
USE1-204ENST00000594399 RPS29P62273 56 aaKnown RBP6.25□□□□□ -1.41
USE1-204ENST00000594399 C21orf62-AS1Q17RA5 79 aa6.25□□□□□ -1.41
USE1-204ENST00000594399 ETDBQ3ZM63 59 aa6.25□□□□□ -1.41
USE1-204ENST00000594399 Q6ZQT0 140 aa6.25□□□□□ -1.41
USE1-204ENST00000594399 HMCN2Q8NDA2 5059 aa6.24□□□□□ -1.41
USE1-204ENST00000594399 A0A1W2PNM2 257 aa6.24□□□□□ -1.41
USE1-204ENST00000594399 VPS25Q9BRG1 176 aa6.24□□□□□ -1.41
USE1-204ENST00000594399 LIMD2Q9BT23 127 aa6.24□□□□□ -1.41
USE1-204ENST00000594399 A0A087WSZ3 146 aa6.21□□□□□ -1.42
USE1-204ENST00000594399 Q5XG85 94 aa6.21□□□□□ -1.42
USE1-204ENST00000594399 SS18L2Q9UHA2 77 aa6.21□□□□□ -1.42
USE1-204ENST00000594399 A0A1B0GW54 56 aa6.19□□□□□ -1.42
USE1-204ENST00000594399 ASB16-AS1Q495Z4 193 aa6.17□□□□□ -1.42
USE1-204ENST00000594399 RETNLBQ9BQ08 111 aa6.15□□□□□ -1.42
USE1-204ENST00000594399 UBR4Q5T4S7 5183 aa6.13□□□□□ -1.43
USE1-204ENST00000594399 C1orf195Q5TG92 126 aa6.13□□□□□ -1.43
USE1-204ENST00000594399 FP248Q71RG6 208 aaPredicted RBP6.12□□□□□ -1.43
USE1-204ENST00000594399 Q96NJ1 140 aa6.11□□□□□ -1.43
USE1-204ENST00000594399 PRR4Q16378 134 aa6.1□□□□□ -1.43
USE1-204ENST00000594399 NREPQ16612 68 aa6.1□□□□□ -1.43
USE1-204ENST00000594399 LINC00472Q9H8W2 130 aa6.1□□□□□ -1.43
USE1-204ENST00000594399 FAM240AA0A1B0GVK7 77 aa6.09□□□□□ -1.43
USE1-204ENST00000594399 ACYP1P07311 99 aa6.09□□□□□ -1.43
USE1-204ENST00000594399 UBL5Q9BZL1 73 aa6.09□□□□□ -1.43
USE1-204ENST00000594399 LINC00846Q9NV44 126 aa6.09□□□□□ -1.43
USE1-204ENST00000594399 J3QR89 54 aa6.08□□□□□ -1.44
USE1-204ENST00000594399 Q6ZVQ6 151 aa6.08□□□□□ -1.44
USE1-204ENST00000594399 SIGMAR1Q99720 223 aa6.08□□□□□ -1.44
USE1-204ENST00000594399 LRP2P98164 4655 aa6.07□□□□□ -1.44
USE1-204ENST00000594399 IGLV7-46A0A075B6I9 117 aa6.07□□□□□ -1.44
USE1-204ENST00000594399 IGKV4-1P06312 121 aa6.07□□□□□ -1.44
USE1-204ENST00000594399 DEFB116Q30KQ4 102 aa6.07□□□□□ -1.44
USE1-204ENST00000594399 J3KT08 172 aa6.06□□□□□ -1.44
USE1-204ENST00000594399 BPY2O14599 106 aa6.03□□□□□ -1.44
USE1-204ENST00000594399 K7ERU9 68 aa6.02□□□□□ -1.45
USE1-204ENST00000594399 TPRXLQ17RH7 258 aa6.02□□□□□ -1.45
USE1-204ENST00000594399 A8MWP4 228 aa6.01□□□□□ -1.45
USE1-204ENST00000594399 A0A1B0GVX0 72 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms