RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 IFITM2Q01629 132 aa4.99□□□□□ -1.61
ZNF558-202ENST00000593891 TRAV13-2A0A0B4J235 113 aa4.97□□□□□ -1.61
ZNF558-202ENST00000593891 KRTAP4-8A0A0G2JLE6 195 aa4.97□□□□□ -1.61
ZNF558-202ENST00000593891 NMUP48645 174 aa4.97□□□□□ -1.61
ZNF558-202ENST00000593891 NPC2P61916 151 aa4.97□□□□□ -1.61
ZNF558-202ENST00000593891 KRTAP4-8Q9BYQ9 185 aa4.97□□□□□ -1.61
ZNF558-202ENST00000593891 SMCO4Q9NRQ5 59 aa4.97□□□□□ -1.61
ZNF558-202ENST00000593891 TRBV7-6A0A0J9YX20 115 aa4.96□□□□□ -1.62
ZNF558-202ENST00000593891 A0A0J9YXY3 114 aa4.96□□□□□ -1.62
ZNF558-202ENST00000593891 KRTAP5-3Q6L8H2 238 aa4.95□□□□□ -1.62
ZNF558-202ENST00000593891 SPANXDQ9BXN6 97 aa4.95□□□□□ -1.62
ZNF558-202ENST00000593891 KRTAP12-2P59991 146 aa4.94□□□□□ -1.62
ZNF558-202ENST00000593891 OCIAD2Q56VL3 154 aa4.94□□□□□ -1.62
ZNF558-202ENST00000593891 ZCCHC13Q8WW36 166 aaKnown RBP4.94□□□□□ -1.62
ZNF558-202ENST00000593891 SIGMAR1Q99720 223 aa4.94□□□□□ -1.62
ZNF558-202ENST00000593891 EIF4EBP3O60516 100 aaPredicted RBP4.93□□□□□ -1.62
ZNF558-202ENST00000593891 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
ZNF558-202ENST00000593891 SLC51BQ86UW2 128 aa4.92□□□□□ -1.62
ZNF558-202ENST00000593891 SLC7A5P1Q8MH63 180 aa4.92□□□□□ -1.62
ZNF558-202ENST00000593891 NHP2Q9NX24 153 aaKnown RBP4.92□□□□□ -1.62
ZNF558-202ENST00000593891 LINC00518Q8N0U6 118 aa4.91□□□□□ -1.62
ZNF558-202ENST00000593891 RPS10P5Q9NQ39 176 aa4.91□□□□□ -1.62
ZNF558-202ENST00000593891 SPANXCQ9NY87 97 aa4.91□□□□□ -1.62
ZNF558-202ENST00000593891 ANAPC16Q96DE5 110 aa4.9□□□□□ -1.63
ZNF558-202ENST00000593891 A0A096LNJ9 63 aa4.87□□□□□ -1.63
ZNF558-202ENST00000593891 A4D1N5 150 aa4.87□□□□□ -1.63
ZNF558-202ENST00000593891 TSPEAR-AS2P59090 65 aa4.86□□□□□ -1.63
ZNF558-202ENST00000593891 RBM3P98179 157 aaKnown RBP4.86□□□□□ -1.63
ZNF558-202ENST00000593891 C3orf79P0CE67 100 aa4.85□□□□□ -1.63
ZNF558-202ENST00000593891 ADAMTSL4-AS1Q5T5F5 129 aa4.85□□□□□ -1.63
ZNF558-202ENST00000593891 LEPROTO15243 131 aa4.84□□□□□ -1.63
ZNF558-202ENST00000593891 MT1XP80297 61 aa4.84□□□□□ -1.63
ZNF558-202ENST00000593891 KLKP1Q107X0 134 aa4.84□□□□□ -1.63
ZNF558-202ENST00000593891 A0A087WSZ3 146 aa4.83□□□□□ -1.64
ZNF558-202ENST00000593891 C5orf47Q569G3 176 aa4.83□□□□□ -1.64
ZNF558-202ENST00000593891 AHNAKQ09666 5890 aaKnown RBP4.83□□□□□ -1.64
ZNF558-202ENST00000593891 TRAV12-1A0A0B4J245 112 aa4.82□□□□□ -1.64
ZNF558-202ENST00000593891 J3QQQ9 107 aa4.82□□□□□ -1.64
ZNF558-202ENST00000593891 SCGB1D1O95968 90 aa4.82□□□□□ -1.64
ZNF558-202ENST00000593891 IGKV4-1P06312 121 aa4.82□□□□□ -1.64
ZNF558-202ENST00000593891 LINC00308Q8TCZ7 52 aa4.81□□□□□ -1.64
ZNF558-202ENST00000593891 IGHV6-1A0A0B4J1U7 121 aa4.8□□□□□ -1.64
ZNF558-202ENST00000593891 C9JQL5 133 aa4.8□□□□□ -1.64
ZNF558-202ENST00000593891 PMCHL1Q16048 86 aa4.8□□□□□ -1.64
ZNF558-202ENST00000593891 TEN1Q86WV5 123 aa4.8□□□□□ -1.64
ZNF558-202ENST00000593891 H3BUT2 72 aa4.79□□□□□ -1.64
ZNF558-202ENST00000593891 PRR15Q8IV56 129 aa4.78□□□□□ -1.64
ZNF558-202ENST00000593891 MT-ND4LP03901 98 aa4.77□□□□□ -1.65
ZNF558-202ENST00000593891 SNHG12Q9BXW3 62 aa4.77□□□□□ -1.65
ZNF558-202ENST00000593891 LINC00614P0C842 121 aa4.76□□□□□ -1.65
ZNF558-202ENST00000593891 PEA15Q15121 130 aa4.76□□□□□ -1.65
ZNF558-202ENST00000593891 Q6ZQY7 126 aa4.76□□□□□ -1.65
ZNF558-202ENST00000593891 DSCR8Q96T75 97 aa4.76□□□□□ -1.65
ZNF558-202ENST00000593891 CRIPTQ9P021 101 aa4.75□□□□□ -1.65
ZNF558-202ENST00000593891 LYRM7Q5U5X0 104 aa4.74□□□□□ -1.65
ZNF558-202ENST00000593891 LCA10Q71F78 164 aa4.74□□□□□ -1.65
ZNF558-202ENST00000593891 IFI27L1Q96BM0 104 aa4.73□□□□□ -1.65
ZNF558-202ENST00000593891 KRTAP4-6Q9BYQ5 205 aa4.73□□□□□ -1.65
ZNF558-202ENST00000593891 A6NDN8 102 aa4.72□□□□□ -1.65
ZNF558-202ENST00000593891 C8orf87E5RJ46 101 aa4.72□□□□□ -1.65
ZNF558-202ENST00000593891 HERVK_113P61574 105 aa4.72□□□□□ -1.65
ZNF558-202ENST00000593891 CSAG1Q6PB30 78 aa4.72□□□□□ -1.65
ZNF558-202ENST00000593891 TCTE3Q8IZS6 198 aa4.71□□□□□ -1.66
ZNF558-202ENST00000593891 URB1-AS1Q96HZ7 61 aa4.71□□□□□ -1.66
ZNF558-202ENST00000593891 hADV29S1A0JD25 119 aa4.69□□□□□ -1.66
ZNF558-202ENST00000593891 SERF1AO75920 110 aa4.69□□□□□ -1.66
ZNF558-202ENST00000593891 VAMP3Q15836 100 aa4.69□□□□□ -1.66
ZNF558-202ENST00000593891 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
ZNF558-202ENST00000593891 PPDPFLQ8WWR9 84 aa4.69□□□□□ -1.66
ZNF558-202ENST00000593891 IGKV3D-7A0A0C4DH55 119 aa4.68□□□□□ -1.66
ZNF558-202ENST00000593891 FABP9Q0Z7S8 132 aa4.68□□□□□ -1.66
ZNF558-202ENST00000593891 LINC00575Q6W349 94 aa4.68□□□□□ -1.66
ZNF558-202ENST00000593891 SEC11CQ9BY50 192 aa4.68□□□□□ -1.66
ZNF558-202ENST00000593891 DEFB116Q30KQ4 102 aa4.67□□□□□ -1.66
ZNF558-202ENST00000593891 LITAFQ99732 161 aa4.67□□□□□ -1.66
ZNF558-202ENST00000593891 TIMM17BO60830 172 aa4.65□□□□□ -1.67
ZNF558-202ENST00000593891 PLAC4Q8WY50 150 aa4.65□□□□□ -1.67
ZNF558-202ENST00000593891 PLNP26678 52 aa4.64□□□□□ -1.67
ZNF558-202ENST00000593891 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.64□□□□□ -1.67
ZNF558-202ENST00000593891 C18orf32Q8TCD1 76 aa4.64□□□□□ -1.67
ZNF558-202ENST00000593891 SMIM11BQ8TCY0 68 aa4.64□□□□□ -1.67
ZNF558-202ENST00000593891 RAB37Q96AX2 223 aa4.64□□□□□ -1.67
ZNF558-202ENST00000593891 A0A1B0GVX0 72 aa4.63□□□□□ -1.67
ZNF558-202ENST00000593891 H0Y8G0 127 aa4.63□□□□□ -1.67
ZNF558-202ENST00000593891 RGS21Q2M5E4 152 aa4.63□□□□□ -1.67
ZNF558-202ENST00000593891 MUC5ACP98088 5654 aa4.62□□□□□ -1.67
ZNF558-202ENST00000593891 KRTAP10-7P60409 375 aaPredicted RBP4.61□□□□□ -1.67
ZNF558-202ENST00000593891 COX19Q49B96 90 aa4.61□□□□□ -1.67
ZNF558-202ENST00000593891 KRTAP10-12P60413 245 aa4.6□□□□□ -1.67
ZNF558-202ENST00000593891 KRTAP5-4Q6L8H1 288 aa4.6□□□□□ -1.67
ZNF558-202ENST00000593891 LINC00472Q9H8W2 130 aa4.59□□□□□ -1.67
ZNF558-202ENST00000593891 S4R3F8 94 aa4.58□□□□□ -1.68
ZNF558-202ENST00000593891 DPM2O94777 84 aa4.57□□□□□ -1.68
ZNF558-202ENST00000593891 COPS9Q8WXC6 57 aa4.57□□□□□ -1.68
ZNF558-202ENST00000593891 CYSTM1Q9H1C7 97 aa4.57□□□□□ -1.68
ZNF558-202ENST00000593891 MUC5BQ9HC84 5762 aaPredicted RBP4.55□□□□□ -1.68
ZNF558-202ENST00000593891 KRTAP19-3Q7Z4W3 81 aa4.55□□□□□ -1.68
ZNF558-202ENST00000593891 HSPB8Q9UJY1 196 aa4.55□□□□□ -1.68
ZNF558-202ENST00000593891 E9PLD3 99 aa4.54□□□□□ -1.68
ZNF558-202ENST00000593891 PDE6GP18545 87 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms