RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 KRTAP10-2P60368 255 aa7.38□□□□□ -1.23
NPC1-214ENST00000593280 ATP5EP2Q5VTU8 51 aa7.38□□□□□ -1.23
NPC1-214ENST00000593280 SMIM29Q86T20 159 aa7.38□□□□□ -1.23
NPC1-214ENST00000593280 KRTAP13-1Q8IUC0 172 aa7.38□□□□□ -1.23
NPC1-214ENST00000593280 C1orf137Q5JT78 98 aa7.37□□□□□ -1.23
NPC1-214ENST00000593280 DNAH8Q96JB1 4490 aa7.36□□□□□ -1.23
NPC1-214ENST00000593280 LOC100996750A0A140TA64 210 aa7.35□□□□□ -1.23
NPC1-214ENST00000593280 Q6ZVQ6 151 aa7.35□□□□□ -1.23
NPC1-214ENST00000593280 KRTAP4-6Q9BYQ5 205 aa7.35□□□□□ -1.23
NPC1-214ENST00000593280 SPRR1BP22528 89 aa7.34□□□□□ -1.23
NPC1-214ENST00000593280 PSORS1C2Q9UIG4 136 aa7.34□□□□□ -1.23
NPC1-214ENST00000593280 FAM236AA0A1B0GUQ0 79 aa7.32□□□□□ -1.24
NPC1-214ENST00000593280 FAM236BA0A1B0GV22 79 aa7.32□□□□□ -1.24
NPC1-214ENST00000593280 A0A1B0GW54 56 aa7.32□□□□□ -1.24
NPC1-214ENST00000593280 A0A1W2PNM2 257 aa7.32□□□□□ -1.24
NPC1-214ENST00000593280 Q8NBF4 154 aa7.32□□□□□ -1.24
NPC1-214ENST00000593280 IGLV8-61A0A075B6I0 122 aa7.31□□□□□ -1.24
NPC1-214ENST00000593280 HAMPP81172 84 aa7.31□□□□□ -1.24
NPC1-214ENST00000593280 ANAPC13Q9BS18 74 aa7.31□□□□□ -1.24
NPC1-214ENST00000593280 RYR2Q92736 4967 aa7.31□□□□□ -1.24
NPC1-214ENST00000593280 LCE6AA0A183 80 aa7.3□□□□□ -1.24
NPC1-214ENST00000593280 FAM30AQ9NZY2 134 aa7.3□□□□□ -1.24
NPC1-214ENST00000593280 HIST1H4AP62805 103 aaKnown RBP7.3□□□□□ -1.24
NPC1-214ENST00000593280 CXCL6P80162 114 aa7.3□□□□□ -1.24
NPC1-214ENST00000593280 IGFL1Q6UW32 110 aa7.3□□□□□ -1.24
NPC1-214ENST00000593280 ZNF706Q9Y5V0 76 aaPredicted RBP7.3□□□□□ -1.24
NPC1-214ENST00000593280 KRTAP10-1P60331 282 aa7.29□□□□□ -1.24
NPC1-214ENST00000593280 NREPQ16612 68 aa7.29□□□□□ -1.24
NPC1-214ENST00000593280 Q6ZSA8 131 aa7.29□□□□□ -1.24
NPC1-214ENST00000593280 CIRBP-AS1Q8TBR5 109 aa7.29□□□□□ -1.24
NPC1-214ENST00000593280 SPRR4Q96PI1 79 aa7.29□□□□□ -1.24
NPC1-214ENST00000593280 ZNF861PO60384 105 aa7.28□□□□□ -1.24
NPC1-214ENST00000593280 A0A087WVE0 104 aa7.27□□□□□ -1.25
NPC1-214ENST00000593280 SCXQ7RTU7 201 aa7.27□□□□□ -1.25
NPC1-214ENST00000593280 CRYGAP11844 174 aa7.27□□□□□ -1.25
NPC1-214ENST00000593280 A0A0G2JQZ4 141 aa7.26□□□□□ -1.25
NPC1-214ENST00000593280 IGLV7-43P04211 117 aa7.26□□□□□ -1.25
NPC1-214ENST00000593280 LINC00483Q53H64 154 aa7.26□□□□□ -1.25
NPC1-214ENST00000593280 LINC00336Q6ZUF6 198 aa7.25□□□□□ -1.25
NPC1-214ENST00000593280 BPY2O14599 106 aa7.23□□□□□ -1.25
NPC1-214ENST00000593280 IGLV9-49A0A0B4J1Y8 123 aa7.22□□□□□ -1.25
NPC1-214ENST00000593280 ATOX1O00244 68 aa7.22□□□□□ -1.25
NPC1-214ENST00000593280 C9orf153Q5TBE3 101 aa7.22□□□□□ -1.25
NPC1-214ENST00000593280 BIRC6Q9NR09 4857 aa7.21□□□□□ -1.25
NPC1-214ENST00000593280 PKHD1P08F94 4074 aa7.21□□□□□ -1.26
NPC1-214ENST00000593280 SRRM2Q9UQ35 2752 aaKnown RBP7.2□□□□□ -1.26
NPC1-214ENST00000593280 A0A087WSZ3 146 aa7.19□□□□□ -1.26
NPC1-214ENST00000593280 RPL37AP61513 92 aaKnown RBP7.19□□□□□ -1.26
NPC1-214ENST00000593280 EPPK1P58107 5090 aaKnown RBP7.18□□□□□ -1.26
NPC1-214ENST00000593280 IGKV4-1P06312 121 aa7.17□□□□□ -1.26
NPC1-214ENST00000593280 Q8N9L7 120 aa7.17□□□□□ -1.26
NPC1-214ENST00000593280 MOBPQ13875 183 aa7.16□□□□□ -1.26
NPC1-214ENST00000593280 ANAPC11Q9NYG5 84 aa7.16□□□□□ -1.26
NPC1-214ENST00000593280 DYNC1H1Q14204 4646 aaKnown RBP7.16□□□□□ -1.26
NPC1-214ENST00000593280 LRP1BQ9NZR2 4599 aa7.15□□□□□ -1.26
NPC1-214ENST00000593280 A0A1B0GVY2 172 aa7.15□□□□□ -1.27
NPC1-214ENST00000593280 CCDC179H3BU77 68 aa7.15□□□□□ -1.27
NPC1-214ENST00000593280 DSCR10P59022 87 aa7.12□□□□□ -1.27
NPC1-214ENST00000593280 COX7CP15954 63 aa7.12□□□□□ -1.27
NPC1-214ENST00000593280 SERP2Q8N6R1 65 aa7.12□□□□□ -1.27
NPC1-214ENST00000593280 UQCRQO14949 82 aa7.11□□□□□ -1.27
NPC1-214ENST00000593280 HRCT1Q6UXD1 115 aa7.11□□□□□ -1.27
NPC1-214ENST00000593280 DEFB116Q30KQ4 102 aa7.1□□□□□ -1.27
NPC1-214ENST00000593280 K7EQZ3 153 aa7.09□□□□□ -1.27
NPC1-214ENST00000593280 SMIM20Q8N5G0 67 aa7.09□□□□□ -1.27
NPC1-214ENST00000593280 SS18L2Q9UHA2 77 aa7.09□□□□□ -1.27
NPC1-214ENST00000593280 LINC00472Q9H8W2 130 aa7.09□□□□□ -1.28
NPC1-214ENST00000593280 APOBP04114 4563 aaKnown RBP7.08□□□□□ -1.28
NPC1-214ENST00000593280 FAM229BQ4G0N7 80 aa7.07□□□□□ -1.28
NPC1-214ENST00000593280 TRAV7A0A075B6U4 112 aa7.06□□□□□ -1.28
NPC1-214ENST00000593280 SSBP3-AS1Q7Z2R9 100 aa7.06□□□□□ -1.28
NPC1-214ENST00000593280 J3KT08 172 aa7.05□□□□□ -1.28
NPC1-214ENST00000593280 VPS13BQ7Z7G8 4022 aa7.05□□□□□ -1.28
NPC1-214ENST00000593280 A0A087X002 238 aa7.04□□□□□ -1.28
NPC1-214ENST00000593280 A8MWP4 228 aa7.04□□□□□ -1.28
NPC1-214ENST00000593280 CD164Q04900 197 aa7.04□□□□□ -1.28
NPC1-214ENST00000593280 KRTAP17-1Q9BYP8 105 aa7.04□□□□□ -1.28
NPC1-214ENST00000593280 HCG22E2RYF7 251 aa7.03□□□□□ -1.28
NPC1-214ENST00000593280 Q96NJ1 140 aa7.03□□□□□ -1.28
NPC1-214ENST00000593280 KRTAP1-4P0C5Y4 121 aa7.02□□□□□ -1.29
NPC1-214ENST00000593280 KRTAP13-2Q52LG2 175 aa7.02□□□□□ -1.29
NPC1-214ENST00000593280 SPINK6Q6UWN8 80 aa7.01□□□□□ -1.29
NPC1-214ENST00000593280 PRR15Q8IV56 129 aa7.01□□□□□ -1.29
NPC1-214ENST00000593280 SMR3BP02814 79 aaPredicted RBP7.01□□□□□ -1.29
NPC1-214ENST00000593280 NDUFB1O75438 58 aa7□□□□□ -1.29
NPC1-214ENST00000593280 OCR1Q9BZK8 76 aa6.99□□□□□ -1.29
NPC1-214ENST00000593280 WFDC13Q8IUB5 93 aa6.98□□□□□ -1.29
NPC1-214ENST00000593280 PLA2G1BP04054 148 aaKnown RBP6.98□□□□□ -1.29
NPC1-214ENST00000593280 CDK2AP2O75956 126 aa6.97□□□□□ -1.29
NPC1-214ENST00000593280 C20orf197Q8N268 126 aa6.97□□□□□ -1.29
NPC1-214ENST00000593280 FAT1Q14517 4588 aa6.97□□□□□ -1.29
NPC1-214ENST00000593280 CASC2Q6XLA1 102 aa6.96□□□□□ -1.3
NPC1-214ENST00000593280 KRTAP29-1A8MX34 341 aaPredicted RBP6.95□□□□□ -1.3
NPC1-214ENST00000593280 ASB16-AS1Q495Z4 193 aa6.94□□□□□ -1.3
NPC1-214ENST00000593280 TYMSOSQ8TAI1 123 aa6.94□□□□□ -1.3
NPC1-214ENST00000593280 CYSTM1Q9H1C7 97 aa6.94□□□□□ -1.3
NPC1-214ENST00000593280 MMP24-AS1A0A0U1RRL7 71 aa6.94□□□□□ -1.3
NPC1-214ENST00000593280 A0A1B0GVX0 72 aa6.94□□□□□ -1.3
NPC1-214ENST00000593280 KRTAP10-4P60372 401 aaPredicted RBP6.93□□□□□ -1.3
NPC1-214ENST00000593280 IGHV6-1A0A0B4J1U7 121 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms