RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 IGLV1-50A0A075B6I6 118 aa6.39□□□□□ -1.39
LIG3-216ENST00000593099 ACYP2P14621 99 aa6.39□□□□□ -1.39
LIG3-216ENST00000593099 IGLV6-57P01721 117 aa6.38□□□□□ -1.39
LIG3-216ENST00000593099 C9orf129Q5T035 196 aaKnown RBP6.38□□□□□ -1.39
LIG3-216ENST00000593099 CDC42SE1Q9NRR8 79 aa6.38□□□□□ -1.39
LIG3-216ENST00000593099 UQCR11O14957 56 aa6.38□□□□□ -1.39
LIG3-216ENST00000593099 H7BZZ5 65 aa6.37□□□□□ -1.39
LIG3-216ENST00000593099 SPINK1P00995 79 aa6.37□□□□□ -1.39
LIG3-216ENST00000593099 PLA2G2DQ9UNK4 145 aa6.37□□□□□ -1.39
LIG3-216ENST00000593099 CRYBG3Q68DQ2 2970 aa6.37□□□□□ -1.39
LIG3-216ENST00000593099 KCNQ1DNQ9H478 68 aa6.37□□□□□ -1.39
LIG3-216ENST00000593099 SMIM29Q86T20 159 aa6.37□□□□□ -1.39
LIG3-216ENST00000593099 KRTAP16-1A8MUX0 517 aa6.36□□□□□ -1.39
LIG3-216ENST00000593099 ZNF861PO60384 105 aa6.36□□□□□ -1.39
LIG3-216ENST00000593099 Q8NBF4 154 aa6.36□□□□□ -1.39
LIG3-216ENST00000593099 LUZP6Q538Z0 58 aa6.35□□□□□ -1.39
LIG3-216ENST00000593099 A0A1W2PNN7 141 aa6.35□□□□□ -1.39
LIG3-216ENST00000593099 Q5XG85 94 aa6.34□□□□□ -1.39
LIG3-216ENST00000593099 SPACA4Q8TDM5 124 aa6.34□□□□□ -1.39
LIG3-216ENST00000593099 H3BPC8 53 aa6.34□□□□□ -1.39
LIG3-216ENST00000593099 LINC00528Q8N1L1 170 aa6.34□□□□□ -1.39
LIG3-216ENST00000593099 CRIPTQ9P021 101 aa6.34□□□□□ -1.39
LIG3-216ENST00000593099 ST20-AS1Q8NBB2 130 aa6.34□□□□□ -1.4
LIG3-216ENST00000593099 DCHS1Q96JQ0 3298 aa6.33□□□□□ -1.4
LIG3-216ENST00000593099 MIR22HGQ0VDD5 57 aa6.32□□□□□ -1.4
LIG3-216ENST00000593099 PSORS1C2Q9UIG4 136 aa6.32□□□□□ -1.4
LIG3-216ENST00000593099 IGHV6-1A0A0B4J1U7 121 aa6.32□□□□□ -1.4
LIG3-216ENST00000593099 KRTAP1-5Q9BYS1 174 aa6.32□□□□□ -1.4
LIG3-216ENST00000593099 IGLV7-43P04211 117 aa6.31□□□□□ -1.4
LIG3-216ENST00000593099 LINC01600Q96MT4 127 aa6.31□□□□□ -1.4
LIG3-216ENST00000593099 EIF4EBP3O60516 100 aaPredicted RBP6.31□□□□□ -1.4
LIG3-216ENST00000593099 FAM218AQ96MZ4 157 aa6.31□□□□□ -1.4
LIG3-216ENST00000593099 STAB2Q8WWQ8 2551 aa6.3□□□□□ -1.4
LIG3-216ENST00000593099 IGLV8-61A0A075B6I0 122 aa6.3□□□□□ -1.4
LIG3-216ENST00000593099 DEFB116Q30KQ4 102 aa6.3□□□□□ -1.4
LIG3-216ENST00000593099 COA5Q86WW8 74 aa6.3□□□□□ -1.4
LIG3-216ENST00000593099 FAM104AQ969W3 186 aa6.29□□□□□ -1.4
LIG3-216ENST00000593099 PRAC1Q96KF2 57 aa6.28□□□□□ -1.4
LIG3-216ENST00000593099 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.28□□□□□ -1.4
LIG3-216ENST00000593099 FBN2P35556 2912 aa6.28□□□□□ -1.4
LIG3-216ENST00000593099 IGLV5-37A0A075B6J1 123 aa6.28□□□□□ -1.4
LIG3-216ENST00000593099 PRR26Q8N8Z3 221 aa6.27□□□□□ -1.41
LIG3-216ENST00000593099 NF1P21359 2839 aa6.27□□□□□ -1.41
LIG3-216ENST00000593099 Q1T7F1 81 aa6.27□□□□□ -1.41
LIG3-216ENST00000593099 A0A1B0GW54 56 aa6.26□□□□□ -1.41
LIG3-216ENST00000593099 DCHS2Q6V1P9 2916 aa6.25□□□□□ -1.41
LIG3-216ENST00000593099 Q6ZR54 194 aa6.25□□□□□ -1.41
LIG3-216ENST00000593099 LINC00304Q8N9R0 145 aa6.25□□□□□ -1.41
LIG3-216ENST00000593099 LINC00313P59037 77 aa6.23□□□□□ -1.41
LIG3-216ENST00000593099 MXRA5Q9NR99 2828 aa6.23□□□□□ -1.41
LIG3-216ENST00000593099 PDZD2O15018 2839 aa6.23□□□□□ -1.41
LIG3-216ENST00000593099 SEC61BP60468 96 aaKnown RBP6.23□□□□□ -1.41
LIG3-216ENST00000593099 PLAC8Q9NZF1 115 aa6.23□□□□□ -1.41
LIG3-216ENST00000593099 TP53AIP1Q9HCN2 124 aa6.22□□□□□ -1.41
LIG3-216ENST00000593099 WDFY3Q8IZQ1 3526 aa6.22□□□□□ -1.41
LIG3-216ENST00000593099 KRTAP26-1Q6PEX3 210 aa6.21□□□□□ -1.41
LIG3-216ENST00000593099 SPRR4Q96PI1 79 aa6.21□□□□□ -1.41
LIG3-216ENST00000593099 RELNP78509 3460 aa6.21□□□□□ -1.42
LIG3-216ENST00000593099 ANAPC11Q9NYG5 84 aa6.2□□□□□ -1.42
LIG3-216ENST00000593099 LOC110117498A0A087WWA1 95 aa6.19□□□□□ -1.42
LIG3-216ENST00000593099 TRBV7-4A0A0J9YYF1 115 aa6.19□□□□□ -1.42
LIG3-216ENST00000593099 FP248Q71RG6 208 aaPredicted RBP6.19□□□□□ -1.42
LIG3-216ENST00000593099 KRTAP10-2P60368 255 aa6.19□□□□□ -1.42
LIG3-216ENST00000593099 DMDP11532 3685 aa6.19□□□□□ -1.42
LIG3-216ENST00000593099 Q6ZQT0 140 aa6.18□□□□□ -1.42
LIG3-216ENST00000593099 Q8N377 158 aa6.18□□□□□ -1.42
LIG3-216ENST00000593099 DMAC1Q96GE9 116 aa6.18□□□□□ -1.42
LIG3-216ENST00000593099 KRTAP10-1P60331 282 aa6.17□□□□□ -1.42
LIG3-216ENST00000593099 LAMA5O15230 3695 aa6.16□□□□□ -1.42
LIG3-216ENST00000593099 CSAG1Q6PB30 78 aa6.16□□□□□ -1.42
LIG3-216ENST00000593099 IGFL1Q6UW32 110 aa6.16□□□□□ -1.42
LIG3-216ENST00000593099 FLG2Q5D862 2391 aaPredicted RBP6.15□□□□□ -1.43
LIG3-216ENST00000593099 OTOGQ6ZRI0 2925 aa6.14□□□□□ -1.43
LIG3-216ENST00000593099 Q75L30 129 aa6.14□□□□□ -1.43
LIG3-216ENST00000593099 Q5VSD8 79 aa6.11□□□□□ -1.43
LIG3-216ENST00000593099 FAM229BQ4G0N7 80 aa6.11□□□□□ -1.43
LIG3-216ENST00000593099 Q96NJ1 140 aa6.11□□□□□ -1.43
LIG3-216ENST00000593099 Q6ZRN7 208 aaPredicted RBP6.1□□□□□ -1.43
LIG3-216ENST00000593099 IGKV2D-30A0A075B6S6 120 aa6.1□□□□□ -1.43
LIG3-216ENST00000593099 IGKV2-30P06310 120 aa6.1□□□□□ -1.43
LIG3-216ENST00000593099 CAMK2N1Q7Z7J9 78 aa6.1□□□□□ -1.43
LIG3-216ENST00000593099 A0A0G2JQZ4 141 aa6.08□□□□□ -1.44
LIG3-216ENST00000593099 A8MWP4 228 aa6.07□□□□□ -1.44
LIG3-216ENST00000593099 SPRR1AP35321 89 aa6.07□□□□□ -1.44
LIG3-216ENST00000593099 SPANXA2-OT1Q8N9U9 137 aa6.07□□□□□ -1.44
LIG3-216ENST00000593099 IGLV5-48A0A075B6I7 105 aa6.06□□□□□ -1.44
LIG3-216ENST00000593099 Q8NDZ9 215 aa6.06□□□□□ -1.44
LIG3-216ENST00000593099 ASPMQ8IZT6 3477 aa6.06□□□□□ -1.44
LIG3-216ENST00000593099 OXTP01178 125 aa6.04□□□□□ -1.44
LIG3-216ENST00000593099 PANO1I0J062 215 aa6.03□□□□□ -1.44
LIG3-216ENST00000593099 C9orf92A6NGG3 77 aa6.03□□□□□ -1.44
LIG3-216ENST00000593099 Q5VV11 94 aa6.03□□□□□ -1.44
LIG3-216ENST00000593099 A0A1W2PNM2 257 aa6.02□□□□□ -1.45
LIG3-216ENST00000593099 OBSCN-AS1Q96MR7 158 aa6.02□□□□□ -1.45
LIG3-216ENST00000593099 DSCR10P59022 87 aa6.02□□□□□ -1.45
LIG3-216ENST00000593099 Q8N9P0 234 aaPredicted RBP6.02□□□□□ -1.45
LIG3-216ENST00000593099 MRPL34Q9BQ48 92 aaKnown RBP6.02□□□□□ -1.45
LIG3-216ENST00000593099 A0A1B0GVX0 72 aa6.01□□□□□ -1.45
LIG3-216ENST00000593099 C8orf17Q9NRJ1 99 aa6.01□□□□□ -1.45
LIG3-216ENST00000593099 IGLV7-46A0A075B6I9 117 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms