RNA–Protein interactions for RNA: ENST00000592244.1

LIG3-214, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-214ENST00000592244 SMIM29Q86T20 159 aa6.11□□□□□ -1.43
LIG3-214ENST00000592244 TCL1BO95988 128 aa6.1□□□□□ -1.43
LIG3-214ENST00000592244 LINC01547P58512 204 aaPredicted RBP6.1□□□□□ -1.43
LIG3-214ENST00000592244 XP32Q5T750 250 aa6.09□□□□□ -1.43
LIG3-214ENST00000592244 Q6JHZ5 121 aa6.09□□□□□ -1.43
LIG3-214ENST00000592244 Q6ZQY7 126 aa6.09□□□□□ -1.43
LIG3-214ENST00000592244 PPDPFLQ8WWR9 84 aa6.09□□□□□ -1.43
LIG3-214ENST00000592244 RAB37Q96AX2 223 aa6.09□□□□□ -1.43
LIG3-214ENST00000592244 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.08□□□□□ -1.44
LIG3-214ENST00000592244 C12orf57Q99622 126 aa6.08□□□□□ -1.44
LIG3-214ENST00000592244 VAMP8Q9BV40 100 aa6.08□□□□□ -1.44
LIG3-214ENST00000592244 SPATA45Q537H7 98 aa6.07□□□□□ -1.44
LIG3-214ENST00000592244 SNHG12Q9BXW3 62 aa6.07□□□□□ -1.44
LIG3-214ENST00000592244 HIGD1BQ9P298 99 aa6.07□□□□□ -1.44
LIG3-214ENST00000592244 PAM16Q9Y3D7 125 aa6.07□□□□□ -1.44
LIG3-214ENST00000592244 C14orf144Q96I85 54 aa6.06□□□□□ -1.44
LIG3-214ENST00000592244 H0YGX0 51 aa6.05□□□□□ -1.44
LIG3-214ENST00000592244 OCIAD2Q56VL3 154 aa6.05□□□□□ -1.44
LIG3-214ENST00000592244 CLEC2BQ92478 149 aa6.04□□□□□ -1.44
LIG3-214ENST00000592244 MUC17Q685J3 4493 aa6.03□□□□□ -1.44
LIG3-214ENST00000592244 IGLV8-61A0A075B6I0 122 aa6.03□□□□□ -1.44
LIG3-214ENST00000592244 A0A0B4J2C4 111 aa6.03□□□□□ -1.44
LIG3-214ENST00000592244 C9orf92A6NGG3 77 aa6.03□□□□□ -1.44
LIG3-214ENST00000592244 CFC1BP0CG36 223 aa6.03□□□□□ -1.44
LIG3-214ENST00000592244 CFC1P0CG37 223 aa6.03□□□□□ -1.44
LIG3-214ENST00000592244 C1orf195Q5TG92 126 aa6.03□□□□□ -1.44
LIG3-214ENST00000592244 A0A0G2JQZ4 141 aa6.01□□□□□ -1.45
LIG3-214ENST00000592244 TRBV7-7A0A0K0K1E9 115 aa6□□□□□ -1.45
LIG3-214ENST00000592244 LCE2AQ5TA79 106 aaPredicted RBP6□□□□□ -1.45
LIG3-214ENST00000592244 CEND1Q8N111 149 aa6□□□□□ -1.45
LIG3-214ENST00000592244 PRO1854Q9UHT4 67 aa6□□□□□ -1.45
LIG3-214ENST00000592244 A0A1B0GX51 115 aa5.99□□□□□ -1.45
LIG3-214ENST00000592244 IGFL1Q6UW32 110 aa5.99□□□□□ -1.45
LIG3-214ENST00000592244 C2orf91Q6ZV80 131 aa5.98□□□□□ -1.45
LIG3-214ENST00000592244 SS18L2Q9UHA2 77 aa5.98□□□□□ -1.45
LIG3-214ENST00000592244 PCOTHQ58A44 107 aa5.97□□□□□ -1.45
LIG3-214ENST00000592244 FAT4Q6V0I7 4981 aa5.97□□□□□ -1.45
LIG3-214ENST00000592244 H3BQ85 93 aa5.96□□□□□ -1.46
LIG3-214ENST00000592244 LST1O00453 97 aa5.96□□□□□ -1.46
LIG3-214ENST00000592244 H3BUT2 72 aa5.95□□□□□ -1.46
LIG3-214ENST00000592244 DNAL4O96015 105 aa5.95□□□□□ -1.46
LIG3-214ENST00000592244 COX6CP09669 75 aa5.95□□□□□ -1.46
LIG3-214ENST00000592244 SMIM6P0DI80 62 aa5.95□□□□□ -1.46
LIG3-214ENST00000592244 NDUFV3P56181 108 aaKnown RBP5.95□□□□□ -1.46
LIG3-214ENST00000592244 HSD52Q0P140 79 aa5.95□□□□□ -1.46
LIG3-214ENST00000592244 LOC105371267A0A1B0GV96 52 aa5.94□□□□□ -1.46
LIG3-214ENST00000592244 FABP2P12104 132 aa5.94□□□□□ -1.46
LIG3-214ENST00000592244 TEN1Q86WV5 123 aa5.94□□□□□ -1.46
LIG3-214ENST00000592244 KRTAP4-1Q9BYQ7 146 aa5.94□□□□□ -1.46
LIG3-214ENST00000592244 LCE2BO14633 110 aa5.93□□□□□ -1.46
LIG3-214ENST00000592244 PSMB2P49721 201 aa5.93□□□□□ -1.46
LIG3-214ENST00000592244 FXYD2P54710 66 aa5.93□□□□□ -1.46
LIG3-214ENST00000592244 RPL37P61927 97 aaKnown RBP5.93□□□□□ -1.46
LIG3-214ENST00000592244 Q6Q795 121 aa5.93□□□□□ -1.46
LIG3-214ENST00000592244 H3BMG7 143 aa5.92□□□□□ -1.46
LIG3-214ENST00000592244 PYY3Q5JQD4 70 aa5.92□□□□□ -1.46
LIG3-214ENST00000592244 FAM218AQ96MZ4 157 aa5.92□□□□□ -1.46
LIG3-214ENST00000592244 TRIAP1O43715 76 aa5.91□□□□□ -1.46
LIG3-214ENST00000592244 UQCR10Q9UDW1 63 aa5.91□□□□□ -1.46
LIG3-214ENST00000592244 ORMDL1Q9P0S3 153 aa5.9□□□□□ -1.46
LIG3-214ENST00000592244 ATP11AUNQ6ZP68 121 aa5.89□□□□□ -1.47
LIG3-214ENST00000592244 TMEM256-PLSCR3K7ERE1 68 aa5.88□□□□□ -1.47
LIG3-214ENST00000592244 OBSCN-AS1Q96MR7 158 aa5.88□□□□□ -1.47
LIG3-214ENST00000592244 A0A087WSZ3 146 aa5.87□□□□□ -1.47
LIG3-214ENST00000592244 ANKRD29Q8N6D5 301 aa5.87□□□□□ -1.47
LIG3-214ENST00000592244 KRTAP9-2Q9BYQ4 174 aa5.87□□□□□ -1.47
LIG3-214ENST00000592244 Q75L30 129 aa5.86□□□□□ -1.47
LIG3-214ENST00000592244 K7ERJ3 54 aa5.85□□□□□ -1.47
LIG3-214ENST00000592244 SCGB1C2P0DMR2 95 aa5.85□□□□□ -1.47
LIG3-214ENST00000592244 COX6B2Q6YFQ2 88 aa5.85□□□□□ -1.47
LIG3-214ENST00000592244 TRBV7-4A0A0J9YYF1 115 aa5.84□□□□□ -1.47
LIG3-214ENST00000592244 TSTD3H0UI37 97 aa5.84□□□□□ -1.47
LIG3-214ENST00000592244 Q96NJ1 140 aa5.84□□□□□ -1.47
LIG3-214ENST00000592244 TRACP01848 142 aa5.82□□□□□ -1.48
LIG3-214ENST00000592244 UBE2V1Q13404 147 aa5.82□□□□□ -1.48
LIG3-214ENST00000592244 SIGMAR1Q99720 223 aa5.82□□□□□ -1.48
LIG3-214ENST00000592244 LCE2CQ5TA81 110 aa5.81□□□□□ -1.48
LIG3-214ENST00000592244 A0A1W2PNM2 257 aa5.8□□□□□ -1.48
LIG3-214ENST00000592244 M0R143 59 aa5.8□□□□□ -1.48
LIG3-214ENST00000592244 A0A1B0GV72 72 aa5.79□□□□□ -1.48
LIG3-214ENST00000592244 CCKP06307 115 aa5.79□□□□□ -1.48
LIG3-214ENST00000592244 DSCR8Q96T75 97 aa5.79□□□□□ -1.48
LIG3-214ENST00000592244 M0R2T5 61 aa5.78□□□□□ -1.48
LIG3-214ENST00000592244 IGKV4-1P06312 121 aa5.78□□□□□ -1.48
LIG3-214ENST00000592244 RBM3P98179 157 aaKnown RBP5.78□□□□□ -1.48
LIG3-214ENST00000592244 KRTAP19-2Q3LHN2 52 aa5.78□□□□□ -1.48
LIG3-214ENST00000592244 C20orf166-AS1Q96NR2 134 aa5.78□□□□□ -1.48
LIG3-214ENST00000592244 LINC00313P59037 77 aa5.77□□□□□ -1.49
LIG3-214ENST00000592244 MT1HP80294 61 aa5.77□□□□□ -1.49
LIG3-214ENST00000592244 TRBV20-1A0A075B6N2 111 aa5.76□□□□□ -1.49
LIG3-214ENST00000592244 A8MUU9 505 aa5.76□□□□□ -1.49
LIG3-214ENST00000592244 VPS25Q9BRG1 176 aa5.76□□□□□ -1.49
LIG3-214ENST00000592244 DSCR10P59022 87 aa5.75□□□□□ -1.49
LIG3-214ENST00000592244 C9JAW5 83 aa5.74□□□□□ -1.49
LIG3-214ENST00000592244 BAALC-AS2P0C853 105 aa5.74□□□□□ -1.49
LIG3-214ENST00000592244 ATXN8Q156A1 80 aa5.74□□□□□ -1.49
LIG3-214ENST00000592244 LYRM7Q5U5X0 104 aa5.73□□□□□ -1.49
LIG3-214ENST00000592244 J3KT08 172 aa5.72□□□□□ -1.49
LIG3-214ENST00000592244 LINC00472Q9H8W2 130 aa5.72□□□□□ -1.49
LIG3-214ENST00000592244 JMJD7-PLA2G4BH0Y9G9 81 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms