RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 MRPL34Q9BQ48 92 aaKnown RBP10.83□□□□□ -0.68
SMARCA4-215ENST00000590574 C8orf17Q9NRJ1 99 aa10.83□□□□□ -0.68
SMARCA4-215ENST00000590574 UTP20O75691 2785 aaKnown RBP10.82□□□□□ -0.68
SMARCA4-215ENST00000590574 SPRR1AP35321 89 aa10.81□□□□□ -0.68
SMARCA4-215ENST00000590574 IGKV2D-30A0A075B6S6 120 aa10.81□□□□□ -0.68
SMARCA4-215ENST00000590574 IGKV2-30P06310 120 aa10.81□□□□□ -0.68
SMARCA4-215ENST00000590574 ACYP2P14621 99 aa10.8□□□□□ -0.68
SMARCA4-215ENST00000590574 SPACA4Q8TDM5 124 aa10.79□□□□□ -0.68
SMARCA4-215ENST00000590574 ANAPC11Q9NYG5 84 aa10.79□□□□□ -0.68
SMARCA4-215ENST00000590574 SPINK1P00995 79 aa10.79□□□□□ -0.68
SMARCA4-215ENST00000590574 OXTP01178 125 aa10.79□□□□□ -0.68
SMARCA4-215ENST00000590574 LINC00313P59037 77 aa10.77□□□□□ -0.68
SMARCA4-215ENST00000590574 A0A1B0GVX0 72 aa10.77□□□□□ -0.69
SMARCA4-215ENST00000590574 A0A087WTM6 91 aa10.76□□□□□ -0.69
SMARCA4-215ENST00000590574 LOC101927531A0A1B0GV80 90 aa10.75□□□□□ -0.69
SMARCA4-215ENST00000590574 ZNF861PO60384 105 aa10.75□□□□□ -0.69
SMARCA4-215ENST00000590574 MAST4O15021 2626 aa10.74□□□□□ -0.69
SMARCA4-215ENST00000590574 CSMD1Q96PZ7 3565 aa10.74□□□□□ -0.69
SMARCA4-215ENST00000590574 ZANQ9Y493 2812 aa10.73□□□□□ -0.69
SMARCA4-215ENST00000590574 FAM229BQ4G0N7 80 aa10.73□□□□□ -0.69
SMARCA4-215ENST00000590574 UNC79Q9P2D8 2635 aa10.73□□□□□ -0.69
SMARCA4-215ENST00000590574 C7orf65Q6ZTY9 151 aa10.72□□□□□ -0.69
SMARCA4-215ENST00000590574 A0A1B0GU69 56 aa10.71□□□□□ -0.69
SMARCA4-215ENST00000590574 PSORS1C2Q9UIG4 136 aa10.71□□□□□ -0.69
SMARCA4-215ENST00000590574 FP248Q71RG6 208 aaPredicted RBP10.71□□□□□ -0.69
SMARCA4-215ENST00000590574 MGAM2Q2M2H8 2515 aa10.71□□□□□ -0.7
SMARCA4-215ENST00000590574 SPANXA2-OT1Q8N9U9 137 aa10.7□□□□□ -0.7
SMARCA4-215ENST00000590574 C8orf87E5RJ46 101 aa10.68□□□□□ -0.7
SMARCA4-215ENST00000590574 CYP4F30PQ9H0H9 118 aa10.67□□□□□ -0.7
SMARCA4-215ENST00000590574 DCHS2Q6V1P9 2916 aa10.65□□□□□ -0.71
SMARCA4-215ENST00000590574 K7ERS5 55 aa10.64□□□□□ -0.71
SMARCA4-215ENST00000590574 Q1T7F1 81 aa10.64□□□□□ -0.71
SMARCA4-215ENST00000590574 FAM229AH3BQW9 127 aa10.63□□□□□ -0.71
SMARCA4-215ENST00000590574 TNP2Q05952 138 aa10.63□□□□□ -0.71
SMARCA4-215ENST00000590574 KRTAP1-5Q9BYS1 174 aa10.63□□□□□ -0.71
SMARCA4-215ENST00000590574 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.63□□□□□ -0.71
SMARCA4-215ENST00000590574 KRTAP4-16G5E9R7 235 aaPredicted RBP10.62□□□□□ -0.71
SMARCA4-215ENST00000590574 ASH1LQ9NR48 2969 aaKnown RBP10.62□□□□□ -0.71
SMARCA4-215ENST00000590574 TYMSOSQ8TAI1 123 aa10.61□□□□□ -0.71
SMARCA4-215ENST00000590574 IGLV7-43P04211 117 aa10.61□□□□□ -0.71
SMARCA4-215ENST00000590574 TEP1Q99973 2627 aaKnown RBP10.6□□□□□ -0.71
SMARCA4-215ENST00000590574 IGLV8-61A0A075B6I0 122 aa10.6□□□□□ -0.71
SMARCA4-215ENST00000590574 UBR5O95071 2799 aaPredicted RBP10.59□□□□□ -0.71
SMARCA4-215ENST00000590574 SSBP3-AS1Q7Z2R9 100 aa10.59□□□□□ -0.71
SMARCA4-215ENST00000590574 Q96NJ1 140 aa10.58□□□□□ -0.72
SMARCA4-215ENST00000590574 APCP25054 2843 aa10.57□□□□□ -0.72
SMARCA4-215ENST00000590574 CRYBG3Q68DQ2 2970 aa10.56□□□□□ -0.72
SMARCA4-215ENST00000590574 MMP24-AS1A0A0U1RRL7 71 aa10.56□□□□□ -0.72
SMARCA4-215ENST00000590574 LINC00472Q9H8W2 130 aa10.54□□□□□ -0.72
SMARCA4-215ENST00000590574 PLA2G1BP04054 148 aaKnown RBP10.53□□□□□ -0.72
SMARCA4-215ENST00000590574 SPRR1BP22528 89 aa10.53□□□□□ -0.72
SMARCA4-215ENST00000590574 IGLV7-46A0A075B6I9 117 aa10.5□□□□□ -0.73
SMARCA4-215ENST00000590574 SVEP1Q4LDE5 3571 aa10.5□□□□□ -0.73
SMARCA4-215ENST00000590574 FBN2P35556 2912 aa10.5□□□□□ -0.73
SMARCA4-215ENST00000590574 NOTCH1P46531 2555 aa10.49□□□□□ -0.73
SMARCA4-215ENST00000590574 ATP11AUNQ6ZP68 121 aa10.48□□□□□ -0.73
SMARCA4-215ENST00000590574 WWC2-AS2Q96NR7 200 aa10.46□□□□□ -0.74
SMARCA4-215ENST00000590574 KRTAP7-1Q8IUC3 87 aa10.45□□□□□ -0.74
SMARCA4-215ENST00000590574 CELSR2Q9HCU4 2923 aa10.44□□□□□ -0.74
SMARCA4-215ENST00000590574 ITPR2Q14571 2701 aa10.44□□□□□ -0.74
SMARCA4-215ENST00000590574 Q8N9P0 234 aaPredicted RBP10.42□□□□□ -0.74
SMARCA4-215ENST00000590574 MXRA5Q9NR99 2828 aa10.41□□□□□ -0.74
SMARCA4-215ENST00000590574 PRR26Q8N8Z3 221 aa10.41□□□□□ -0.74
SMARCA4-215ENST00000590574 CD164Q04900 197 aa10.41□□□□□ -0.74
SMARCA4-215ENST00000590574 NF1P21359 2839 aa10.4□□□□□ -0.74
SMARCA4-215ENST00000590574 CDC42SE1Q9NRR8 79 aa10.39□□□□□ -0.75
SMARCA4-215ENST00000590574 PLAC8Q9NZF1 115 aa10.39□□□□□ -0.75
SMARCA4-215ENST00000590574 BSNQ9UPA5 3926 aa10.39□□□□□ -0.75
SMARCA4-215ENST00000590574 SPENQ96T58 3664 aaKnown RBP10.39□□□□□ -0.75
SMARCA4-215ENST00000590574 COL6A5A8TX70 2615 aa10.39□□□□□ -0.75
SMARCA4-215ENST00000590574 STAB1Q9NY15 2570 aa10.38□□□□□ -0.75
SMARCA4-215ENST00000590574 UQCR11O14957 56 aa10.38□□□□□ -0.75
SMARCA4-215ENST00000590574 PANO1I0J062 215 aa10.38□□□□□ -0.75
SMARCA4-215ENST00000590574 KTN1-AS1Q86SY8 53 aa10.37□□□□□ -0.75
SMARCA4-215ENST00000590574 ZCCHC13Q8WW36 166 aaKnown RBP10.36□□□□□ -0.75
SMARCA4-215ENST00000590574 KRTAP29-1A8MX34 341 aaPredicted RBP10.36□□□□□ -0.75
SMARCA4-215ENST00000590574 LINC00304Q8N9R0 145 aa10.35□□□□□ -0.75
SMARCA4-215ENST00000590574 CELSR1Q9NYQ6 3014 aa10.35□□□□□ -0.75
SMARCA4-215ENST00000590574 Q5VV11 94 aa10.35□□□□□ -0.75
SMARCA4-215ENST00000590574 Q75L30 129 aa10.35□□□□□ -0.75
SMARCA4-215ENST00000590574 KRTAP11-1Q8IUC1 163 aa10.34□□□□□ -0.75
SMARCA4-215ENST00000590574 MIR22HGQ0VDD5 57 aa10.34□□□□□ -0.75
SMARCA4-215ENST00000590574 C9orf92A6NGG3 77 aa10.31□□□□□ -0.76
SMARCA4-215ENST00000590574 HRES1P13985 223 aa10.31□□□□□ -0.76
SMARCA4-215ENST00000590574 LINC01558Q9Y6Z2 57 aa10.28□□□□□ -0.76
SMARCA4-215ENST00000590574 SMR3BP02814 79 aaPredicted RBP10.28□□□□□ -0.76
SMARCA4-215ENST00000590574 LINC00483Q53H64 154 aa10.27□□□□□ -0.76
SMARCA4-215ENST00000590574 HIVEP1P15822 2718 aa10.27□□□□□ -0.76
SMARCA4-215ENST00000590574 LCE6AA0A183 80 aa10.27□□□□□ -0.77
SMARCA4-215ENST00000590574 BAHCC1Q9P281 2608 aa10.26□□□□□ -0.77
SMARCA4-215ENST00000590574 Q8N1X5 172 aa10.26□□□□□ -0.77
SMARCA4-215ENST00000590574 NSD1Q96L73 2696 aaPredicted RBP10.24□□□□□ -0.77
SMARCA4-215ENST00000590574 NIPBLQ6KC79 2804 aaeCLIP10.22□□□□□ -0.774e-6■□□□□ 9.9
SMARCA4-215ENST00000590574 Q5W150 140 aa10.2□□□□□ -0.78
SMARCA4-215ENST00000590574 NBEAL1Q6ZS30 2694 aa10.19□□□□□ -0.78
SMARCA4-215ENST00000590574 Q6ZR54 194 aa10.18□□□□□ -0.78
SMARCA4-215ENST00000590574 SPINK7P58062 85 aa10.15□□□□□ -0.78
SMARCA4-215ENST00000590574 LCA10Q71F78 164 aa10.13□□□□□ -0.79
SMARCA4-215ENST00000590574 KMT2BQ9UMN6 2715 aaPredicted RBP10.13□□□□□ -0.79
SMARCA4-215ENST00000590574 A0A087X002 238 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms