RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 SMIM11BQ8TCY0 68 aa3.53□□□□□ -1.84
VPS25-204ENST00000589577 DHRS4-AS1Q9P1J3 65 aa3.53□□□□□ -1.84
VPS25-204ENST00000589577 ZNF706Q9Y5V0 76 aaPredicted RBP3.53□□□□□ -1.84
VPS25-204ENST00000589577 K7ERJ3 54 aa3.52□□□□□ -1.85
VPS25-204ENST00000589577 Q6ZRX8 168 aa3.52□□□□□ -1.85
VPS25-204ENST00000589577 HIGD2AQ9BW72 106 aa3.52□□□□□ -1.85
VPS25-204ENST00000589577 IGLV7-46A0A075B6I9 117 aa3.51□□□□□ -1.85
VPS25-204ENST00000589577 A0A087X002 238 aa3.51□□□□□ -1.85
VPS25-204ENST00000589577 ZNF861PO60384 105 aa3.51□□□□□ -1.85
VPS25-204ENST00000589577 ELOF1P60002 83 aaKnown RBP3.51□□□□□ -1.85
VPS25-204ENST00000589577 PRLHP81277 87 aa3.51□□□□□ -1.85
VPS25-204ENST00000589577 KRTAP7-1Q8IUC3 87 aa3.51□□□□□ -1.85
VPS25-204ENST00000589577 A0A1B0GX51 115 aa3.5□□□□□ -1.85
VPS25-204ENST00000589577 FABP2P12104 132 aa3.5□□□□□ -1.85
VPS25-204ENST00000589577 SPRR1AP35321 89 aa3.5□□□□□ -1.85
VPS25-204ENST00000589577 SNHG12Q9BXW3 62 aa3.5□□□□□ -1.85
VPS25-204ENST00000589577 TRBV20-1A0A075B6N2 111 aa3.49□□□□□ -1.85
VPS25-204ENST00000589577 hADV29S1A0JD25 119 aa3.49□□□□□ -1.85
VPS25-204ENST00000589577 C9orf118A6NHY6 69 aa3.49□□□□□ -1.85
VPS25-204ENST00000589577 B5MCH6 92 aa3.49□□□□□ -1.85
VPS25-204ENST00000589577 H3BQ85 93 aa3.49□□□□□ -1.85
VPS25-204ENST00000589577 H3BUT2 72 aa3.49□□□□□ -1.85
VPS25-204ENST00000589577 TRIAP1O43715 76 aa3.49□□□□□ -1.85
VPS25-204ENST00000589577 ATXN8Q156A1 80 aa3.49□□□□□ -1.85
VPS25-204ENST00000589577 OCIAD2Q56VL3 154 aa3.49□□□□□ -1.85
VPS25-204ENST00000589577 F8WEM9 126 aa3.48□□□□□ -1.85
VPS25-204ENST00000589577 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.48□□□□□ -1.85
VPS25-204ENST00000589577 KRTAP4-16G5E9R7 235 aaPredicted RBP3.47□□□□□ -1.85
VPS25-204ENST00000589577 TRACP01848 142 aa3.47□□□□□ -1.85
VPS25-204ENST00000589577 LINC00575Q6W349 94 aa3.47□□□□□ -1.85
VPS25-204ENST00000589577 GTF2H5Q6ZYL4 71 aa3.47□□□□□ -1.85
VPS25-204ENST00000589577 SMCR5Q8TEV8 140 aa3.47□□□□□ -1.85
VPS25-204ENST00000589577 FLGP20930 4061 aaPredicted RBP3.47□□□□□ -1.85
VPS25-204ENST00000589577 A0A1W2PPM0 123 aa3.46□□□□□ -1.86
VPS25-204ENST00000589577 TAX1BP3O14907 124 aa3.46□□□□□ -1.86
VPS25-204ENST00000589577 KRTAP13-3Q3SY46 172 aa3.46□□□□□ -1.86
VPS25-204ENST00000589577 KRTAP13-2Q52LG2 175 aa3.46□□□□□ -1.86
VPS25-204ENST00000589577 GAGE2AQ6NT46 116 aa3.46□□□□□ -1.86
VPS25-204ENST00000589577 Q6ZQY7 126 aa3.46□□□□□ -1.86
VPS25-204ENST00000589577 TYMSOSQ8TAI1 123 aa3.46□□□□□ -1.86
VPS25-204ENST00000589577 PPDPFLQ8WWR9 84 aa3.46□□□□□ -1.86
VPS25-204ENST00000589577 CLEC2BQ92478 149 aa3.46□□□□□ -1.86
VPS25-204ENST00000589577 NAA38Q9BRA0 125 aaKnown RBP3.46□□□□□ -1.86
VPS25-204ENST00000589577 ORMDL1Q9P0S3 153 aa3.46□□□□□ -1.86
VPS25-204ENST00000589577 LAMTOR3Q9UHA4 124 aa3.46□□□□□ -1.86
VPS25-204ENST00000589577 TEX49A0A1B0GTD5 131 aa3.45□□□□□ -1.86
VPS25-204ENST00000589577 LST1O00453 97 aa3.45□□□□□ -1.86
VPS25-204ENST00000589577 KRTAP13-1Q8IUC0 172 aa3.45□□□□□ -1.86
VPS25-204ENST00000589577 DEFB105AQ8NG35 78 aa3.45□□□□□ -1.86
VPS25-204ENST00000589577 Q9BRP9 147 aa3.45□□□□□ -1.86
VPS25-204ENST00000589577 KRTAP4-8Q9BYQ9 185 aa3.45□□□□□ -1.86
VPS25-204ENST00000589577 SPCS1Q9Y6A9 102 aa3.45□□□□□ -1.86
VPS25-204ENST00000589577 TMEM256-PLSCR3K7ERE1 68 aa3.44□□□□□ -1.86
VPS25-204ENST00000589577 SPRR4Q96PI1 79 aa3.44□□□□□ -1.86
VPS25-204ENST00000589577 TCL1BO95988 128 aa3.43□□□□□ -1.86
VPS25-204ENST00000589577 SEC61BP60468 96 aaKnown RBP3.43□□□□□ -1.86
VPS25-204ENST00000589577 FAM229BQ4G0N7 80 aa3.43□□□□□ -1.86
VPS25-204ENST00000589577 C9orf153Q5TBE3 101 aa3.43□□□□□ -1.86
VPS25-204ENST00000589577 ANAPC11Q9NYG5 84 aa3.43□□□□□ -1.86
VPS25-204ENST00000589577 NEBP20929 6669 aa3.43□□□□□ -1.86
VPS25-204ENST00000589577 C9JAW5 83 aa3.42□□□□□ -1.86
VPS25-204ENST00000589577 ERC2-IT1O76042 136 aa3.42□□□□□ -1.86
VPS25-204ENST00000589577 KRTAP19-1Q8IUB9 90 aa3.42□□□□□ -1.86
VPS25-204ENST00000589577 LINC00304Q8N9R0 145 aa3.42□□□□□ -1.86
VPS25-204ENST00000589577 FAM218AQ96MZ4 157 aa3.42□□□□□ -1.86
VPS25-204ENST00000589577 IGLV5-48A0A075B6I7 105 aa3.41□□□□□ -1.86
VPS25-204ENST00000589577 IGLV9-49A0A0B4J1Y8 123 aa3.41□□□□□ -1.86
VPS25-204ENST00000589577 H3BMG7 143 aa3.41□□□□□ -1.86
VPS25-204ENST00000589577 H3BT86 120 aa3.41□□□□□ -1.86
VPS25-204ENST00000589577 K7EP34 96 aa3.41□□□□□ -1.86
VPS25-204ENST00000589577 BAALC-AS2P0C853 105 aa3.41□□□□□ -1.86
VPS25-204ENST00000589577 SPRR1BP22528 89 aa3.41□□□□□ -1.86
VPS25-204ENST00000589577 C21orf62-AS1Q17RA5 79 aa3.41□□□□□ -1.86
VPS25-204ENST00000589577 ST20-AS1Q8NBB2 130 aa3.41□□□□□ -1.86
VPS25-204ENST00000589577 Q8NBF4 154 aa3.41□□□□□ -1.86
VPS25-204ENST00000589577 JMJD7-PLA2G4BH0Y9G9 81 aa3.4□□□□□ -1.87
VPS25-204ENST00000589577 NDUFV3P56181 108 aaKnown RBP3.4□□□□□ -1.87
VPS25-204ENST00000589577 UBE2V1Q13404 147 aa3.4□□□□□ -1.87
VPS25-204ENST00000589577 MOBPQ13875 183 aa3.4□□□□□ -1.87
VPS25-204ENST00000589577 LINC00483Q53H64 154 aa3.4□□□□□ -1.87
VPS25-204ENST00000589577 Q6JHZ5 121 aa3.4□□□□□ -1.87
VPS25-204ENST00000589577 ANKRD29Q8N6D5 301 aa3.4□□□□□ -1.87
VPS25-204ENST00000589577 DSCR8Q96T75 97 aa3.4□□□□□ -1.87
VPS25-204ENST00000589577 M0R2T5 61 aa3.39□□□□□ -1.87
VPS25-204ENST00000589577 FP248Q71RG6 208 aaPredicted RBP3.39□□□□□ -1.87
VPS25-204ENST00000589577 SSBP3-AS1Q7Z2R9 100 aa3.39□□□□□ -1.87
VPS25-204ENST00000589577 Q8N377 158 aa3.39□□□□□ -1.87
VPS25-204ENST00000589577 F8W1H4 67 aa3.38□□□□□ -1.87
VPS25-204ENST00000589577 PDE6GP18545 87 aa3.38□□□□□ -1.87
VPS25-204ENST00000589577 RBM3P98179 157 aaKnown RBP3.38□□□□□ -1.87
VPS25-204ENST00000589577 SPAG11AQ6PDA7 123 aa3.38□□□□□ -1.87
VPS25-204ENST00000589577 A0A1B0GV72 72 aa3.37□□□□□ -1.87
VPS25-204ENST00000589577 C3orf22Q8N5N4 141 aa3.37□□□□□ -1.87
VPS25-204ENST00000589577 A0A1B0GV90 55 aa3.36□□□□□ -1.87
VPS25-204ENST00000589577 MTURNQ8N3F0 131 aa3.36□□□□□ -1.87
VPS25-204ENST00000589577 VPS25Q9BRG1 176 aa3.36□□□□□ -1.87
VPS25-204ENST00000589577 LIMD2Q9BT23 127 aa3.36□□□□□ -1.87
VPS25-204ENST00000589577 IGLV8-61A0A075B6I0 122 aa3.35□□□□□ -1.87
VPS25-204ENST00000589577 KRTAP6-3Q3LI67 103 aa3.35□□□□□ -1.87
VPS25-204ENST00000589577 SS18L2Q9UHA2 77 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms