RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 PRLHP81277 87 aa6.47□□□□□ -1.37
VPS25-203ENST00000589520 NREPQ16612 68 aa6.47□□□□□ -1.37
VPS25-203ENST00000589520 SMIM29Q86T20 159 aa6.47□□□□□ -1.37
VPS25-203ENST00000589520 SPRR4Q96PI1 79 aa6.47□□□□□ -1.37
VPS25-203ENST00000589520 HAMPP81172 84 aa6.46□□□□□ -1.38
VPS25-203ENST00000589520 Q8NBF4 154 aa6.46□□□□□ -1.38
VPS25-203ENST00000589520 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.46□□□□□ -1.38
VPS25-203ENST00000589520 DNAH6Q9C0G6 4158 aa6.44□□□□□ -1.38
VPS25-203ENST00000589520 PANO1I0J062 215 aa6.44□□□□□ -1.38
VPS25-203ENST00000589520 KRTAP13-1Q8IUC0 172 aa6.44□□□□□ -1.38
VPS25-203ENST00000589520 ZNF706Q9Y5V0 76 aaPredicted RBP6.44□□□□□ -1.38
VPS25-203ENST00000589520 DNAH17Q9UFH2 4485 aa6.44□□□□□ -1.38
VPS25-203ENST00000589520 A0A1W2PNM2 257 aa6.43□□□□□ -1.38
VPS25-203ENST00000589520 CRYGAP11844 174 aa6.43□□□□□ -1.38
VPS25-203ENST00000589520 RPL37AP61513 92 aaKnown RBP6.43□□□□□ -1.38
VPS25-203ENST00000589520 KRTAP11-1Q8IUC1 163 aa6.43□□□□□ -1.38
VPS25-203ENST00000589520 DNAH2Q9P225 4427 aa6.43□□□□□ -1.38
VPS25-203ENST00000589520 FRAS1Q86XX4 4008 aa6.42□□□□□ -1.38
VPS25-203ENST00000589520 LCE6AA0A183 80 aa6.42□□□□□ -1.38
VPS25-203ENST00000589520 C3orf22Q8N5N4 141 aa6.42□□□□□ -1.38
VPS25-203ENST00000589520 UBR4Q5T4S7 5183 aa6.41□□□□□ -1.38
VPS25-203ENST00000589520 SMIM20Q8N5G0 67 aa6.41□□□□□ -1.38
VPS25-203ENST00000589520 ABCA13Q86UQ4 5058 aa6.4□□□□□ -1.38
VPS25-203ENST00000589520 BPY2O14599 106 aa6.4□□□□□ -1.38
VPS25-203ENST00000589520 UQCRQO14949 82 aa6.4□□□□□ -1.38
VPS25-203ENST00000589520 ZNF861PO60384 105 aa6.4□□□□□ -1.38
VPS25-203ENST00000589520 IGFL1Q6UW32 110 aa6.4□□□□□ -1.38
VPS25-203ENST00000589520 ALMS1Q8TCU4 4167 aa6.38□□□□□ -1.39
VPS25-203ENST00000589520 KIAA1109Q2LD37 5005 aa6.38□□□□□ -1.39
VPS25-203ENST00000589520 A0A087WVE0 104 aa6.38□□□□□ -1.39
VPS25-203ENST00000589520 COX7CP15954 63 aa6.38□□□□□ -1.39
VPS25-203ENST00000589520 LINC00483Q53H64 154 aa6.38□□□□□ -1.39
VPS25-203ENST00000589520 SERP2Q8N6R1 65 aa6.38□□□□□ -1.39
VPS25-203ENST00000589520 PSORS1C2Q9UIG4 136 aa6.38□□□□□ -1.39
VPS25-203ENST00000589520 CCDC179H3BU77 68 aa6.34□□□□□ -1.39
VPS25-203ENST00000589520 IGLV7-43P04211 117 aa6.33□□□□□ -1.4
VPS25-203ENST00000589520 KRTAP10-2P60368 255 aa6.33□□□□□ -1.4
VPS25-203ENST00000589520 LINC00336Q6ZUF6 198 aa6.33□□□□□ -1.4
VPS25-203ENST00000589520 DNAH8Q96JB1 4490 aa6.33□□□□□ -1.4
VPS25-203ENST00000589520 TRAV7A0A075B6U4 112 aa6.32□□□□□ -1.4
VPS25-203ENST00000589520 Q6ZSA8 131 aa6.32□□□□□ -1.4
VPS25-203ENST00000589520 KMT2AQ03164 3969 aa6.32□□□□□ -1.4
VPS25-203ENST00000589520 HECTD4Q9Y4D8 3996 aa6.32□□□□□ -1.4
VPS25-203ENST00000589520 A0A087WSZ3 146 aa6.31□□□□□ -1.4
VPS25-203ENST00000589520 IGKV4-1P06312 121 aa6.31□□□□□ -1.4
VPS25-203ENST00000589520 C9orf153Q5TBE3 101 aa6.31□□□□□ -1.4
VPS25-203ENST00000589520 SCXQ7RTU7 201 aa6.31□□□□□ -1.4
VPS25-203ENST00000589520 CIRBP-AS1Q8TBR5 109 aa6.31□□□□□ -1.4
VPS25-203ENST00000589520 J3KT08 172 aa6.3□□□□□ -1.4
VPS25-203ENST00000589520 SS18L2Q9UHA2 77 aa6.29□□□□□ -1.4
VPS25-203ENST00000589520 DNAH11Q96DT5 4516 aa6.28□□□□□ -1.4
VPS25-203ENST00000589520 DSCR10P59022 87 aa6.27□□□□□ -1.41
VPS25-203ENST00000589520 SSBP3-AS1Q7Z2R9 100 aa6.27□□□□□ -1.41
VPS25-203ENST00000589520 FAM30AQ9NZY2 134 aa6.27□□□□□ -1.41
VPS25-203ENST00000589520 HERC1Q15751 4861 aa6.27□□□□□ -1.41
VPS25-203ENST00000589520 DNAH5Q8TE73 4624 aa6.26□□□□□ -1.41
VPS25-203ENST00000589520 IGLV9-49A0A0B4J1Y8 123 aa6.26□□□□□ -1.41
VPS25-203ENST00000589520 KRTAP10-1P60331 282 aa6.26□□□□□ -1.41
VPS25-203ENST00000589520 LINC00472Q9H8W2 130 aa6.26□□□□□ -1.41
VPS25-203ENST00000589520 CD164Q04900 197 aa6.25□□□□□ -1.41
VPS25-203ENST00000589520 A0A0G2JQZ4 141 aa6.23□□□□□ -1.41
VPS25-203ENST00000589520 A8MWP4 228 aa6.23□□□□□ -1.41
VPS25-203ENST00000589520 NDUFB1O75438 58 aa6.23□□□□□ -1.41
VPS25-203ENST00000589520 FAM229BQ4G0N7 80 aa6.23□□□□□ -1.41
VPS25-203ENST00000589520 Q8N9L7 120 aa6.23□□□□□ -1.41
VPS25-203ENST00000589520 HCG22E2RYF7 251 aa6.22□□□□□ -1.41
VPS25-203ENST00000589520 K7EQZ3 153 aa6.22□□□□□ -1.41
VPS25-203ENST00000589520 MOBPQ13875 183 aa6.22□□□□□ -1.41
VPS25-203ENST00000589520 NDUFC1O43677 76 aa6.21□□□□□ -1.42
VPS25-203ENST00000589520 PRR15Q8IV56 129 aa6.21□□□□□ -1.42
VPS25-203ENST00000589520 KRTAP4-5Q9BYR2 181 aa6.21□□□□□ -1.42
VPS25-203ENST00000589520 OCR1Q9BZK8 76 aa6.21□□□□□ -1.42
VPS25-203ENST00000589520 KLKP1Q107X0 134 aa6.2□□□□□ -1.42
VPS25-203ENST00000589520 FAT2Q9NYQ8 4349 aa6.19□□□□□ -1.42
VPS25-203ENST00000589520 TMEM258P61165 79 aa6.19□□□□□ -1.42
VPS25-203ENST00000589520 C20orf197Q8N268 126 aa6.18□□□□□ -1.42
VPS25-203ENST00000589520 CDK2AP2O75956 126 aa6.17□□□□□ -1.42
VPS25-203ENST00000589520 ASB16-AS1Q495Z4 193 aa6.17□□□□□ -1.42
VPS25-203ENST00000589520 C5orf47Q569G3 176 aa6.17□□□□□ -1.42
VPS25-203ENST00000589520 DEFB116Q30KQ4 102 aa6.16□□□□□ -1.42
VPS25-203ENST00000589520 ANAPC11Q9NYG5 84 aa6.16□□□□□ -1.42
VPS25-203ENST00000589520 A0A1B0GVY2 172 aa6.15□□□□□ -1.42
VPS25-203ENST00000589520 Q5XG85 94 aa6.15□□□□□ -1.42
VPS25-203ENST00000589520 SPINK6Q6UWN8 80 aa6.15□□□□□ -1.42
VPS25-203ENST00000589520 TMEM254Q8TBM7 123 aa6.15□□□□□ -1.42
VPS25-203ENST00000589520 Q96NJ1 140 aa6.15□□□□□ -1.42
VPS25-203ENST00000589520 KRTAP29-1A8MX34 341 aaPredicted RBP6.14□□□□□ -1.43
VPS25-203ENST00000589520 HRCT1Q6UXD1 115 aa6.14□□□□□ -1.43
VPS25-203ENST00000589520 CASC2Q6XLA1 102 aa6.14□□□□□ -1.43
VPS25-203ENST00000589520 H3BPC8 53 aa6.12□□□□□ -1.43
VPS25-203ENST00000589520 PKD1P98161 4303 aa6.12□□□□□ -1.43
VPS25-203ENST00000589520 A0A0U1RQV1 116 aa6.11□□□□□ -1.43
VPS25-203ENST00000589520 ATP5EP56381 51 aaPredicted RBP6.11□□□□□ -1.43
VPS25-203ENST00000589520 RPS28P62857 69 aaKnown RBP6.11□□□□□ -1.43
VPS25-203ENST00000589520 WFDC13Q8IUB5 93 aa6.11□□□□□ -1.43
VPS25-203ENST00000589520 LRP1BQ9NZR2 4599 aa6.11□□□□□ -1.43
VPS25-203ENST00000589520 A0A1B0GVX0 72 aa6.1□□□□□ -1.43
VPS25-203ENST00000589520 hDV103S1A0JD37 113 aa6.1□□□□□ -1.43
VPS25-203ENST00000589520 MP68P56378 58 aa6.1□□□□□ -1.43
VPS25-203ENST00000589520 LIMD2Q9BT23 127 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms