RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 FAM236DA0A1B0GTK5 79 aa4.67□□□□□ -1.66
ZNF540-206ENST00000589117 H0Y9J4 135 aa4.67□□□□□ -1.66
ZNF540-206ENST00000589117 FAM236CP0DP71 79 aa4.67□□□□□ -1.66
ZNF540-206ENST00000589117 HIGD2AQ9BW72 106 aa4.67□□□□□ -1.66
ZNF540-206ENST00000589117 A0A1W2PNN7 141 aa4.67□□□□□ -1.66
ZNF540-206ENST00000589117 Q8N9L7 120 aa4.67□□□□□ -1.66
ZNF540-206ENST00000589117 C9orf163Q8N9P6 203 aa4.67□□□□□ -1.66
ZNF540-206ENST00000589117 NBDYA0A0U1RRE5 68 aa4.66□□□□□ -1.66
ZNF540-206ENST00000589117 H7BZZ5 65 aa4.66□□□□□ -1.66
ZNF540-206ENST00000589117 UBE2AP49459 152 aa4.66□□□□□ -1.66
ZNF540-206ENST00000589117 ATP5EP56381 51 aaPredicted RBP4.66□□□□□ -1.66
ZNF540-206ENST00000589117 MPLKIPQ8TAP9 179 aa4.66□□□□□ -1.66
ZNF540-206ENST00000589117 PRLHP81277 87 aa4.66□□□□□ -1.66
ZNF540-206ENST00000589117 SMIM29Q86T20 159 aa4.66□□□□□ -1.66
ZNF540-206ENST00000589117 TMEM254Q8TBM7 123 aa4.66□□□□□ -1.66
ZNF540-206ENST00000589117 IGLV8-61A0A075B6I0 122 aa4.65□□□□□ -1.66
ZNF540-206ENST00000589117 SNURFQ9Y675 71 aa4.65□□□□□ -1.66
ZNF540-206ENST00000589117 OCR1Q9BZK8 76 aa4.64□□□□□ -1.67
ZNF540-206ENST00000589117 SERP1Q9Y6X1 66 aa4.64□□□□□ -1.67
ZNF540-206ENST00000589117 MGAM2Q2M2H8 2515 aa4.64□□□□□ -1.67
ZNF540-206ENST00000589117 IGFL1Q6UW32 110 aa4.63□□□□□ -1.67
ZNF540-206ENST00000589117 IGLV9-49A0A0B4J1Y8 123 aa4.63□□□□□ -1.67
ZNF540-206ENST00000589117 EPM2AB3EWF7 344 aa4.63□□□□□ -1.67
ZNF540-206ENST00000589117 PHF5AQ7RTV0 110 aaKnown RBP4.63□□□□□ -1.67
ZNF540-206ENST00000589117 LRCOL1A6NCL2 159 aa4.62□□□□□ -1.67
ZNF540-206ENST00000589117 SPRR1BP22528 89 aa4.62□□□□□ -1.67
ZNF540-206ENST00000589117 CHTF8P0CG12 524 aa4.61□□□□□ -1.67
ZNF540-206ENST00000589117 DSCR10P59022 87 aa4.61□□□□□ -1.67
ZNF540-206ENST00000589117 A0A087WSZ3 146 aa4.61□□□□□ -1.67
ZNF540-206ENST00000589117 HCG22E2RYF7 251 aa4.61□□□□□ -1.67
ZNF540-206ENST00000589117 C5orf47Q569G3 176 aa4.6□□□□□ -1.67
ZNF540-206ENST00000589117 HUWE1Q7Z6Z7 4374 aaKnown RBP4.6□□□□□ -1.67
ZNF540-206ENST00000589117 A0A0U1RQV1 116 aa4.6□□□□□ -1.67
ZNF540-206ENST00000589117 K7EQZ3 153 aa4.6□□□□□ -1.67
ZNF540-206ENST00000589117 STAB2Q8WWQ8 2551 aa4.59□□□□□ -1.67
ZNF540-206ENST00000589117 Q6ZRN7 208 aaPredicted RBP4.58□□□□□ -1.68
ZNF540-206ENST00000589117 ZNF706Q9Y5V0 76 aaPredicted RBP4.58□□□□□ -1.68
ZNF540-206ENST00000589117 DNAH1Q9P2D7 4330 aa4.57□□□□□ -1.68
ZNF540-206ENST00000589117 SMIM26A0A096LP01 95 aa4.57□□□□□ -1.68
ZNF540-206ENST00000589117 RPL37AP61513 92 aaKnown RBP4.57□□□□□ -1.68
ZNF540-206ENST00000589117 SPACA4Q8TDM5 124 aa4.57□□□□□ -1.68
ZNF540-206ENST00000589117 LCE6AA0A183 80 aa4.56□□□□□ -1.68
ZNF540-206ENST00000589117 NDUFB1O75438 58 aa4.56□□□□□ -1.68
ZNF540-206ENST00000589117 MP68P56378 58 aa4.56□□□□□ -1.68
ZNF540-206ENST00000589117 COL7A1Q02388 2944 aa4.56□□□□□ -1.68
ZNF540-206ENST00000589117 A0A087WTM6 91 aa4.56□□□□□ -1.68
ZNF540-206ENST00000589117 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
ZNF540-206ENST00000589117 KRTAP11-1Q8IUC1 163 aa4.56□□□□□ -1.68
ZNF540-206ENST00000589117 A0A0G2JQZ4 141 aa4.55□□□□□ -1.68
ZNF540-206ENST00000589117 CDK2AP2O75956 126 aa4.55□□□□□ -1.68
ZNF540-206ENST00000589117 DEFB116Q30KQ4 102 aa4.55□□□□□ -1.68
ZNF540-206ENST00000589117 A8MWP4 228 aa4.55□□□□□ -1.68
ZNF540-206ENST00000589117 OXTP01178 125 aa4.55□□□□□ -1.68
ZNF540-206ENST00000589117 KRTAP13-1Q8IUC0 172 aa4.54□□□□□ -1.68
ZNF540-206ENST00000589117 PRR15Q8IV56 129 aa4.54□□□□□ -1.68
ZNF540-206ENST00000589117 RTL8CO15255 209 aa4.54□□□□□ -1.68
ZNF540-206ENST00000589117 CASC2Q6XLA1 102 aa4.54□□□□□ -1.68
ZNF540-206ENST00000589117 WFDC13Q8IUB5 93 aa4.54□□□□□ -1.68
ZNF540-206ENST00000589117 H3BPC8 53 aa4.53□□□□□ -1.68
ZNF540-206ENST00000589117 LINC00472Q9H8W2 130 aa4.53□□□□□ -1.68
ZNF540-206ENST00000589117 PANO1I0J062 215 aa4.52□□□□□ -1.69
ZNF540-206ENST00000589117 C1orf134Q5TEV5 83 aa4.52□□□□□ -1.69
ZNF540-206ENST00000589117 LINC00483Q53H64 154 aa4.51□□□□□ -1.69
ZNF540-206ENST00000589117 Q5XG85 94 aa4.51□□□□□ -1.69
ZNF540-206ENST00000589117 Q6ZR54 194 aa4.51□□□□□ -1.69
ZNF540-206ENST00000589117 LYSTQ99698 3801 aa4.51□□□□□ -1.69
ZNF540-206ENST00000589117 PLAC8Q9NZF1 115 aa4.51□□□□□ -1.69
ZNF540-206ENST00000589117 SEC61GP60059 68 aa4.51□□□□□ -1.69
ZNF540-206ENST00000589117 LCE4AQ5TA78 99 aa4.51□□□□□ -1.69
ZNF540-206ENST00000589117 TENM2Q9NT68 2774 aa4.5□□□□□ -1.69
ZNF540-206ENST00000589117 KRTAP29-1A8MX34 341 aaPredicted RBP4.5□□□□□ -1.69
ZNF540-206ENST00000589117 ZNF861PO60384 105 aa4.5□□□□□ -1.69
ZNF540-206ENST00000589117 C4orf26Q17RF5 130 aa4.5□□□□□ -1.69
ZNF540-206ENST00000589117 ZCCHC13Q8WW36 166 aaKnown RBP4.5□□□□□ -1.69
ZNF540-206ENST00000589117 PRAC1Q96KF2 57 aa4.5□□□□□ -1.69
ZNF540-206ENST00000589117 KRTAP17-1Q9BYP8 105 aa4.5□□□□□ -1.69
ZNF540-206ENST00000589117 hDV103S1A0JD37 113 aa4.5□□□□□ -1.69
ZNF540-206ENST00000589117 PSORS1C2Q9UIG4 136 aa4.5□□□□□ -1.69
ZNF540-206ENST00000589117 KRTAP9-6A0A140TA67 174 aa4.49□□□□□ -1.69
ZNF540-206ENST00000589117 KRTAP9-7A8MTY7 169 aa4.49□□□□□ -1.69
ZNF540-206ENST00000589117 DNAH9Q9NYC9 4486 aa4.48□□□□□ -1.69
ZNF540-206ENST00000589117 HRCT1Q6UXD1 115 aa4.48□□□□□ -1.69
ZNF540-206ENST00000589117 LINC00208Q96KT6 92 aa4.48□□□□□ -1.69
ZNF540-206ENST00000589117 TP53AIP1Q9HCN2 124 aa4.48□□□□□ -1.69
ZNF540-206ENST00000589117 DNAH10Q8IVF4 4471 aa4.48□□□□□ -1.69
ZNF540-206ENST00000589117 H0Y9P7 68 aa4.47□□□□□ -1.69
ZNF540-206ENST00000589117 MOBPQ13875 183 aa4.47□□□□□ -1.69
ZNF540-206ENST00000589117 CSMD3Q7Z407 3707 aa4.47□□□□□ -1.69
ZNF540-206ENST00000589117 DYNC2H1Q8NCM8 4307 aaKnown RBP4.47□□□□□ -1.69
ZNF540-206ENST00000589117 TRAV22A0A0B4J277 110 aa4.46□□□□□ -1.69
ZNF540-206ENST00000589117 KRTAP19-1Q8IUB9 90 aa4.46□□□□□ -1.69
ZNF540-206ENST00000589117 CYP4F30PQ9H0H9 118 aa4.46□□□□□ -1.69
ZNF540-206ENST00000589117 LY6G6CO95867 125 aa4.46□□□□□ -1.7
ZNF540-206ENST00000589117 FP248Q71RG6 208 aaPredicted RBP4.45□□□□□ -1.7
ZNF540-206ENST00000589117 SPANXA2-OT1Q8N9U9 137 aa4.45□□□□□ -1.7
ZNF540-206ENST00000589117 DNAH7Q8WXX0 4024 aa4.45□□□□□ -1.7
ZNF540-206ENST00000589117 MMP24-AS1A0A0U1RRL7 71 aa4.45□□□□□ -1.7
ZNF540-206ENST00000589117 C1orf64Q8NEQ6 169 aa4.45□□□□□ -1.7
ZNF540-206ENST00000589117 KRTAP9-8Q9BYQ0 159 aa4.45□□□□□ -1.7
ZNF540-206ENST00000589117 SRRM2Q9UQ35 2752 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms