RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 KRTAP7-1Q8IUC3 87 aa4.54□□□□□ -1.68
SPIDR-228ENST00000588781 C9orf163Q8N9P6 203 aa4.54□□□□□ -1.68
SPIDR-228ENST00000588781 TMEM254Q8TBM7 123 aa4.54□□□□□ -1.68
SPIDR-228ENST00000588781 LINC00476Q8WZB0 136 aa4.54□□□□□ -1.68
SPIDR-228ENST00000588781 LYSTQ99698 3801 aa4.53□□□□□ -1.68
SPIDR-228ENST00000588781 SMIM29Q86T20 159 aa4.53□□□□□ -1.68
SPIDR-228ENST00000588781 OCR1Q9BZK8 76 aa4.53□□□□□ -1.68
SPIDR-228ENST00000588781 HERC2O95714 4834 aa4.53□□□□□ -1.68
SPIDR-228ENST00000588781 A0A1W2PNN7 141 aa4.52□□□□□ -1.69
SPIDR-228ENST00000588781 WWC2-AS2Q96NR7 200 aa4.52□□□□□ -1.69
SPIDR-228ENST00000588781 HIGD2AQ9BW72 106 aa4.52□□□□□ -1.69
SPIDR-228ENST00000588781 CYSTM1Q9H1C7 97 aa4.52□□□□□ -1.69
SPIDR-228ENST00000588781 DNAH7Q8WXX0 4024 aa4.51□□□□□ -1.69
SPIDR-228ENST00000588781 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.51□□□□□ -1.69
SPIDR-228ENST00000588781 A0A0U1RQV1 116 aa4.51□□□□□ -1.69
SPIDR-228ENST00000588781 RPL37AP61513 92 aaKnown RBP4.51□□□□□ -1.69
SPIDR-228ENST00000588781 C5orf47Q569G3 176 aa4.51□□□□□ -1.69
SPIDR-228ENST00000588781 IGFL1Q6UW32 110 aa4.51□□□□□ -1.69
SPIDR-228ENST00000588781 KRTAP1-5Q9BYS1 174 aa4.51□□□□□ -1.69
SPIDR-228ENST00000588781 ZNF706Q9Y5V0 76 aaPredicted RBP4.51□□□□□ -1.69
SPIDR-228ENST00000588781 SNURFQ9Y675 71 aa4.51□□□□□ -1.69
SPIDR-228ENST00000588781 EPM2AB3EWF7 344 aa4.5□□□□□ -1.69
SPIDR-228ENST00000588781 HCG22E2RYF7 251 aa4.5□□□□□ -1.69
SPIDR-228ENST00000588781 PRLHP81277 87 aa4.5□□□□□ -1.69
SPIDR-228ENST00000588781 Q8N9L7 120 aa4.5□□□□□ -1.69
SPIDR-228ENST00000588781 SMIM26A0A096LP01 95 aa4.49□□□□□ -1.69
SPIDR-228ENST00000588781 LRCOL1A6NCL2 159 aa4.49□□□□□ -1.69
SPIDR-228ENST00000588781 PHF5AQ7RTV0 110 aaKnown RBP4.49□□□□□ -1.69
SPIDR-228ENST00000588781 LCE6AA0A183 80 aa4.48□□□□□ -1.69
SPIDR-228ENST00000588781 H3BPC8 53 aa4.48□□□□□ -1.69
SPIDR-228ENST00000588781 NDUFB1O75438 58 aa4.48□□□□□ -1.69
SPIDR-228ENST00000588781 DSCR10P59022 87 aa4.48□□□□□ -1.69
SPIDR-228ENST00000588781 A0A087WSZ3 146 aa4.47□□□□□ -1.69
SPIDR-228ENST00000588781 MP68P56378 58 aa4.47□□□□□ -1.69
SPIDR-228ENST00000588781 STAB2Q8WWQ8 2551 aa4.47□□□□□ -1.69
SPIDR-228ENST00000588781 CSMD3Q7Z407 3707 aa4.46□□□□□ -1.69
SPIDR-228ENST00000588781 K7EQZ3 153 aa4.46□□□□□ -1.7
SPIDR-228ENST00000588781 CHTF8P0CG12 524 aa4.46□□□□□ -1.7
SPIDR-228ENST00000588781 Q6ZRN7 208 aaPredicted RBP4.46□□□□□ -1.7
SPIDR-228ENST00000588781 FAM30AQ9NZY2 134 aa4.46□□□□□ -1.7
SPIDR-228ENST00000588781 A8MWP4 228 aa4.45□□□□□ -1.7
SPIDR-228ENST00000588781 SPACA4Q8TDM5 124 aa4.45□□□□□ -1.7
SPIDR-228ENST00000588781 A0A087WTM6 91 aa4.44□□□□□ -1.7
SPIDR-228ENST00000588781 PRR15Q8IV56 129 aa4.44□□□□□ -1.7
SPIDR-228ENST00000588781 CASC2Q6XLA1 102 aa4.43□□□□□ -1.7
SPIDR-228ENST00000588781 KRTAP13-1Q8IUC0 172 aa4.43□□□□□ -1.7
SPIDR-228ENST00000588781 HUWE1Q7Z6Z7 4374 aaKnown RBP4.42□□□□□ -1.7
SPIDR-228ENST00000588781 FRAS1Q86XX4 4008 aa4.42□□□□□ -1.7
SPIDR-228ENST00000588781 hDV103S1A0JD37 113 aa4.42□□□□□ -1.7
SPIDR-228ENST00000588781 OXTP01178 125 aa4.42□□□□□ -1.7
SPIDR-228ENST00000588781 LINC00483Q53H64 154 aa4.42□□□□□ -1.7
SPIDR-228ENST00000588781 PLECQ15149 4684 aaKnown RBP4.41□□□□□ -1.7
SPIDR-228ENST00000588781 RTL8CO15255 209 aa4.41□□□□□ -1.7
SPIDR-228ENST00000588781 CDK2AP2O75956 126 aa4.41□□□□□ -1.7
SPIDR-228ENST00000588781 WFDC13Q8IUB5 93 aa4.41□□□□□ -1.7
SPIDR-228ENST00000588781 ZCCHC13Q8WW36 166 aaKnown RBP4.41□□□□□ -1.7
SPIDR-228ENST00000588781 LINC00472Q9H8W2 130 aa4.41□□□□□ -1.7
SPIDR-228ENST00000588781 TP53AIP1Q9HCN2 124 aa4.41□□□□□ -1.7
SPIDR-228ENST00000588781 STARD9Q9P2P6 4700 aa4.41□□□□□ -1.7
SPIDR-228ENST00000588781 MOBPQ13875 183 aa4.4□□□□□ -1.71
SPIDR-228ENST00000588781 Q5XG85 94 aa4.4□□□□□ -1.71
SPIDR-228ENST00000588781 PLAC8Q9NZF1 115 aa4.4□□□□□ -1.71
SPIDR-228ENST00000588781 IGLV5-52A0A0A0MRZ9 124 aa4.39□□□□□ -1.71
SPIDR-228ENST00000588781 KRTAP29-1A8MX34 341 aaPredicted RBP4.39□□□□□ -1.71
SPIDR-228ENST00000588781 C1orf134Q5TEV5 83 aa4.39□□□□□ -1.71
SPIDR-228ENST00000588781 Q6ZR54 194 aa4.39□□□□□ -1.71
SPIDR-228ENST00000588781 KRTAP11-1Q8IUC1 163 aa4.39□□□□□ -1.71
SPIDR-228ENST00000588781 CYP4F30PQ9H0H9 118 aa4.39□□□□□ -1.71
SPIDR-228ENST00000588781 H0Y9P7 68 aa4.38□□□□□ -1.71
SPIDR-228ENST00000588781 ZNF861PO60384 105 aa4.38□□□□□ -1.71
SPIDR-228ENST00000588781 SPANXA2-OT1Q8N9U9 137 aa4.38□□□□□ -1.71
SPIDR-228ENST00000588781 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.38□□□□□ -1.71
SPIDR-228ENST00000588781 IGLV9-49A0A0B4J1Y8 123 aa4.37□□□□□ -1.71
SPIDR-228ENST00000588781 TRAV22A0A0B4J277 110 aa4.37□□□□□ -1.71
SPIDR-228ENST00000588781 C4orf26Q17RF5 130 aa4.37□□□□□ -1.71
SPIDR-228ENST00000588781 DEFB116Q30KQ4 102 aa4.37□□□□□ -1.71
SPIDR-228ENST00000588781 HRCT1Q6UXD1 115 aa4.37□□□□□ -1.71
SPIDR-228ENST00000588781 V9GYY9 64 aa4.37□□□□□ -1.71
SPIDR-228ENST00000588781 A0A0G2JQZ4 141 aa4.36□□□□□ -1.71
SPIDR-228ENST00000588781 CD164Q04900 197 aa4.36□□□□□ -1.71
SPIDR-228ENST00000588781 LINC00208Q96KT6 92 aa4.36□□□□□ -1.71
SPIDR-228ENST00000588781 PSORS1C2Q9UIG4 136 aa4.36□□□□□ -1.71
SPIDR-228ENST00000588781 KIAA1109Q2LD37 5005 aa4.36□□□□□ -1.71
SPIDR-228ENST00000588781 MMP24-AS1A0A0U1RRL7 71 aa4.35□□□□□ -1.71
SPIDR-228ENST00000588781 PANO1I0J062 215 aa4.35□□□□□ -1.71
SPIDR-228ENST00000588781 ALMS1Q8TCU4 4167 aa4.35□□□□□ -1.71
SPIDR-228ENST00000588781 HECTD4Q9Y4D8 3996 aa4.34□□□□□ -1.71
SPIDR-228ENST00000588781 A0A1B0GVX0 72 aa4.34□□□□□ -1.71
SPIDR-228ENST00000588781 SSBP3-AS1Q7Z2R9 100 aa4.34□□□□□ -1.71
SPIDR-228ENST00000588781 DNAH10Q8IVF4 4471 aa4.34□□□□□ -1.72
SPIDR-228ENST00000588781 IGLV7-43P04211 117 aa4.33□□□□□ -1.72
SPIDR-228ENST00000588781 FP248Q71RG6 208 aaPredicted RBP4.33□□□□□ -1.72
SPIDR-228ENST00000588781 C1orf64Q8NEQ6 169 aa4.33□□□□□ -1.72
SPIDR-228ENST00000588781 C8orf17Q9NRJ1 99 aa4.33□□□□□ -1.72
SPIDR-228ENST00000588781 C8orf87E5RJ46 101 aa4.32□□□□□ -1.72
SPIDR-228ENST00000588781 ASB16-AS1Q495Z4 193 aa4.32□□□□□ -1.72
SPIDR-228ENST00000588781 ABCA13Q86UQ4 5058 aa4.31□□□□□ -1.72
SPIDR-228ENST00000588781 LY6G6CO95867 125 aa4.31□□□□□ -1.72
SPIDR-228ENST00000588781 Q1T7F1 81 aa4.31□□□□□ -1.72
SPIDR-228ENST00000588781 Q96NJ1 140 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms