RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 SPRR1BP22528 89 aa13.53□□□□□ -0.24
ACTN4-210ENST00000588618 LAMTOR3Q9UHA4 124 aa13.53□□□□□ -0.24
ACTN4-210ENST00000588618 KRTAP4-5Q9BYR2 181 aa13.53□□□□□ -0.24
ACTN4-210ENST00000588618 KRTAP1-4P0C5Y4 121 aa13.5□□□□□ -0.25
ACTN4-210ENST00000588618 PRO0461Q9UI25 63 aa13.5□□□□□ -0.25
ACTN4-210ENST00000588618 FAT3Q8TDW7 4589 aa13.5□□□□□ -0.25
ACTN4-210ENST00000588618 F8WEM9 126 aa13.5□□□□□ -0.25
ACTN4-210ENST00000588618 FAM229BQ4G0N7 80 aa13.5□□□□□ -0.25
ACTN4-210ENST00000588618 C3orf22Q8N5N4 141 aa13.5□□□□□ -0.25
ACTN4-210ENST00000588618 ABCA13Q86UQ4 5058 aa13.49□□□□□ -0.25
ACTN4-210ENST00000588618 SMCPP49901 116 aaPredicted RBP13.49□□□□□ -0.25
ACTN4-210ENST00000588618 MYCBP2O75592 4640 aa13.48□□□□□ -0.25
ACTN4-210ENST00000588618 H3BT86 120 aa13.48□□□□□ -0.25
ACTN4-210ENST00000588618 CRYGAP11844 174 aa13.48□□□□□ -0.25
ACTN4-210ENST00000588618 SMIM29Q86T20 159 aa13.47□□□□□ -0.25
ACTN4-210ENST00000588618 IGLV9-49A0A0B4J1Y8 123 aa13.47□□□□□ -0.25
ACTN4-210ENST00000588618 UBE2V1Q13404 147 aa13.47□□□□□ -0.25
ACTN4-210ENST00000588618 NDUFV3P56181 108 aaKnown RBP13.46□□□□□ -0.25
ACTN4-210ENST00000588618 ANKRD29Q8N6D5 301 aa13.46□□□□□ -0.25
ACTN4-210ENST00000588618 C9orf153Q5TBE3 101 aa13.45□□□□□ -0.26
ACTN4-210ENST00000588618 FLG2Q5D862 2391 aaPredicted RBP13.45□□□□□ -0.26
ACTN4-210ENST00000588618 A0A087X002 238 aa13.43□□□□□ -0.26
ACTN4-210ENST00000588618 F8W1H4 67 aa13.42□□□□□ -0.26
ACTN4-210ENST00000588618 A0A1B0GV72 72 aa13.41□□□□□ -0.26
ACTN4-210ENST00000588618 MOBPQ13875 183 aa13.4□□□□□ -0.26
ACTN4-210ENST00000588618 PRR26Q8N8Z3 221 aa13.39□□□□□ -0.27
ACTN4-210ENST00000588618 LINC01600Q96MT4 127 aa13.39□□□□□ -0.27
ACTN4-210ENST00000588618 Q8NBF4 154 aa13.38□□□□□ -0.27
ACTN4-210ENST00000588618 TNXBP22105 4242 aa13.37□□□□□ -0.27
ACTN4-210ENST00000588618 TYMSOSQ8TAI1 123 aa13.37□□□□□ -0.27
ACTN4-210ENST00000588618 JMJD7-PLA2G4BH0Y9G9 81 aa13.36□□□□□ -0.27
ACTN4-210ENST00000588618 KRTAP13-2Q52LG2 175 aa13.36□□□□□ -0.27
ACTN4-210ENST00000588618 RBM3P98179 157 aaKnown RBP13.35□□□□□ -0.27
ACTN4-210ENST00000588618 SSBP3-AS1Q7Z2R9 100 aa13.33□□□□□ -0.28
ACTN4-210ENST00000588618 Q6JHZ5 121 aa13.32□□□□□ -0.28
ACTN4-210ENST00000588618 DSCR8Q96T75 97 aa13.32□□□□□ -0.28
ACTN4-210ENST00000588618 IGLV8-61A0A075B6I0 122 aa13.31□□□□□ -0.28
ACTN4-210ENST00000588618 OXTP01178 125 aa13.3□□□□□ -0.28
ACTN4-210ENST00000588618 A0A0G2JQZ4 141 aa13.28□□□□□ -0.28
ACTN4-210ENST00000588618 OBSCN-AS1Q96MR7 158 aa13.27□□□□□ -0.28
ACTN4-210ENST00000588618 ETDBQ3ZM63 59 aa13.27□□□□□ -0.29
ACTN4-210ENST00000588618 IGFL1Q6UW32 110 aa13.26□□□□□ -0.29
ACTN4-210ENST00000588618 TEN1Q86WV5 123 aa13.26□□□□□ -0.29
ACTN4-210ENST00000588618 C14orf132Q9NPU4 83 aa13.25□□□□□ -0.29
ACTN4-210ENST00000588618 C4orf48Q5BLP8 95 aa13.24□□□□□ -0.29
ACTN4-210ENST00000588618 TRBV7-4A0A0J9YYF1 115 aa13.22□□□□□ -0.29
ACTN4-210ENST00000588618 PDE6GP18545 87 aa13.22□□□□□ -0.29
ACTN4-210ENST00000588618 KRTAP29-1A8MX34 341 aaPredicted RBP13.21□□□□□ -0.3
ACTN4-210ENST00000588618 KRTAP10-8P60410 259 aa13.21□□□□□ -0.3
ACTN4-210ENST00000588618 LINC00304Q8N9R0 145 aa13.21□□□□□ -0.3
ACTN4-210ENST00000588618 VPS25Q9BRG1 176 aa13.2□□□□□ -0.3
ACTN4-210ENST00000588618 HRCT1Q6UXD1 115 aa13.19□□□□□ -0.3
ACTN4-210ENST00000588618 LOC110117498A0A087WWA1 95 aa13.19□□□□□ -0.3
ACTN4-210ENST00000588618 CCKP06307 115 aa13.19□□□□□ -0.3
ACTN4-210ENST00000588618 PCLOQ9Y6V0 5065 aa13.18□□□□□ -0.3
ACTN4-210ENST00000588618 SPAG11AQ6PDA7 123 aa13.16□□□□□ -0.3
ACTN4-210ENST00000588618 J3QL48 77 aa13.16□□□□□ -0.3
ACTN4-210ENST00000588618 C21orf62-AS1Q17RA5 79 aa13.16□□□□□ -0.3
ACTN4-210ENST00000588618 Q6ZQT0 140 aa13.16□□□□□ -0.3
ACTN4-210ENST00000588618 CD164Q04900 197 aa13.15□□□□□ -0.3
ACTN4-210ENST00000588618 MT1HL1P0DM35 61 aa13.14□□□□□ -0.31
ACTN4-210ENST00000588618 A0A1W2PNM2 257 aa13.13□□□□□ -0.31
ACTN4-210ENST00000588618 SPINK1P00995 79 aa13.12□□□□□ -0.31
ACTN4-210ENST00000588618 Q6Q795 121 aa13.11□□□□□ -0.31
ACTN4-210ENST00000588618 TRBV7-7A0A0K0K1E9 115 aa13.09□□□□□ -0.31
ACTN4-210ENST00000588618 LIMD2Q9BT23 127 aa13.06□□□□□ -0.32
ACTN4-210ENST00000588618 A0A087WSZ3 146 aa13.05□□□□□ -0.32
ACTN4-210ENST00000588618 DMBT1Q9UGM3 2413 aaPredicted RBP13.05□□□□□ -0.32
ACTN4-210ENST00000588618 A0A1B0GW54 56 aa13.03□□□□□ -0.32
ACTN4-210ENST00000588618 RPS29P62273 56 aaKnown RBP13.03□□□□□ -0.32
ACTN4-210ENST00000588618 SS18L2Q9UHA2 77 aa13.02□□□□□ -0.32
ACTN4-210ENST00000588618 J3QR89 54 aa12.96□□□□□ -0.33
ACTN4-210ENST00000588618 Q5XG85 94 aa12.96□□□□□ -0.34
ACTN4-210ENST00000588618 ACYP1P07311 99 aa12.9□□□□□ -0.34
ACTN4-210ENST00000588618 NREPQ16612 68 aa12.89□□□□□ -0.35
ACTN4-210ENST00000588618 FAM240AA0A1B0GVK7 77 aa12.88□□□□□ -0.35
ACTN4-210ENST00000588618 ASB16-AS1Q495Z4 193 aa12.88□□□□□ -0.35
ACTN4-210ENST00000588618 UBL5Q9BZL1 73 aa12.88□□□□□ -0.35
ACTN4-210ENST00000588618 LINC00846Q9NV44 126 aa12.88□□□□□ -0.35
ACTN4-210ENST00000588618 RETNLBQ9BQ08 111 aa12.85□□□□□ -0.35
ACTN4-210ENST00000588618 K7ERU9 68 aa12.83□□□□□ -0.36
ACTN4-210ENST00000588618 HERC1Q15751 4861 aa12.83□□□□□ -0.36
ACTN4-210ENST00000588618 C1orf195Q5TG92 126 aa12.82□□□□□ -0.36
ACTN4-210ENST00000588618 Q6ZVQ6 151 aa12.81□□□□□ -0.36
ACTN4-210ENST00000588618 Q96NJ1 140 aa12.81□□□□□ -0.36
ACTN4-210ENST00000588618 DEFB116Q30KQ4 102 aa12.79□□□□□ -0.36
ACTN4-210ENST00000588618 LINC00472Q9H8W2 130 aa12.79□□□□□ -0.36
ACTN4-210ENST00000588618 IGKV4-1P06312 121 aa12.76□□□□□ -0.37
ACTN4-210ENST00000588618 SIGMAR1Q99720 223 aa12.76□□□□□ -0.37
ACTN4-210ENST00000588618 J3KT08 172 aa12.75□□□□□ -0.37
ACTN4-210ENST00000588618 PRR4Q16378 134 aa12.74□□□□□ -0.37
ACTN4-210ENST00000588618 FP248Q71RG6 208 aaPredicted RBP12.74□□□□□ -0.37
ACTN4-210ENST00000588618 BPY2O14599 106 aa12.73□□□□□ -0.37
ACTN4-210ENST00000588618 CDIP1Q9H305 208 aa12.68□□□□□ -0.38
ACTN4-210ENST00000588618 IGLV7-46A0A075B6I9 117 aa12.67□□□□□ -0.38
ACTN4-210ENST00000588618 NDUFB1O75438 58 aa12.66□□□□□ -0.38
ACTN4-210ENST00000588618 LINC00643Q86TS7 51 aa12.63□□□□□ -0.39
ACTN4-210ENST00000588618 A8MWP4 228 aa12.62□□□□□ -0.39
ACTN4-210ENST00000588618 DSCR10P59022 87 aa12.61□□□□□ -0.39
ACTN4-210ENST00000588618 CXCL6P80162 114 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms