RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 S100A6P06703 90 aa8.51□□□□□ -1.05
ERCC1-206ENST00000588300 MUSTN1Q8IVN3 82 aa8.51□□□□□ -1.05
ERCC1-206ENST00000588300 HIST3H2BBQ8N257 126 aa8.51□□□□□ -1.05
ERCC1-206ENST00000588300 TCL1BO95988 128 aa8.5□□□□□ -1.05
ERCC1-206ENST00000588300 PCP2Q8IVA1 136 aa8.5□□□□□ -1.05
ERCC1-206ENST00000588300 HIST1H2BLQ99880 126 aa8.5□□□□□ -1.05
ERCC1-206ENST00000588300 TRAV13-2A0A0B4J235 113 aa8.49□□□□□ -1.05
ERCC1-206ENST00000588300 HSBP1L1C9JCN9 74 aa8.48□□□□□ -1.05
ERCC1-206ENST00000588300 KRTAP10-6P60371 365 aaPredicted RBP8.48□□□□□ -1.05
ERCC1-206ENST00000588300 SNRPEP62304 92 aaKnown RBP8.48□□□□□ -1.05
ERCC1-206ENST00000588300 SMIM11BQ8TCY0 68 aa8.48□□□□□ -1.05
ERCC1-206ENST00000588300 F8WEM9 126 aa8.47□□□□□ -1.05
ERCC1-206ENST00000588300 M0R2T5 61 aa8.47□□□□□ -1.05
ERCC1-206ENST00000588300 COX6B2Q6YFQ2 88 aa8.47□□□□□ -1.05
ERCC1-206ENST00000588300 VAMP3Q15836 100 aa8.43□□□□□ -1.06
ERCC1-206ENST00000588300 SCGB1D1O95968 90 aa8.4□□□□□ -1.06
ERCC1-206ENST00000588300 Q6JHZ5 121 aa8.4□□□□□ -1.06
ERCC1-206ENST00000588300 LINC00575Q6W349 94 aa8.4□□□□□ -1.06
ERCC1-206ENST00000588300 Q6ZQY7 126 aa8.39□□□□□ -1.07
ERCC1-206ENST00000588300 CLEC2BQ92478 149 aa8.39□□□□□ -1.07
ERCC1-206ENST00000588300 FLGP20930 4061 aaPredicted RBP8.39□□□□□ -1.07
ERCC1-206ENST00000588300 hADV29S1A0JD25 119 aa8.38□□□□□ -1.07
ERCC1-206ENST00000588300 TRBV7-7A0A0K0K1E9 115 aa8.37□□□□□ -1.07
ERCC1-206ENST00000588300 IGFL1Q6UW32 110 aa8.36□□□□□ -1.07
ERCC1-206ENST00000588300 OCIAD2Q56VL3 154 aa8.34□□□□□ -1.07
ERCC1-206ENST00000588300 ATP11AUNQ6ZP68 121 aa8.33□□□□□ -1.08
ERCC1-206ENST00000588300 OBSCN-AS1Q96MR7 158 aa8.33□□□□□ -1.08
ERCC1-206ENST00000588300 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.32□□□□□ -1.08
ERCC1-206ENST00000588300 Q75L30 129 aa8.32□□□□□ -1.08
ERCC1-206ENST00000588300 PPDPFLQ8WWR9 84 aa8.31□□□□□ -1.08
ERCC1-206ENST00000588300 HIST1H4GQ99525 98 aa8.31□□□□□ -1.08
ERCC1-206ENST00000588300 C12orf57Q99622 126 aa8.31□□□□□ -1.08
ERCC1-206ENST00000588300 COX8AP10176 69 aa8.3□□□□□ -1.08
ERCC1-206ENST00000588300 Q6Q795 121 aa8.3□□□□□ -1.08
ERCC1-206ENST00000588300 BVES-AS1Q5T3Y7 98 aa8.29□□□□□ -1.08
ERCC1-206ENST00000588300 SNHG12Q9BXW3 62 aa8.29□□□□□ -1.08
ERCC1-206ENST00000588300 LST1O00453 97 aa8.28□□□□□ -1.08
ERCC1-206ENST00000588300 PAM16Q9Y3D7 125 aa8.28□□□□□ -1.08
ERCC1-206ENST00000588300 SPATA45Q537H7 98 aa8.26□□□□□ -1.09
ERCC1-206ENST00000588300 VAMP8Q9BV40 100 aa8.26□□□□□ -1.09
ERCC1-206ENST00000588300 H3BUT2 72 aa8.25□□□□□ -1.09
ERCC1-206ENST00000588300 Q96NJ1 140 aa8.25□□□□□ -1.09
ERCC1-206ENST00000588300 DLEU1O43261 78 aa8.24□□□□□ -1.09
ERCC1-206ENST00000588300 C14orf144Q96I85 54 aa8.24□□□□□ -1.09
ERCC1-206ENST00000588300 SS18L2Q9UHA2 77 aa8.24□□□□□ -1.09
ERCC1-206ENST00000588300 KRTAP4-8Q9BYQ9 185 aa8.23□□□□□ -1.09
ERCC1-206ENST00000588300 RAB37Q96AX2 223 aa8.22□□□□□ -1.09
ERCC1-206ENST00000588300 HIGD1BQ9P298 99 aa8.2□□□□□ -1.1
ERCC1-206ENST00000588300 SNCGO76070 127 aa8.19□□□□□ -1.1
ERCC1-206ENST00000588300 GHRHP01286 108 aa8.19□□□□□ -1.1
ERCC1-206ENST00000588300 C20orf166-AS1Q96NR2 134 aa8.19□□□□□ -1.1
ERCC1-206ENST00000588300 TEN1Q86WV5 123 aa8.18□□□□□ -1.1
ERCC1-206ENST00000588300 A8MUU9 505 aa8.17□□□□□ -1.1
ERCC1-206ENST00000588300 A0A0B4J2C4 111 aa8.16□□□□□ -1.1
ERCC1-206ENST00000588300 CFC1P0CG37 223 aa8.16□□□□□ -1.1
ERCC1-206ENST00000588300 C2orf91Q6ZV80 131 aa8.16□□□□□ -1.1
ERCC1-206ENST00000588300 TRBV20-1A0A075B6N2 111 aa8.15□□□□□ -1.1
ERCC1-206ENST00000588300 A0A087WSZ3 146 aa8.15□□□□□ -1.1
ERCC1-206ENST00000588300 TMEM238LA0A1B0GVL6 79 aa8.15□□□□□ -1.1
ERCC1-206ENST00000588300 H0YGX0 51 aa8.15□□□□□ -1.1
ERCC1-206ENST00000588300 NDUFV3P56181 108 aaKnown RBP8.15□□□□□ -1.1
ERCC1-206ENST00000588300 CEND1Q8N111 149 aa8.13□□□□□ -1.11
ERCC1-206ENST00000588300 TMA7Q9Y2S6 64 aaKnown RBP8.13□□□□□ -1.11
ERCC1-206ENST00000588300 FAM218AQ96MZ4 157 aa8.12□□□□□ -1.11
ERCC1-206ENST00000588300 H3BMG7 143 aa8.1□□□□□ -1.11
ERCC1-206ENST00000588300 DSCR10P59022 87 aa8.1□□□□□ -1.11
ERCC1-206ENST00000588300 KRTAP9-8Q9BYQ0 159 aa8.1□□□□□ -1.11
ERCC1-206ENST00000588300 FXYD2P54710 66 aa8.09□□□□□ -1.11
ERCC1-206ENST00000588300 PYY3Q5JQD4 70 aa8.09□□□□□ -1.11
ERCC1-206ENST00000588300 SIGMAR1Q99720 223 aa8.08□□□□□ -1.12
ERCC1-206ENST00000588300 PRO1854Q9UHT4 67 aa8.08□□□□□ -1.12
ERCC1-206ENST00000588300 A0A1B0GX51 115 aa8.07□□□□□ -1.12
ERCC1-206ENST00000588300 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.07□□□□□ -1.12
ERCC1-206ENST00000588300 FABP2P12104 132 aa8.07□□□□□ -1.12
ERCC1-206ENST00000588300 HSD52Q0P140 79 aa8.06□□□□□ -1.12
ERCC1-206ENST00000588300 A0A1W2PNM2 257 aa8.04□□□□□ -1.12
ERCC1-206ENST00000588300 USH2AO75445 5202 aa8.04□□□□□ -1.12
ERCC1-206ENST00000588300 FAM236DA0A1B0GTK5 79 aa8.03□□□□□ -1.12
ERCC1-206ENST00000588300 FAM236CP0DP71 79 aa8.03□□□□□ -1.12
ERCC1-206ENST00000588300 LINC00313P59037 77 aa8.03□□□□□ -1.12
ERCC1-206ENST00000588300 TRIAP1O43715 76 aa8.02□□□□□ -1.13
ERCC1-206ENST00000588300 SSPOA2VEC9 5147 aa8.02□□□□□ -1.13
ERCC1-206ENST00000588300 K7ERJ3 54 aa8.01□□□□□ -1.13
ERCC1-206ENST00000588300 DNAL4O96015 105 aa8.01□□□□□ -1.13
ERCC1-206ENST00000588300 IGKV4-1P06312 121 aa8.01□□□□□ -1.13
ERCC1-206ENST00000588300 PSMB2P49721 201 aa8.01□□□□□ -1.13
ERCC1-206ENST00000588300 UQCR10Q9UDW1 63 aa8.01□□□□□ -1.13
ERCC1-206ENST00000588300 KRTAP16-1A8MUX0 517 aa8□□□□□ -1.13
ERCC1-206ENST00000588300 TRBV7-4A0A0J9YYF1 115 aa7.99□□□□□ -1.13
ERCC1-206ENST00000588300 KRTAP9-7A8MTY7 169 aa7.99□□□□□ -1.13
ERCC1-206ENST00000588300 ANKRD29Q8N6D5 301 aa7.99□□□□□ -1.13
ERCC1-206ENST00000588300 MT2AP02795 61 aa7.98□□□□□ -1.13
ERCC1-206ENST00000588300 RBM12B-AS1Q9P1G2 102 aa7.98□□□□□ -1.13
ERCC1-206ENST00000588300 COX6CP09669 75 aa7.97□□□□□ -1.13
ERCC1-206ENST00000588300 ORMDL1Q9P0S3 153 aa7.96□□□□□ -1.14
ERCC1-206ENST00000588300 A0A1B0GV72 72 aa7.95□□□□□ -1.14
ERCC1-206ENST00000588300 H3BQ85 93 aa7.95□□□□□ -1.14
ERCC1-206ENST00000588300 HRES1P13985 223 aa7.95□□□□□ -1.14
ERCC1-206ENST00000588300 MPLKIPQ8TAP9 179 aa7.95□□□□□ -1.14
ERCC1-206ENST00000588300 NOTCH2NLQ7Z3S9 236 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms