RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 C20orf202A1L168 122 aa7.43□□□□□ -1.22
ERCC1-205ENST00000587888 VAMP3Q15836 100 aa7.42□□□□□ -1.22
ERCC1-205ENST00000587888 LINC00575Q6W349 94 aa7.4□□□□□ -1.22
ERCC1-205ENST00000587888 ATP11AUNQ6ZP68 121 aa7.4□□□□□ -1.22
ERCC1-205ENST00000587888 OBSCN-AS1Q96MR7 158 aa7.4□□□□□ -1.22
ERCC1-205ENST00000587888 TRBV7-7A0A0K0K1E9 115 aa7.38□□□□□ -1.23
ERCC1-205ENST00000587888 hADV29S1A0JD25 119 aa7.38□□□□□ -1.23
ERCC1-205ENST00000587888 Q6JHZ5 121 aa7.38□□□□□ -1.23
ERCC1-205ENST00000587888 IGFL1Q6UW32 110 aa7.38□□□□□ -1.23
ERCC1-205ENST00000587888 Q6ZQY7 126 aa7.38□□□□□ -1.23
ERCC1-205ENST00000587888 OCIAD2Q56VL3 154 aa7.37□□□□□ -1.23
ERCC1-205ENST00000587888 COA6Q5JTJ3 125 aaKnown RBP7.37□□□□□ -1.23
ERCC1-205ENST00000587888 CLEC2BQ92478 149 aa7.36□□□□□ -1.23
ERCC1-205ENST00000587888 Q75L30 129 aa7.34□□□□□ -1.23
ERCC1-205ENST00000587888 Q96NJ1 140 aa7.33□□□□□ -1.24
ERCC1-205ENST00000587888 SNHG12Q9BXW3 62 aa7.32□□□□□ -1.24
ERCC1-205ENST00000587888 FLGP20930 4061 aaPredicted RBP7.32□□□□□ -1.24
ERCC1-205ENST00000587888 LST1O00453 97 aa7.31□□□□□ -1.24
ERCC1-205ENST00000587888 SNRPEP62304 92 aaKnown RBP7.31□□□□□ -1.24
ERCC1-205ENST00000587888 H3BUT2 72 aa7.3□□□□□ -1.24
ERCC1-205ENST00000587888 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.3□□□□□ -1.24
ERCC1-205ENST00000587888 C12orf57Q99622 126 aa7.29□□□□□ -1.24
ERCC1-205ENST00000587888 HSBP1L1C9JCN9 74 aa7.26□□□□□ -1.25
ERCC1-205ENST00000587888 BVES-AS1Q5T3Y7 98 aa7.26□□□□□ -1.25
ERCC1-205ENST00000587888 PPDPFLQ8WWR9 84 aa7.26□□□□□ -1.25
ERCC1-205ENST00000587888 KRTAP9-8Q9BYQ0 159 aa7.24□□□□□ -1.25
ERCC1-205ENST00000587888 TRBV20-1A0A075B6N2 111 aa7.23□□□□□ -1.25
ERCC1-205ENST00000587888 SCGB1D1O95968 90 aa7.23□□□□□ -1.25
ERCC1-205ENST00000587888 HIST1H4GQ99525 98 aa7.23□□□□□ -1.25
ERCC1-205ENST00000587888 CFC1P0CG37 223 aa7.22□□□□□ -1.25
ERCC1-205ENST00000587888 C20orf166-AS1Q96NR2 134 aa7.22□□□□□ -1.25
ERCC1-205ENST00000587888 SS18L2Q9UHA2 77 aa7.22□□□□□ -1.25
ERCC1-205ENST00000587888 A8MUU9 505 aa7.21□□□□□ -1.26
ERCC1-205ENST00000587888 S100A2P29034 98 aa7.21□□□□□ -1.26
ERCC1-205ENST00000587888 HIST1H2BLQ99880 126 aa7.21□□□□□ -1.26
ERCC1-205ENST00000587888 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.2□□□□□ -1.26
ERCC1-205ENST00000587888 HIST3H2BBQ8N257 126 aa7.2□□□□□ -1.26
ERCC1-205ENST00000587888 KRTAP9-7A8MTY7 169 aa7.19□□□□□ -1.26
ERCC1-205ENST00000587888 NDUFV3P56181 108 aaKnown RBP7.19□□□□□ -1.26
ERCC1-205ENST00000587888 TEN1Q86WV5 123 aa7.19□□□□□ -1.26
ERCC1-205ENST00000587888 A0A087WSZ3 146 aa7.18□□□□□ -1.26
ERCC1-205ENST00000587888 SNCGO76070 127 aa7.18□□□□□ -1.26
ERCC1-205ENST00000587888 DSCR10P59022 87 aa7.18□□□□□ -1.26
ERCC1-205ENST00000587888 RAB37Q96AX2 223 aa7.15□□□□□ -1.26
ERCC1-205ENST00000587888 FAM218AQ96MZ4 157 aa7.15□□□□□ -1.26
ERCC1-205ENST00000587888 H0YGX0 51 aa7.14□□□□□ -1.27
ERCC1-205ENST00000587888 H3BMG7 143 aa7.14□□□□□ -1.27
ERCC1-205ENST00000587888 FAM236DA0A1B0GTK5 79 aa7.13□□□□□ -1.27
ERCC1-205ENST00000587888 KRTAP16-1A8MUX0 517 aa7.13□□□□□ -1.27
ERCC1-205ENST00000587888 FAM236CP0DP71 79 aa7.13□□□□□ -1.27
ERCC1-205ENST00000587888 COX8AP10176 69 aa7.13□□□□□ -1.27
ERCC1-205ENST00000587888 FABP2P12104 132 aa7.13□□□□□ -1.27
ERCC1-205ENST00000587888 SIGMAR1Q99720 223 aa7.12□□□□□ -1.27
ERCC1-205ENST00000587888 MT2AP02795 61 aa7.11□□□□□ -1.27
ERCC1-205ENST00000587888 LINC00313P59037 77 aa7.11□□□□□ -1.27
ERCC1-205ENST00000587888 S100A6P06703 90 aa7.1□□□□□ -1.27
ERCC1-205ENST00000587888 A0A1W2PNM2 257 aa7.09□□□□□ -1.27
ERCC1-205ENST00000587888 C14orf144Q96I85 54 aa7.09□□□□□ -1.27
ERCC1-205ENST00000587888 USH2AO75445 5202 aa7.09□□□□□ -1.28
ERCC1-205ENST00000587888 DLEU1O43261 78 aa7.08□□□□□ -1.28
ERCC1-205ENST00000587888 IGKV4-1P06312 121 aa7.08□□□□□ -1.28
ERCC1-205ENST00000587888 A0A0B4J2C4 111 aa7.07□□□□□ -1.28
ERCC1-205ENST00000587888 GHRHP01286 108 aa7.07□□□□□ -1.28
ERCC1-205ENST00000587888 RBM12B-AS1Q9P1G2 102 aa7.07□□□□□ -1.28
ERCC1-205ENST00000587888 MT1FP04733 61 aa7.06□□□□□ -1.28
ERCC1-205ENST00000587888 KRTAP10-10P60014 251 aa7.06□□□□□ -1.28
ERCC1-205ENST00000587888 DEFB116Q30KQ4 102 aa7.06□□□□□ -1.28
ERCC1-205ENST00000587888 A0A1B0GV72 72 aa7.05□□□□□ -1.28
ERCC1-205ENST00000587888 LCE2BO14633 110 aa7.05□□□□□ -1.28
ERCC1-205ENST00000587888 NOTCH2NLQ7Z3S9 236 aa7.05□□□□□ -1.28
ERCC1-205ENST00000587888 TMA7Q9Y2S6 64 aaKnown RBP7.05□□□□□ -1.28
ERCC1-205ENST00000587888 SSPOA2VEC9 5147 aa7.05□□□□□ -1.28
ERCC1-205ENST00000587888 A0A1B0GX51 115 aa7.04□□□□□ -1.28
ERCC1-205ENST00000587888 HRES1P13985 223 aa7.04□□□□□ -1.28
ERCC1-205ENST00000587888 KRTAP19-1Q8IUB9 90 aa7.04□□□□□ -1.28
ERCC1-205ENST00000587888 ANKRD29Q8N6D5 301 aa7.04□□□□□ -1.28
ERCC1-205ENST00000587888 HIGD1BQ9P298 99 aa7.03□□□□□ -1.28
ERCC1-205ENST00000587888 PRO1854Q9UHT4 67 aa7.03□□□□□ -1.28
ERCC1-205ENST00000587888 MPLKIPQ8TAP9 179 aa7.02□□□□□ -1.29
ERCC1-205ENST00000587888 PAM16Q9Y3D7 125 aa7.02□□□□□ -1.29
ERCC1-205ENST00000587888 IGHV6-1A0A0B4J1U7 121 aa7.01□□□□□ -1.29
ERCC1-205ENST00000587888 TRBV7-4A0A0J9YYF1 115 aa7.01□□□□□ -1.29
ERCC1-205ENST00000587888 SPATA45Q537H7 98 aa7.01□□□□□ -1.29
ERCC1-205ENST00000587888 CEND1Q8N111 149 aa7.01□□□□□ -1.29
ERCC1-205ENST00000587888 KRTAP9-3Q9BYQ3 159 aa7.01□□□□□ -1.29
ERCC1-205ENST00000587888 TRIAP1O43715 76 aa7□□□□□ -1.29
ERCC1-205ENST00000587888 C2orf91Q6ZV80 131 aa7□□□□□ -1.29
ERCC1-205ENST00000587888 LINC00472Q9H8W2 130 aa6.98□□□□□ -1.29
ERCC1-205ENST00000587888 ORMDL1Q9P0S3 153 aa6.98□□□□□ -1.29
ERCC1-205ENST00000587888 TMEM238LA0A1B0GVL6 79 aa6.97□□□□□ -1.29
ERCC1-205ENST00000587888 A6NJY4 79 aa6.97□□□□□ -1.29
ERCC1-205ENST00000587888 DNAL4O96015 105 aa6.97□□□□□ -1.29
ERCC1-205ENST00000587888 FCGBPQ9Y6R7 5405 aaPredicted RBP6.97□□□□□ -1.29
ERCC1-205ENST00000587888 TRACP01848 142 aa6.96□□□□□ -1.3
ERCC1-205ENST00000587888 CCKP06307 115 aa6.96□□□□□ -1.3
ERCC1-205ENST00000587888 PSMB2P49721 201 aa6.95□□□□□ -1.3
ERCC1-205ENST00000587888 FXYD2P54710 66 aa6.95□□□□□ -1.3
ERCC1-205ENST00000587888 VAMP8Q9BV40 100 aa6.95□□□□□ -1.3
ERCC1-205ENST00000587888 TMEM256-PLSCR3K7ERE1 68 aa6.94□□□□□ -1.3
ERCC1-205ENST00000587888 H3BQ85 93 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms