RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 ST20-AS1Q8NBB2 130 aa11.53□□□□□ -0.56
RETREG3-205ENST00000586870 PCLOQ9Y6V0 5065 aa11.53□□□□□ -0.56
RETREG3-205ENST00000586870 ATP5EP2Q5VTU8 51 aa11.52□□□□□ -0.57
RETREG3-205ENST00000586870 EPM2AB3EWF7 344 aa11.51□□□□□ -0.57
RETREG3-205ENST00000586870 SPACA4Q8TDM5 124 aa11.51□□□□□ -0.57
RETREG3-205ENST00000586870 H0Y9J4 135 aa11.5□□□□□ -0.57
RETREG3-205ENST00000586870 IGKV3D-7A0A0C4DH55 119 aa11.49□□□□□ -0.57
RETREG3-205ENST00000586870 PANO1I0J062 215 aa11.49□□□□□ -0.57
RETREG3-205ENST00000586870 SMR3BP02814 79 aaPredicted RBP11.49□□□□□ -0.57
RETREG3-205ENST00000586870 SCXQ7RTU7 201 aa11.49□□□□□ -0.57
RETREG3-205ENST00000586870 PRLHP81277 87 aa11.48□□□□□ -0.57
RETREG3-205ENST00000586870 KRTAP11-1Q8IUC1 163 aa11.48□□□□□ -0.57
RETREG3-205ENST00000586870 ANAPC13Q9BS18 74 aa11.48□□□□□ -0.57
RETREG3-205ENST00000586870 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.48□□□□□ -0.57
RETREG3-205ENST00000586870 CIRBP-AS1Q8TBR5 109 aa11.47□□□□□ -0.57
RETREG3-205ENST00000586870 Q8N1X5 172 aa11.46□□□□□ -0.57
RETREG3-205ENST00000586870 FAM229AH3BQW9 127 aa11.45□□□□□ -0.58
RETREG3-205ENST00000586870 Q6ZVQ6 151 aa11.45□□□□□ -0.58
RETREG3-205ENST00000586870 C3orf22Q8N5N4 141 aa11.44□□□□□ -0.58
RETREG3-205ENST00000586870 HIGD2AQ9BW72 106 aa11.44□□□□□ -0.58
RETREG3-205ENST00000586870 KRTAP17-1Q9BYP8 105 aa11.43□□□□□ -0.58
RETREG3-205ENST00000586870 HSPG2P98160 4391 aa11.43□□□□□ -0.58
RETREG3-205ENST00000586870 FAM236AA0A1B0GUQ0 79 aa11.42□□□□□ -0.58
RETREG3-205ENST00000586870 FAM236BA0A1B0GV22 79 aa11.42□□□□□ -0.58
RETREG3-205ENST00000586870 A0A1B0GW54 56 aa11.42□□□□□ -0.58
RETREG3-205ENST00000586870 BCE1O60756 84 aa11.42□□□□□ -0.58
RETREG3-205ENST00000586870 SMIM29Q86T20 159 aa11.42□□□□□ -0.58
RETREG3-205ENST00000586870 APOBP04114 4563 aaKnown RBP11.42□□□□□ -0.58
RETREG3-205ENST00000586870 ABCA13Q86UQ4 5058 aa11.42□□□□□ -0.58
RETREG3-205ENST00000586870 UBE2AP49459 152 aa11.41□□□□□ -0.58
RETREG3-205ENST00000586870 C1orf137Q5JT78 98 aa11.4□□□□□ -0.58
RETREG3-205ENST00000586870 F8WEM9 126 aa11.39□□□□□ -0.59
RETREG3-205ENST00000586870 Q5VSD8 79 aa11.39□□□□□ -0.59
RETREG3-205ENST00000586870 PLAC8Q9NZF1 115 aa11.38□□□□□ -0.59
RETREG3-205ENST00000586870 SPRR1BP22528 89 aa11.38□□□□□ -0.59
RETREG3-205ENST00000586870 HIST1H4AP62805 103 aaKnown RBP11.38□□□□□ -0.59
RETREG3-205ENST00000586870 CXCL6P80162 114 aa11.37□□□□□ -0.59
RETREG3-205ENST00000586870 KRTAP13-1Q8IUC0 172 aa11.37□□□□□ -0.59
RETREG3-205ENST00000586870 PLA2G1BP04054 148 aaKnown RBP11.36□□□□□ -0.59
RETREG3-205ENST00000586870 A0A1W2PNM2 257 aa11.35□□□□□ -0.59
RETREG3-205ENST00000586870 Q8NBF4 154 aa11.35□□□□□ -0.59
RETREG3-205ENST00000586870 DNAH8Q96JB1 4490 aa11.35□□□□□ -0.59
RETREG3-205ENST00000586870 IGLV8-61A0A075B6I0 122 aa11.35□□□□□ -0.59
RETREG3-205ENST00000586870 A0A087WVE0 104 aa11.33□□□□□ -0.6
RETREG3-205ENST00000586870 NREPQ16612 68 aa11.33□□□□□ -0.6
RETREG3-205ENST00000586870 KRTAP4-5Q9BYR2 181 aa11.33□□□□□ -0.6
RETREG3-205ENST00000586870 SPRR4Q96PI1 79 aa11.32□□□□□ -0.6
RETREG3-205ENST00000586870 ATOX1O00244 68 aa11.31□□□□□ -0.6
RETREG3-205ENST00000586870 RPL37AP61513 92 aaKnown RBP11.3□□□□□ -0.6
RETREG3-205ENST00000586870 IGFL1Q6UW32 110 aa11.28□□□□□ -0.6
RETREG3-205ENST00000586870 CRYGAP11844 174 aa11.27□□□□□ -0.61
RETREG3-205ENST00000586870 PSORS1C2Q9UIG4 136 aa11.27□□□□□ -0.61
RETREG3-205ENST00000586870 BPY2O14599 106 aa11.23□□□□□ -0.61
RETREG3-205ENST00000586870 CCDC179H3BU77 68 aa11.22□□□□□ -0.61
RETREG3-205ENST00000586870 ZNF706Q9Y5V0 76 aaPredicted RBP11.22□□□□□ -0.61
RETREG3-205ENST00000586870 ZNF861PO60384 105 aa11.2□□□□□ -0.62
RETREG3-205ENST00000586870 FAT1Q14517 4588 aa11.19□□□□□ -0.62
RETREG3-205ENST00000586870 LINC00483Q53H64 154 aa11.19□□□□□ -0.62
RETREG3-205ENST00000586870 UQCRQO14949 82 aa11.18□□□□□ -0.62
RETREG3-205ENST00000586870 COX7CP15954 63 aa11.18□□□□□ -0.62
RETREG3-205ENST00000586870 A0A0G2JQZ4 141 aa11.17□□□□□ -0.62
RETREG3-205ENST00000586870 SERP2Q8N6R1 65 aa11.17□□□□□ -0.62
RETREG3-205ENST00000586870 IGKV4-1P06312 121 aa11.15□□□□□ -0.62
RETREG3-205ENST00000586870 KRTAP10-4P60372 401 aaPredicted RBP11.14□□□□□ -0.63
RETREG3-205ENST00000586870 IGLV7-43P04211 117 aa11.13□□□□□ -0.63
RETREG3-205ENST00000586870 A0A087WSZ3 146 aa11.12□□□□□ -0.63
RETREG3-205ENST00000586870 SRRM2Q9UQ35 2752 aaKnown RBP11.11□□□□□ -0.63
RETREG3-205ENST00000586870 SMIM20Q8N5G0 67 aa11.11□□□□□ -0.63
RETREG3-205ENST00000586870 VPS13BQ7Z7G8 4022 aa11.1□□□□□ -0.63
RETREG3-205ENST00000586870 Q8N9L7 120 aa11.1□□□□□ -0.63
RETREG3-205ENST00000586870 C9orf153Q5TBE3 101 aa11.09□□□□□ -0.63
RETREG3-205ENST00000586870 IGLV9-49A0A0B4J1Y8 123 aa11.08□□□□□ -0.64
RETREG3-205ENST00000586870 DSCR10P59022 87 aa11.07□□□□□ -0.64
RETREG3-205ENST00000586870 TRAV7A0A075B6U4 112 aa11.06□□□□□ -0.64
RETREG3-205ENST00000586870 SPINK6Q6UWN8 80 aa11.03□□□□□ -0.64
RETREG3-205ENST00000586870 J3QL48 77 aa10.99□□□□□ -0.65
RETREG3-205ENST00000586870 K7EQZ3 153 aa10.99□□□□□ -0.65
RETREG3-205ENST00000586870 MOBPQ13875 183 aa10.99□□□□□ -0.65
RETREG3-205ENST00000586870 LINC00472Q9H8W2 130 aa10.99□□□□□ -0.65
RETREG3-205ENST00000586870 ANAPC11Q9NYG5 84 aa10.98□□□□□ -0.65
RETREG3-205ENST00000586870 OXTP01178 125 aa10.97□□□□□ -0.65
RETREG3-205ENST00000586870 DEFB116Q30KQ4 102 aa10.97□□□□□ -0.65
RETREG3-205ENST00000586870 FLG2Q5D862 2391 aaPredicted RBP10.96□□□□□ -0.65
RETREG3-205ENST00000586870 MYCBP2O75592 4640 aa10.95□□□□□ -0.66
RETREG3-205ENST00000586870 KRTAP29-1A8MX34 341 aaPredicted RBP10.95□□□□□ -0.66
RETREG3-205ENST00000586870 J3KT08 172 aa10.95□□□□□ -0.66
RETREG3-205ENST00000586870 SS18L2Q9UHA2 77 aa10.95□□□□□ -0.66
RETREG3-205ENST00000586870 HERC1Q15751 4861 aa10.92□□□□□ -0.66
RETREG3-205ENST00000586870 A8MWP4 228 aa10.91□□□□□ -0.66
RETREG3-205ENST00000586870 HCG22E2RYF7 251 aa10.91□□□□□ -0.66
RETREG3-205ENST00000586870 SSBP3-AS1Q7Z2R9 100 aa10.91□□□□□ -0.66
RETREG3-205ENST00000586870 OCR1Q9BZK8 76 aa10.91□□□□□ -0.66
RETREG3-205ENST00000586870 HRCT1Q6UXD1 115 aa10.9□□□□□ -0.66
RETREG3-205ENST00000586870 C20orf197Q8N268 126 aa10.9□□□□□ -0.66
RETREG3-205ENST00000586870 PRR15Q8IV56 129 aa10.89□□□□□ -0.67
RETREG3-205ENST00000586870 CD164Q04900 197 aa10.88□□□□□ -0.67
RETREG3-205ENST00000586870 FAM229BQ4G0N7 80 aa10.87□□□□□ -0.67
RETREG3-205ENST00000586870 Q96NJ1 140 aa10.87□□□□□ -0.67
RETREG3-205ENST00000586870 CYSTM1Q9H1C7 97 aa10.86□□□□□ -0.67
RETREG3-205ENST00000586870 DMBT1Q9UGM3 2413 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms