RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 Q6ZVH6 145 aa10.26□□□□□ -0.77
TRAF4-216ENST00000586813 NHP2Q9NX24 153 aaKnown RBP10.26□□□□□ -0.77
TRAF4-216ENST00000586813 TCL1BO95988 128 aa10.25□□□□□ -0.77
TRAF4-216ENST00000586813 MUSTN1Q8IVN3 82 aa10.25□□□□□ -0.77
TRAF4-216ENST00000586813 SMIM11BQ8TCY0 68 aa10.23□□□□□ -0.77
TRAF4-216ENST00000586813 SCGB1D1O95968 90 aa10.22□□□□□ -0.77
TRAF4-216ENST00000586813 TRAV13-2A0A0B4J235 113 aa10.21□□□□□ -0.77
TRAF4-216ENST00000586813 F8WEM9 126 aa10.2□□□□□ -0.78
TRAF4-216ENST00000586813 PCP2Q8IVA1 136 aa10.2□□□□□ -0.78
TRAF4-216ENST00000586813 LINC00575Q6W349 94 aa10.14□□□□□ -0.79
TRAF4-216ENST00000586813 TRBV7-7A0A0K0K1E9 115 aa10.13□□□□□ -0.79
TRAF4-216ENST00000586813 VAMP3Q15836 100 aa10.13□□□□□ -0.79
TRAF4-216ENST00000586813 Q6JHZ5 121 aa10.13□□□□□ -0.79
TRAF4-216ENST00000586813 Q6ZQY7 126 aa10.13□□□□□ -0.79
TRAF4-216ENST00000586813 CLEC2BQ92478 149 aa10.13□□□□□ -0.79
TRAF4-216ENST00000586813 IGFL1Q6UW32 110 aa10.11□□□□□ -0.79
TRAF4-216ENST00000586813 OBSCN-AS1Q96MR7 158 aa10.1□□□□□ -0.79
TRAF4-216ENST00000586813 hADV29S1A0JD25 119 aa10.09□□□□□ -0.79
TRAF4-216ENST00000586813 Q75L30 129 aa10.09□□□□□ -0.79
TRAF4-216ENST00000586813 ATP11AUNQ6ZP68 121 aa10.07□□□□□ -0.8
TRAF4-216ENST00000586813 OCIAD2Q56VL3 154 aa10.06□□□□□ -0.8
TRAF4-216ENST00000586813 Q6Q795 121 aa10.06□□□□□ -0.8
TRAF4-216ENST00000586813 VAMP8Q9BV40 100 aa10.04□□□□□ -0.8
TRAF4-216ENST00000586813 TMA7Q9Y2S6 64 aaKnown RBP10.04□□□□□ -0.8
TRAF4-216ENST00000586813 PAM16Q9Y3D7 125 aa10.04□□□□□ -0.8
TRAF4-216ENST00000586813 COX8AP10176 69 aa10.03□□□□□ -0.8
TRAF4-216ENST00000586813 SPATA45Q537H7 98 aa10.02□□□□□ -0.81
TRAF4-216ENST00000586813 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.02□□□□□ -0.81
TRAF4-216ENST00000586813 HIST1H4GQ99525 98 aa10.02□□□□□ -0.81
TRAF4-216ENST00000586813 PPDPFLQ8WWR9 84 aa10.01□□□□□ -0.81
TRAF4-216ENST00000586813 LST1O00453 97 aa9.99□□□□□ -0.81
TRAF4-216ENST00000586813 C14orf144Q96I85 54 aa9.99□□□□□ -0.81
TRAF4-216ENST00000586813 DLEU1O43261 78 aa9.98□□□□□ -0.81
TRAF4-216ENST00000586813 H3BUT2 72 aa9.97□□□□□ -0.81
TRAF4-216ENST00000586813 BVES-AS1Q5T3Y7 98 aa9.97□□□□□ -0.81
TRAF4-216ENST00000586813 Q96NJ1 140 aa9.97□□□□□ -0.81
TRAF4-216ENST00000586813 SNHG12Q9BXW3 62 aa9.97□□□□□ -0.81
TRAF4-216ENST00000586813 C12orf57Q99622 126 aa9.96□□□□□ -0.82
TRAF4-216ENST00000586813 C20orf166-AS1Q96NR2 134 aa9.93□□□□□ -0.82
TRAF4-216ENST00000586813 SS18L2Q9UHA2 77 aa9.93□□□□□ -0.82
TRAF4-216ENST00000586813 HIGD1BQ9P298 99 aa9.91□□□□□ -0.82
TRAF4-216ENST00000586813 CFC1P0CG37 223 aa9.9□□□□□ -0.82
TRAF4-216ENST00000586813 A8MUU9 505 aa9.89□□□□□ -0.83
TRAF4-216ENST00000586813 RAB37Q96AX2 223 aa9.89□□□□□ -0.83
TRAF4-216ENST00000586813 KRTAP9-8Q9BYQ0 159 aa9.89□□□□□ -0.83
TRAF4-216ENST00000586813 PYY3Q5JQD4 70 aa9.88□□□□□ -0.83
TRAF4-216ENST00000586813 USH2AO75445 5202 aa9.87□□□□□ -0.83
TRAF4-216ENST00000586813 TEN1Q86WV5 123 aa9.86□□□□□ -0.83
TRAF4-216ENST00000586813 TRBV20-1A0A075B6N2 111 aa9.85□□□□□ -0.83
TRAF4-216ENST00000586813 TMEM238LA0A1B0GVL6 79 aa9.85□□□□□ -0.83
TRAF4-216ENST00000586813 A6NJY4 79 aa9.85□□□□□ -0.83
TRAF4-216ENST00000586813 C2orf91Q6ZV80 131 aa9.84□□□□□ -0.83
TRAF4-216ENST00000586813 SSPOA2VEC9 5147 aa9.84□□□□□ -0.83
TRAF4-216ENST00000586813 A0A087WSZ3 146 aa9.83□□□□□ -0.84
TRAF4-216ENST00000586813 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.83□□□□□ -0.84
TRAF4-216ENST00000586813 NDUFV3P56181 108 aaKnown RBP9.83□□□□□ -0.84
TRAF4-216ENST00000586813 CEND1Q8N111 149 aa9.83□□□□□ -0.84
TRAF4-216ENST00000586813 SNCGO76070 127 aa9.81□□□□□ -0.84
TRAF4-216ENST00000586813 FAM218AQ96MZ4 157 aa9.81□□□□□ -0.84
TRAF4-216ENST00000586813 A0A0B4J2C4 111 aa9.8□□□□□ -0.84
TRAF4-216ENST00000586813 DSCR10P59022 87 aa9.8□□□□□ -0.84
TRAF4-216ENST00000586813 KRTAP9-7A8MTY7 169 aa9.79□□□□□ -0.84
TRAF4-216ENST00000586813 H0YGX0 51 aa9.79□□□□□ -0.84
TRAF4-216ENST00000586813 HSD52Q0P140 79 aa9.77□□□□□ -0.85
TRAF4-216ENST00000586813 UQCR10Q9UDW1 63 aa9.77□□□□□ -0.85
TRAF4-216ENST00000586813 H3BMG7 143 aa9.76□□□□□ -0.85
TRAF4-216ENST00000586813 SIGMAR1Q99720 223 aa9.75□□□□□ -0.85
TRAF4-216ENST00000586813 PRO1854Q9UHT4 67 aa9.75□□□□□ -0.85
TRAF4-216ENST00000586813 FXYD2P54710 66 aa9.74□□□□□ -0.85
TRAF4-216ENST00000586813 KRTAP16-1A8MUX0 517 aa9.72□□□□□ -0.85
TRAF4-216ENST00000586813 MT2AP02795 61 aa9.72□□□□□ -0.85
TRAF4-216ENST00000586813 FABP2P12104 132 aa9.72□□□□□ -0.85
TRAF4-216ENST00000586813 FAM236DA0A1B0GTK5 79 aa9.71□□□□□ -0.86
TRAF4-216ENST00000586813 A0A1W2PNM2 257 aa9.71□□□□□ -0.86
TRAF4-216ENST00000586813 GHRHP01286 108 aa9.71□□□□□ -0.86
TRAF4-216ENST00000586813 FAM236CP0DP71 79 aa9.71□□□□□ -0.86
TRAF4-216ENST00000586813 A0A1B0GX51 115 aa9.7□□□□□ -0.86
TRAF4-216ENST00000586813 LINC00313P59037 77 aa9.69□□□□□ -0.86
TRAF4-216ENST00000586813 PSMB2P49721 201 aa9.68□□□□□ -0.86
TRAF4-216ENST00000586813 FCGBPQ9Y6R7 5405 aaPredicted RBP9.67□□□□□ -0.86
TRAF4-216ENST00000586813 IGKV4-1P06312 121 aa9.67□□□□□ -0.86
TRAF4-216ENST00000586813 K7ERJ3 54 aa9.65□□□□□ -0.86
TRAF4-216ENST00000586813 MT1FP04733 61 aa9.65□□□□□ -0.86
TRAF4-216ENST00000586813 HRES1P13985 223 aa9.65□□□□□ -0.86
TRAF4-216ENST00000586813 MPLKIPQ8TAP9 179 aa9.65□□□□□ -0.86
TRAF4-216ENST00000586813 COX6CP09669 75 aa9.64□□□□□ -0.87
TRAF4-216ENST00000586813 SMIM6P0DI80 62 aa9.64□□□□□ -0.87
TRAF4-216ENST00000586813 RBM12B-AS1Q9P1G2 102 aa9.64□□□□□ -0.87
TRAF4-216ENST00000586813 TRBV7-4A0A0J9YYF1 115 aa9.63□□□□□ -0.87
TRAF4-216ENST00000586813 TRIAP1O43715 76 aa9.63□□□□□ -0.87
TRAF4-216ENST00000586813 NOTCH2NLQ7Z3S9 236 aa9.63□□□□□ -0.87
TRAF4-216ENST00000586813 LCE2BO14633 110 aa9.62□□□□□ -0.87
TRAF4-216ENST00000586813 ANKRD29Q8N6D5 301 aa9.62□□□□□ -0.87
TRAF4-216ENST00000586813 DNAL4O96015 105 aa9.61□□□□□ -0.87
TRAF4-216ENST00000586813 A0A1B0GV72 72 aa9.6□□□□□ -0.87
TRAF4-216ENST00000586813 DEFB116Q30KQ4 102 aa9.59□□□□□ -0.87
TRAF4-216ENST00000586813 KRTAP19-1Q8IUB9 90 aa9.59□□□□□ -0.87
TRAF4-216ENST00000586813 KRTAP9-3Q9BYQ3 159 aa9.58□□□□□ -0.88
TRAF4-216ENST00000586813 LINC00472Q9H8W2 130 aa9.58□□□□□ -0.88
TRAF4-216ENST00000586813 M0R143 59 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms