RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 CRYGAP11844 174 aa10.07□□□□□ -0.8
PRKCSH-203ENST00000586486 PPDPFLQ8WWR9 84 aa10.07□□□□□ -0.8
PRKCSH-203ENST00000586486 FABP2P12104 132 aa10.06□□□□□ -0.8
PRKCSH-203ENST00000586486 ATXN8Q156A1 80 aa10.06□□□□□ -0.8
PRKCSH-203ENST00000586486 Q8N377 158 aa10.06□□□□□ -0.8
PRKCSH-203ENST00000586486 DEFB105AQ8NG35 78 aa10.06□□□□□ -0.8
PRKCSH-203ENST00000586486 KRTAP29-1A8MX34 341 aaPredicted RBP10.05□□□□□ -0.8
PRKCSH-203ENST00000586486 GHRHP01286 108 aa10.04□□□□□ -0.8
PRKCSH-203ENST00000586486 PRR26Q8N8Z3 221 aa10.04□□□□□ -0.8
PRKCSH-203ENST00000586486 KRTAP13-2Q52LG2 175 aa10.03□□□□□ -0.8
PRKCSH-203ENST00000586486 SMIM29Q86T20 159 aa10.02□□□□□ -0.81
PRKCSH-203ENST00000586486 ORMDL1Q9P0S3 153 aa10.02□□□□□ -0.81
PRKCSH-203ENST00000586486 H3BQ85 93 aa10.01□□□□□ -0.81
PRKCSH-203ENST00000586486 LAMTOR3Q9UHA4 124 aa10.01□□□□□ -0.81
PRKCSH-203ENST00000586486 KRTAP10-8P60410 259 aa10□□□□□ -0.81
PRKCSH-203ENST00000586486 PCLOQ9Y6V0 5065 aa10□□□□□ -0.81
PRKCSH-203ENST00000586486 MT1HL1P0DM35 61 aa10□□□□□ -0.81
PRKCSH-203ENST00000586486 C3orf22Q8N5N4 141 aa10□□□□□ -0.81
PRKCSH-203ENST00000586486 TYMSOSQ8TAI1 123 aa9.98□□□□□ -0.81
PRKCSH-203ENST00000586486 SPCS1Q9Y6A9 102 aa9.98□□□□□ -0.81
PRKCSH-203ENST00000586486 IGLV9-49A0A0B4J1Y8 123 aa9.97□□□□□ -0.81
PRKCSH-203ENST00000586486 LCE2BO14633 110 aa9.97□□□□□ -0.81
PRKCSH-203ENST00000586486 TMEM256-PLSCR3K7ERE1 68 aa9.96□□□□□ -0.81
PRKCSH-203ENST00000586486 MOBPQ13875 183 aa9.96□□□□□ -0.82
PRKCSH-203ENST00000586486 Q8NBF4 154 aa9.96□□□□□ -0.82
PRKCSH-203ENST00000586486 TNXBP22105 4242 aa9.95□□□□□ -0.82
PRKCSH-203ENST00000586486 F8WEM9 126 aa9.94□□□□□ -0.82
PRKCSH-203ENST00000586486 H3BMG7 143 aa9.94□□□□□ -0.82
PRKCSH-203ENST00000586486 C9orf153Q5TBE3 101 aa9.94□□□□□ -0.82
PRKCSH-203ENST00000586486 SSBP3-AS1Q7Z2R9 100 aa9.94□□□□□ -0.82
PRKCSH-203ENST00000586486 K7EP34 96 aa9.93□□□□□ -0.82
PRKCSH-203ENST00000586486 UBE2V1Q13404 147 aa9.93□□□□□ -0.82
PRKCSH-203ENST00000586486 C9JAW5 83 aa9.93□□□□□ -0.82
PRKCSH-203ENST00000586486 BAALC-AS2P0C853 105 aa9.93□□□□□ -0.82
PRKCSH-203ENST00000586486 NDUFV3P56181 108 aaKnown RBP9.93□□□□□ -0.82
PRKCSH-203ENST00000586486 IGLV8-61A0A075B6I0 122 aa9.92□□□□□ -0.82
PRKCSH-203ENST00000586486 GTF2H5Q6ZYL4 71 aa9.89□□□□□ -0.83
PRKCSH-203ENST00000586486 H3BT86 120 aa9.89□□□□□ -0.83
PRKCSH-203ENST00000586486 Q6JHZ5 121 aa9.88□□□□□ -0.83
PRKCSH-203ENST00000586486 ANKRD29Q8N6D5 301 aa9.87□□□□□ -0.83
PRKCSH-203ENST00000586486 LINC00304Q8N9R0 145 aa9.87□□□□□ -0.83
PRKCSH-203ENST00000586486 DMBT1Q9UGM3 2413 aaPredicted RBP9.86□□□□□ -0.83
PRKCSH-203ENST00000586486 SPAG11AQ6PDA7 123 aa9.85□□□□□ -0.83
PRKCSH-203ENST00000586486 MTURNQ8N3F0 131 aa9.84□□□□□ -0.83
PRKCSH-203ENST00000586486 IGFL1Q6UW32 110 aa9.83□□□□□ -0.84
PRKCSH-203ENST00000586486 PRO0461Q9UI25 63 aa9.82□□□□□ -0.84
PRKCSH-203ENST00000586486 CD164Q04900 197 aa9.82□□□□□ -0.84
PRKCSH-203ENST00000586486 JMJD7-PLA2G4BH0Y9G9 81 aa9.81□□□□□ -0.84
PRKCSH-203ENST00000586486 SPINK1P00995 79 aa9.8□□□□□ -0.84
PRKCSH-203ENST00000586486 A0A0G2JQZ4 141 aa9.79□□□□□ -0.84
PRKCSH-203ENST00000586486 RPS29P62273 56 aaKnown RBP9.79□□□□□ -0.84
PRKCSH-203ENST00000586486 RBM3P98179 157 aaKnown RBP9.79□□□□□ -0.84
PRKCSH-203ENST00000586486 TRBV7-4A0A0J9YYF1 115 aa9.78□□□□□ -0.84
PRKCSH-203ENST00000586486 A0A1B0GV72 72 aa9.78□□□□□ -0.84
PRKCSH-203ENST00000586486 A0A1B0GV90 55 aa9.78□□□□□ -0.84
PRKCSH-203ENST00000586486 OBSCN-AS1Q96MR7 158 aa9.78□□□□□ -0.84
PRKCSH-203ENST00000586486 F8W1H4 67 aa9.76□□□□□ -0.85
PRKCSH-203ENST00000586486 Q6Q795 121 aa9.76□□□□□ -0.85
PRKCSH-203ENST00000586486 DSCR8Q96T75 97 aa9.76□□□□□ -0.85
PRKCSH-203ENST00000586486 HRCT1Q6UXD1 115 aa9.74□□□□□ -0.85
PRKCSH-203ENST00000586486 TEN1Q86WV5 123 aa9.74□□□□□ -0.85
PRKCSH-203ENST00000586486 LOC110117498A0A087WWA1 95 aa9.73□□□□□ -0.85
PRKCSH-203ENST00000586486 A0A1W2PNM2 257 aa9.72□□□□□ -0.85
PRKCSH-203ENST00000586486 TRBV7-7A0A0K0K1E9 115 aa9.71□□□□□ -0.85
PRKCSH-203ENST00000586486 PDE6GP18545 87 aa9.71□□□□□ -0.85
PRKCSH-203ENST00000586486 Q5XG85 94 aa9.71□□□□□ -0.85
PRKCSH-203ENST00000586486 LIMD2Q9BT23 127 aa9.71□□□□□ -0.85
PRKCSH-203ENST00000586486 C14orf132Q9NPU4 83 aa9.71□□□□□ -0.86
PRKCSH-203ENST00000586486 CCKP06307 115 aa9.7□□□□□ -0.86
PRKCSH-203ENST00000586486 Q6ZQT0 140 aa9.7□□□□□ -0.86
PRKCSH-203ENST00000586486 C21orf62-AS1Q17RA5 79 aa9.69□□□□□ -0.86
PRKCSH-203ENST00000586486 VPS25Q9BRG1 176 aa9.64□□□□□ -0.87
PRKCSH-203ENST00000586486 HERC1Q15751 4861 aa9.64□□□□□ -0.87
PRKCSH-203ENST00000586486 A0A087WSZ3 146 aa9.64□□□□□ -0.87
PRKCSH-203ENST00000586486 A0A1B0GW54 56 aa9.64□□□□□ -0.87
PRKCSH-203ENST00000586486 ETDBQ3ZM63 59 aa9.64□□□□□ -0.87
PRKCSH-203ENST00000586486 ASB16-AS1Q495Z4 193 aa9.64□□□□□ -0.87
PRKCSH-203ENST00000586486 SS18L2Q9UHA2 77 aa9.64□□□□□ -0.87
PRKCSH-203ENST00000586486 RETNLBQ9BQ08 111 aa9.6□□□□□ -0.87
PRKCSH-203ENST00000586486 C1orf195Q5TG92 126 aa9.57□□□□□ -0.88
PRKCSH-203ENST00000586486 FP248Q71RG6 208 aaPredicted RBP9.57□□□□□ -0.88
PRKCSH-203ENST00000586486 LCE2CQ5TA81 110 aa9.54□□□□□ -0.88
PRKCSH-203ENST00000586486 PRR4Q16378 134 aa9.53□□□□□ -0.88
PRKCSH-203ENST00000586486 Q96NJ1 140 aa9.52□□□□□ -0.89
PRKCSH-203ENST00000586486 IGLV7-46A0A075B6I9 117 aa9.49□□□□□ -0.89
PRKCSH-203ENST00000586486 LINC00472Q9H8W2 130 aa9.49□□□□□ -0.89
PRKCSH-203ENST00000586486 HMCN2Q8NDA2 5059 aa9.47□□□□□ -0.89
PRKCSH-203ENST00000586486 NREPQ16612 68 aa9.44□□□□□ -0.9
PRKCSH-203ENST00000586486 TPRXLQ17RH7 258 aa9.44□□□□□ -0.9
PRKCSH-203ENST00000586486 FAM240AA0A1B0GVK7 77 aa9.42□□□□□ -0.9
PRKCSH-203ENST00000586486 LINC00846Q9NV44 126 aa9.42□□□□□ -0.9
PRKCSH-203ENST00000586486 J3KT08 172 aa9.42□□□□□ -0.9
PRKCSH-203ENST00000586486 IGKV4-1P06312 121 aa9.42□□□□□ -0.9
PRKCSH-203ENST00000586486 ACYP1P07311 99 aa9.41□□□□□ -0.9
PRKCSH-203ENST00000586486 KRTAP13-3Q3SY46 172 aa9.41□□□□□ -0.9
PRKCSH-203ENST00000586486 Q6ZVQ6 151 aa9.41□□□□□ -0.9
PRKCSH-203ENST00000586486 SIGMAR1Q99720 223 aa9.41□□□□□ -0.9
PRKCSH-203ENST00000586486 DEFB116Q30KQ4 102 aa9.4□□□□□ -0.9
PRKCSH-203ENST00000586486 UBL5Q9BZL1 73 aa9.39□□□□□ -0.91
PRKCSH-203ENST00000586486 LCE2AQ5TA79 106 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms