RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 ANAPC11Q9NYG5 84 aa4.73□□□□□ -1.65
SMAD4-204ENST00000586253 CFC1BP0CG36 223 aa4.72□□□□□ -1.65
SMAD4-204ENST00000586253 CFC1P0CG37 223 aa4.72□□□□□ -1.65
SMAD4-204ENST00000586253 KRTAP13-2Q52LG2 175 aa4.72□□□□□ -1.65
SMAD4-204ENST00000586253 TYMSOSQ8TAI1 123 aa4.72□□□□□ -1.65
SMAD4-204ENST00000586253 C12orf57Q99622 126 aa4.72□□□□□ -1.65
SMAD4-204ENST00000586253 LOC105371267A0A1B0GV96 52 aa4.71□□□□□ -1.66
SMAD4-204ENST00000586253 VAMP3Q15836 100 aa4.71□□□□□ -1.66
SMAD4-204ENST00000586253 RAB37Q96AX2 223 aa4.71□□□□□ -1.66
SMAD4-204ENST00000586253 NHP2Q9NX24 153 aaKnown RBP4.71□□□□□ -1.66
SMAD4-204ENST00000586253 SPRR1BP22528 89 aa4.7□□□□□ -1.66
SMAD4-204ENST00000586253 FXYD2P54710 66 aa4.7□□□□□ -1.66
SMAD4-204ENST00000586253 BVES-AS1Q5T3Y7 98 aa4.7□□□□□ -1.66
SMAD4-204ENST00000586253 HERC1Q15751 4861 aa4.7□□□□□ -1.66
SMAD4-204ENST00000586253 SLC25A20O43772 301 aa4.69□□□□□ -1.66
SMAD4-204ENST00000586253 LINC00575Q6W349 94 aa4.68□□□□□ -1.66
SMAD4-204ENST00000586253 C3orf22Q8N5N4 141 aa4.68□□□□□ -1.66
SMAD4-204ENST00000586253 LINC00304Q8N9R0 145 aa4.68□□□□□ -1.66
SMAD4-204ENST00000586253 ST20-AS1Q8NBB2 130 aa4.68□□□□□ -1.66
SMAD4-204ENST00000586253 PRO1854Q9UHT4 67 aa4.68□□□□□ -1.66
SMAD4-204ENST00000586253 IGLV5-48A0A075B6I7 105 aa4.67□□□□□ -1.66
SMAD4-204ENST00000586253 TEX49A0A1B0GTD5 131 aa4.67□□□□□ -1.66
SMAD4-204ENST00000586253 H7C2G1 150 aa4.67□□□□□ -1.66
SMAD4-204ENST00000586253 SSBP3-AS1Q7Z2R9 100 aa4.67□□□□□ -1.66
SMAD4-204ENST00000586253 PRO1933Q9H354 126 aa4.67□□□□□ -1.66
SMAD4-204ENST00000586253 hADV29S1A0JD25 119 aa4.66□□□□□ -1.66
SMAD4-204ENST00000586253 TSTD3H0UI37 97 aa4.66□□□□□ -1.66
SMAD4-204ENST00000586253 H0YGX0 51 aa4.66□□□□□ -1.66
SMAD4-204ENST00000586253 Q1RN00 199 aa4.66□□□□□ -1.66
SMAD4-204ENST00000586253 SPAG11AQ6PDA7 123 aa4.66□□□□□ -1.66
SMAD4-204ENST00000586253 IGLV9-49A0A0B4J1Y8 123 aa4.65□□□□□ -1.67
SMAD4-204ENST00000586253 LINC01547P58512 204 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-204ENST00000586253 MOBPQ13875 183 aa4.65□□□□□ -1.67
SMAD4-204ENST00000586253 LCE1AQ5T7P2 110 aa4.65□□□□□ -1.67
SMAD4-204ENST00000586253 Q8NBF4 154 aa4.65□□□□□ -1.67
SMAD4-204ENST00000586253 LAMTOR3Q9UHA4 124 aa4.65□□□□□ -1.67
SMAD4-204ENST00000586253 K7ERJ3 54 aa4.64□□□□□ -1.67
SMAD4-204ENST00000586253 M0R143 59 aa4.64□□□□□ -1.67
SMAD4-204ENST00000586253 SNCGO76070 127 aa4.64□□□□□ -1.67
SMAD4-204ENST00000586253 C9orf153Q5TBE3 101 aa4.64□□□□□ -1.67
SMAD4-204ENST00000586253 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.64□□□□□ -1.67
SMAD4-204ENST00000586253 DEFB105AQ8NG35 78 aa4.64□□□□□ -1.67
SMAD4-204ENST00000586253 A0A1B0GX51 115 aa4.63□□□□□ -1.67
SMAD4-204ENST00000586253 SPINK1P00995 79 aa4.63□□□□□ -1.67
SMAD4-204ENST00000586253 RPS29P62273 56 aaKnown RBP4.63□□□□□ -1.67
SMAD4-204ENST00000586253 Q6ZQY7 126 aa4.63□□□□□ -1.67
SMAD4-204ENST00000586253 SMIM29Q86T20 159 aa4.63□□□□□ -1.67
SMAD4-204ENST00000586253 Q8N377 158 aa4.63□□□□□ -1.67
SMAD4-204ENST00000586253 PPDPFLQ8WWR9 84 aa4.63□□□□□ -1.67
SMAD4-204ENST00000586253 TSPAN13O95857 204 aa4.62□□□□□ -1.67
SMAD4-204ENST00000586253 OCIAD2Q56VL3 154 aa4.62□□□□□ -1.67
SMAD4-204ENST00000586253 COX6CP09669 75 aa4.61□□□□□ -1.67
SMAD4-204ENST00000586253 FAM218AQ96MZ4 157 aa4.61□□□□□ -1.67
SMAD4-204ENST00000586253 PSMB2P49721 201 aa4.6□□□□□ -1.67
SMAD4-204ENST00000586253 F8WEM9 126 aa4.59□□□□□ -1.67
SMAD4-204ENST00000586253 CD164Q04900 197 aa4.59□□□□□ -1.67
SMAD4-204ENST00000586253 IGLV8-61A0A075B6I0 122 aa4.58□□□□□ -1.68
SMAD4-204ENST00000586253 H3BQ85 93 aa4.58□□□□□ -1.68
SMAD4-204ENST00000586253 DNAL4O96015 105 aa4.57□□□□□ -1.68
SMAD4-204ENST00000586253 PRR4Q16378 134 aa4.57□□□□□ -1.68
SMAD4-204ENST00000586253 Q6JHZ5 121 aa4.57□□□□□ -1.68
SMAD4-204ENST00000586253 CLEC2BQ92478 149 aa4.57□□□□□ -1.68
SMAD4-204ENST00000586253 SNHG12Q9BXW3 62 aa4.57□□□□□ -1.68
SMAD4-204ENST00000586253 HMCN2Q8NDA2 5059 aa4.57□□□□□ -1.68
SMAD4-204ENST00000586253 TRACP01848 142 aa4.56□□□□□ -1.68
SMAD4-204ENST00000586253 SCGB1C2P0DMR2 95 aa4.56□□□□□ -1.68
SMAD4-204ENST00000586253 FP248Q71RG6 208 aaPredicted RBP4.56□□□□□ -1.68
SMAD4-204ENST00000586253 LIMD2Q9BT23 127 aa4.56□□□□□ -1.68
SMAD4-204ENST00000586253 LST1O00453 97 aa4.55□□□□□ -1.68
SMAD4-204ENST00000586253 Q5XG85 94 aa4.55□□□□□ -1.68
SMAD4-204ENST00000586253 ORMDL1Q9P0S3 153 aa4.55□□□□□ -1.68
SMAD4-204ENST00000586253 TMEM256-PLSCR3K7ERE1 68 aa4.54□□□□□ -1.68
SMAD4-204ENST00000586253 NDUFV3P56181 108 aaKnown RBP4.54□□□□□ -1.68
SMAD4-204ENST00000586253 BATFQ16520 125 aa4.54□□□□□ -1.68
SMAD4-204ENST00000586253 LYRM7Q5U5X0 104 aa4.54□□□□□ -1.68
SMAD4-204ENST00000586253 RETNLBQ9BQ08 111 aa4.54□□□□□ -1.68
SMAD4-204ENST00000586253 IGLV7-46A0A075B6I9 117 aa4.53□□□□□ -1.68
SMAD4-204ENST00000586253 FABP2P12104 132 aa4.53□□□□□ -1.68
SMAD4-204ENST00000586253 IGFL1Q6UW32 110 aa4.53□□□□□ -1.68
SMAD4-204ENST00000586253 HRCT1Q6UXD1 115 aa4.53□□□□□ -1.68
SMAD4-204ENST00000586253 ATXN8Q156A1 80 aa4.52□□□□□ -1.69
SMAD4-204ENST00000586253 TPRXLQ17RH7 258 aa4.52□□□□□ -1.69
SMAD4-204ENST00000586253 TRBV20-1A0A075B6N2 111 aa4.51□□□□□ -1.69
SMAD4-204ENST00000586253 A0A0G2JQZ4 141 aa4.51□□□□□ -1.69
SMAD4-204ENST00000586253 H3BMG7 143 aa4.51□□□□□ -1.69
SMAD4-204ENST00000586253 H3BUT2 72 aa4.51□□□□□ -1.69
SMAD4-204ENST00000586253 Q6Q795 121 aa4.51□□□□□ -1.69
SMAD4-204ENST00000586253 TRBV7-7A0A0K0K1E9 115 aa4.5□□□□□ -1.69
SMAD4-204ENST00000586253 TCL1BO95988 128 aa4.5□□□□□ -1.69
SMAD4-204ENST00000586253 LRP2P98164 4655 aa4.5□□□□□ -1.69
SMAD4-204ENST00000586253 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.5□□□□□ -1.69
SMAD4-204ENST00000586253 NAA38Q9BRA0 125 aaKnown RBP4.5□□□□□ -1.69
SMAD4-204ENST00000586253 LPAP08519 4548 aa4.49□□□□□ -1.69
SMAD4-204ENST00000586253 TAX1BP3O14907 124 aa4.49□□□□□ -1.69
SMAD4-204ENST00000586253 ASB16-AS1Q495Z4 193 aa4.49□□□□□ -1.69
SMAD4-204ENST00000586253 TEN1Q86WV5 123 aa4.49□□□□□ -1.69
SMAD4-204ENST00000586253 PCP4L1A6NKN8 68 aa4.48□□□□□ -1.69
SMAD4-204ENST00000586253 BAALC-AS2P0C853 105 aa4.48□□□□□ -1.69
SMAD4-204ENST00000586253 A0A1W2PPM0 123 aa4.47□□□□□ -1.69
SMAD4-204ENST00000586253 KRTAP13-3Q3SY46 172 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms