RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ETDBQ3ZM63 59 aa7.78□□□□□ -1.16
VMP1-202ENST00000585847 KRTAP13-1Q8IUC0 172 aa7.78□□□□□ -1.16
VMP1-202ENST00000585847 Q9BRP9 147 aa7.78□□□□□ -1.16
VMP1-202ENST00000585847 FLG2Q5D862 2391 aaPredicted RBP7.77□□□□□ -1.17
VMP1-202ENST00000585847 TEX49A0A1B0GTD5 131 aa7.76□□□□□ -1.17
VMP1-202ENST00000585847 ZNF861PO60384 105 aa7.76□□□□□ -1.17
VMP1-202ENST00000585847 SMCR5Q8TEV8 140 aa7.76□□□□□ -1.17
VMP1-202ENST00000585847 OBSCN-AS1Q96MR7 158 aa7.76□□□□□ -1.17
VMP1-202ENST00000585847 PSORS1C2Q9UIG4 136 aa7.76□□□□□ -1.17
VMP1-202ENST00000585847 SPRR1BP22528 89 aa7.75□□□□□ -1.17
VMP1-202ENST00000585847 MTURNQ8N3F0 131 aa7.75□□□□□ -1.17
VMP1-202ENST00000585847 PRLHP81277 87 aa7.74□□□□□ -1.17
VMP1-202ENST00000585847 C1orf137Q5JT78 98 aa7.74□□□□□ -1.17
VMP1-202ENST00000585847 HIGD2AQ9BW72 106 aa7.74□□□□□ -1.17
VMP1-202ENST00000585847 FAM240AA0A1B0GVK7 77 aa7.73□□□□□ -1.17
VMP1-202ENST00000585847 IGLV7-43P04211 117 aa7.73□□□□□ -1.17
VMP1-202ENST00000585847 RPL37AP61513 92 aaKnown RBP7.73□□□□□ -1.17
VMP1-202ENST00000585847 C4orf48Q5BLP8 95 aa7.73□□□□□ -1.17
VMP1-202ENST00000585847 LAMTOR3Q9UHA4 124 aa7.73□□□□□ -1.17
VMP1-202ENST00000585847 F8WEM9 126 aa7.72□□□□□ -1.17
VMP1-202ENST00000585847 ACYP1P07311 99 aa7.72□□□□□ -1.17
VMP1-202ENST00000585847 NDUFV3P56181 108 aaKnown RBP7.72□□□□□ -1.17
VMP1-202ENST00000585847 RBM3P98179 157 aaKnown RBP7.72□□□□□ -1.17
VMP1-202ENST00000585847 A0A1B0GW54 56 aa7.71□□□□□ -1.18
VMP1-202ENST00000585847 PLA2G1BP04054 148 aaKnown RBP7.71□□□□□ -1.18
VMP1-202ENST00000585847 DSCR8Q96T75 97 aa7.71□□□□□ -1.18
VMP1-202ENST00000585847 LOC110117498A0A087WWA1 95 aa7.7□□□□□ -1.18
VMP1-202ENST00000585847 LINC01547P58512 204 aaPredicted RBP7.69□□□□□ -1.18
VMP1-202ENST00000585847 Q8N377 158 aa7.69□□□□□ -1.18
VMP1-202ENST00000585847 LINC00483Q53H64 154 aa7.68□□□□□ -1.18
VMP1-202ENST00000585847 IGLV8-61A0A075B6I0 122 aa7.67□□□□□ -1.18
VMP1-202ENST00000585847 ERC2-IT1O76042 136 aa7.67□□□□□ -1.18
VMP1-202ENST00000585847 Q6JHZ5 121 aa7.67□□□□□ -1.18
VMP1-202ENST00000585847 SPRR4Q96PI1 79 aa7.66□□□□□ -1.18
VMP1-202ENST00000585847 TRBV7-4A0A0J9YYF1 115 aa7.65□□□□□ -1.18
VMP1-202ENST00000585847 KRTAP29-1A8MX34 341 aaPredicted RBP7.65□□□□□ -1.18
VMP1-202ENST00000585847 DEFB105AQ8NG35 78 aa7.65□□□□□ -1.18
VMP1-202ENST00000585847 ST20-AS1Q8NBB2 130 aa7.64□□□□□ -1.19
VMP1-202ENST00000585847 CCKP06307 115 aa7.63□□□□□ -1.19
VMP1-202ENST00000585847 FAM229BQ4G0N7 80 aa7.63□□□□□ -1.19
VMP1-202ENST00000585847 GAGE2AQ6NT46 116 aa7.62□□□□□ -1.19
VMP1-202ENST00000585847 SPINK6Q6UWN8 80 aa7.62□□□□□ -1.19
VMP1-202ENST00000585847 C14orf132Q9NPU4 83 aa7.62□□□□□ -1.19
VMP1-202ENST00000585847 UBR4Q5T4S7 5183 aa7.61□□□□□ -1.19
VMP1-202ENST00000585847 FAT3Q8TDW7 4589 aa7.61□□□□□ -1.19
VMP1-202ENST00000585847 Q6ZQT0 140 aa7.61□□□□□ -1.19
VMP1-202ENST00000585847 SMIM29Q86T20 159 aa7.61□□□□□ -1.19
VMP1-202ENST00000585847 LCE2AQ5TA79 106 aaPredicted RBP7.58□□□□□ -1.2
VMP1-202ENST00000585847 Q6Q795 121 aa7.58□□□□□ -1.2
VMP1-202ENST00000585847 Q8NBF4 154 aa7.58□□□□□ -1.2
VMP1-202ENST00000585847 HMCN2Q8NDA2 5059 aa7.58□□□□□ -1.2
VMP1-202ENST00000585847 LRP1Q07954 4544 aaKnown RBP7.57□□□□□ -1.2
VMP1-202ENST00000585847 OXTP01178 125 aa7.56□□□□□ -1.2
VMP1-202ENST00000585847 ATP5EP2Q5VTU8 51 aa7.55□□□□□ -1.2
VMP1-202ENST00000585847 SSBP3-AS1Q7Z2R9 100 aa7.55□□□□□ -1.2
VMP1-202ENST00000585847 UBL5Q9BZL1 73 aa7.55□□□□□ -1.2
VMP1-202ENST00000585847 CRYGAP11844 174 aa7.54□□□□□ -1.2
VMP1-202ENST00000585847 KRTAP1-4P0C5Y4 121 aa7.53□□□□□ -1.2
VMP1-202ENST00000585847 C3orf22Q8N5N4 141 aa7.53□□□□□ -1.2
VMP1-202ENST00000585847 TNXBP22105 4242 aa7.53□□□□□ -1.2
VMP1-202ENST00000585847 CD164Q04900 197 aa7.52□□□□□ -1.21
VMP1-202ENST00000585847 LCE2CQ5TA81 110 aa7.52□□□□□ -1.21
VMP1-202ENST00000585847 C9orf153Q5TBE3 101 aa7.52□□□□□ -1.21
VMP1-202ENST00000585847 LINC00643Q86TS7 51 aa7.52□□□□□ -1.21
VMP1-202ENST00000585847 IGFL1Q6UW32 110 aa7.51□□□□□ -1.21
VMP1-202ENST00000585847 VPS25Q9BRG1 176 aa7.51□□□□□ -1.21
VMP1-202ENST00000585847 SS18L2Q9UHA2 77 aa7.51□□□□□ -1.21
VMP1-202ENST00000585847 TRBV7-7A0A0K0K1E9 115 aa7.5□□□□□ -1.21
VMP1-202ENST00000585847 A0A1B0GV72 72 aa7.5□□□□□ -1.21
VMP1-202ENST00000585847 IGLV9-49A0A0B4J1Y8 123 aa7.48□□□□□ -1.21
VMP1-202ENST00000585847 MT1HL1P0DM35 61 aa7.48□□□□□ -1.21
VMP1-202ENST00000585847 A0A1W2PNM2 257 aa7.47□□□□□ -1.21
VMP1-202ENST00000585847 MOBPQ13875 183 aa7.47□□□□□ -1.21
VMP1-202ENST00000585847 CDIP1Q9H305 208 aa7.47□□□□□ -1.21
VMP1-202ENST00000585847 LINC00846Q9NV44 126 aa7.47□□□□□ -1.21
VMP1-202ENST00000585847 ANAPC11Q9NYG5 84 aa7.46□□□□□ -1.22
VMP1-202ENST00000585847 KRTAP10-8P60410 259 aa7.45□□□□□ -1.22
VMP1-202ENST00000585847 IMUPQ9GZP8 106 aa7.45□□□□□ -1.22
VMP1-202ENST00000585847 A0A087X002 238 aa7.44□□□□□ -1.22
VMP1-202ENST00000585847 CXCL6P80162 114 aa7.44□□□□□ -1.22
VMP1-202ENST00000585847 NREPQ16612 68 aa7.44□□□□□ -1.22
VMP1-202ENST00000585847 RPS29P62273 56 aaKnown RBP7.43□□□□□ -1.22
VMP1-202ENST00000585847 SPAG11AQ6PDA7 123 aa7.43□□□□□ -1.22
VMP1-202ENST00000585847 Q6ZVQ6 151 aa7.43□□□□□ -1.22
VMP1-202ENST00000585847 PRR26Q8N8Z3 221 aa7.43□□□□□ -1.22
VMP1-202ENST00000585847 J3KT08 172 aa7.42□□□□□ -1.22
VMP1-202ENST00000585847 Q5XG85 94 aa7.42□□□□□ -1.22
VMP1-202ENST00000585847 SIGMAR1Q99720 223 aa7.42□□□□□ -1.22
VMP1-202ENST00000585847 KRTAP13-2Q52LG2 175 aa7.41□□□□□ -1.22
VMP1-202ENST00000585847 LIMD2Q9BT23 127 aa7.41□□□□□ -1.22
VMP1-202ENST00000585847 A0A087WSZ3 146 aa7.4□□□□□ -1.22
VMP1-202ENST00000585847 ASB16-AS1Q495Z4 193 aa7.4□□□□□ -1.22
VMP1-202ENST00000585847 TYMSOSQ8TAI1 123 aa7.4□□□□□ -1.22
VMP1-202ENST00000585847 RNF213Q63HN8 5207 aa7.38□□□□□ -1.23
VMP1-202ENST00000585847 SPINK1P00995 79 aa7.38□□□□□ -1.23
VMP1-202ENST00000585847 BPY2O14599 106 aa7.37□□□□□ -1.23
VMP1-202ENST00000585847 SCGB1A1P11684 91 aa7.35□□□□□ -1.23
VMP1-202ENST00000585847 LINC00304Q8N9R0 145 aa7.33□□□□□ -1.24
VMP1-202ENST00000585847 MT-ATP8P03928 68 aa7.32□□□□□ -1.24
VMP1-202ENST00000585847 LORP23490 312 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 155.1 ms