RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	LINC00575	Q6W349	94 aa		8.56	□□□□□ -1.04
PRKAR1A-206	ENST00000585460		F8WEM9	126 aa		8.55	□□□□□ -1.04
PRKAR1A-206	ENST00000585460	VAMP3	Q15836	100 aa		8.54	□□□□□ -1.04
PRKAR1A-206	ENST00000585460	TRBV7-7	A0A0K0K1E9	115 aa		8.52	□□□□□ -1.05
PRKAR1A-206	ENST00000585460	OCIAD2	Q56VL3	154 aa		8.52	□□□□□ -1.05
PRKAR1A-206	ENST00000585460		Q6JHZ5	121 aa		8.52	□□□□□ -1.05
PRKAR1A-206	ENST00000585460	IGFL1	Q6UW32	110 aa		8.52	□□□□□ -1.05
PRKAR1A-206	ENST00000585460		Q6ZQY7	126 aa		8.52	□□□□□ -1.05
PRKAR1A-206	ENST00000585460	hADV29S1	A0JD25	119 aa		8.51	□□□□□ -1.05
PRKAR1A-206	ENST00000585460	OBSCN-AS1	Q96MR7	158 aa		8.51	□□□□□ -1.05
PRKAR1A-206	ENST00000585460		Q6Q795	121 aa		8.5	□□□□□ -1.05
PRKAR1A-206	ENST00000585460	ATP11AUN	Q6ZP68	121 aa		8.5	□□□□□ -1.05
PRKAR1A-206	ENST00000585460		Q75L30	129 aa		8.49	□□□□□ -1.05
PRKAR1A-206	ENST00000585460	CLEC2B	Q92478	149 aa		8.49	□□□□□ -1.05
PRKAR1A-206	ENST00000585460	SNRPE	P62304	92 aa	Known RBP	8.47	□□□□□ -1.05
PRKAR1A-206	ENST00000585460	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	8.44	□□□□□ -1.06
PRKAR1A-206	ENST00000585460	LST1	O00453	97 aa		8.42	□□□□□ -1.06
PRKAR1A-206	ENST00000585460		Q96NJ1	140 aa		8.42	□□□□□ -1.06
PRKAR1A-206	ENST00000585460	SNHG12	Q9BXW3	62 aa		8.42	□□□□□ -1.06
PRKAR1A-206	ENST00000585460		H3BUT2	72 aa		8.41	□□□□□ -1.06
PRKAR1A-206	ENST00000585460	PPDPFL	Q8WWR9	84 aa		8.4	□□□□□ -1.06
PRKAR1A-206	ENST00000585460	KRTAP9-8	Q9BYQ0	159 aa		8.4	□□□□□ -1.06
PRKAR1A-206	ENST00000585460	BVES-AS1	Q5T3Y7	98 aa		8.37	□□□□□ -1.07
PRKAR1A-206	ENST00000585460	C20orf166-AS1	Q96NR2	134 aa		8.37	□□□□□ -1.07
PRKAR1A-206	ENST00000585460	C12orf57	Q99622	126 aa		8.37	□□□□□ -1.07
PRKAR1A-206	ENST00000585460	USH2A	O75445	5202 aa		8.37	□□□□□ -1.07
PRKAR1A-206	ENST00000585460	HSBP1L1	C9JCN9	74 aa		8.36	□□□□□ -1.07
PRKAR1A-206	ENST00000585460	HIST1H2BL	Q99880	126 aa		8.36	□□□□□ -1.07
PRKAR1A-206	ENST00000585460		A8MUU9	505 aa		8.35	□□□□□ -1.07
PRKAR1A-206	ENST00000585460	SCGB1D1	O95968	90 aa		8.35	□□□□□ -1.07
PRKAR1A-206	ENST00000585460	S100A1	P23297	94 aa		8.35	□□□□□ -1.07
PRKAR1A-206	ENST00000585460	HIST3H2BB	Q8N257	126 aa		8.35	□□□□□ -1.07
PRKAR1A-206	ENST00000585460	SSPO	A2VEC9	5147 aa		8.34	□□□□□ -1.07
PRKAR1A-206	ENST00000585460	CFC1	P0CG37	223 aa		8.33	□□□□□ -1.08
PRKAR1A-206	ENST00000585460	HIST1H4G	Q99525	98 aa		8.32	□□□□□ -1.08
PRKAR1A-206	ENST00000585460	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	8.31	□□□□□ -1.08
PRKAR1A-206	ENST00000585460	TEN1	Q86WV5	123 aa		8.31	□□□□□ -1.08
PRKAR1A-206	ENST00000585460	SS18L2	Q9UHA2	77 aa		8.31	□□□□□ -1.08
PRKAR1A-206	ENST00000585460	S100A2	P29034	98 aa		8.3	□□□□□ -1.08
PRKAR1A-206	ENST00000585460	TRBV20-1	A0A075B6N2	111 aa		8.29	□□□□□ -1.08
PRKAR1A-206	ENST00000585460	NDUFV3	P56181	108 aa	Known RBP	8.29	□□□□□ -1.08
PRKAR1A-206	ENST00000585460	KRTAP9-7	A8MTY7	169 aa		8.28	□□□□□ -1.08
PRKAR1A-206	ENST00000585460		A0A087WSZ3	146 aa		8.27	□□□□□ -1.09
PRKAR1A-206	ENST00000585460	FAM218A	Q96MZ4	157 aa		8.27	□□□□□ -1.09
PRKAR1A-206	ENST00000585460	KRTAP16-1	A8MUX0	517 aa		8.26	□□□□□ -1.09
PRKAR1A-206	ENST00000585460	COX8A	P10176	69 aa		8.26	□□□□□ -1.09
PRKAR1A-206	ENST00000585460	DSCR10	P59022	87 aa		8.26	□□□□□ -1.09
PRKAR1A-206	ENST00000585460		H0YGX0	51 aa		8.25	□□□□□ -1.09
PRKAR1A-206	ENST00000585460		H3BMG7	143 aa		8.24	□□□□□ -1.09
PRKAR1A-206	ENST00000585460	SNCG	O76070	127 aa		8.24	□□□□□ -1.09
PRKAR1A-206	ENST00000585460	DLEU1	O43261	78 aa		8.23	□□□□□ -1.09
PRKAR1A-206	ENST00000585460	MT2A	P02795	61 aa		8.22	□□□□□ -1.09
PRKAR1A-206	ENST00000585460	RAB37	Q96AX2	223 aa		8.22	□□□□□ -1.09
PRKAR1A-206	ENST00000585460		A0A1W2PNM2	257 aa		8.21	□□□□□ -1.1
PRKAR1A-206	ENST00000585460	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	8.19	□□□□□ -1.1
PRKAR1A-206	ENST00000585460	FABP2	P12104	132 aa		8.19	□□□□□ -1.1
PRKAR1A-206	ENST00000585460	LINC00313	P59037	77 aa		8.19	□□□□□ -1.1
PRKAR1A-206	ENST00000585460	C14orf144	Q96I85	54 aa		8.19	□□□□□ -1.1
PRKAR1A-206	ENST00000585460		A0A0B4J2C4	111 aa		8.18	□□□□□ -1.1
PRKAR1A-206	ENST00000585460	S100A6	P06703	90 aa		8.18	□□□□□ -1.1
PRKAR1A-206	ENST00000585460		A0A1B0GX51	115 aa		8.16	□□□□□ -1.1
PRKAR1A-206	ENST00000585460	LCE2B	O14633	110 aa		8.16	□□□□□ -1.1
PRKAR1A-206	ENST00000585460	MT1F	P04733	61 aa		8.16	□□□□□ -1.1
PRKAR1A-206	ENST00000585460	NOTCH2NL	Q7Z3S9	236 aa		8.16	□□□□□ -1.1
PRKAR1A-206	ENST00000585460	MPLKIP	Q8TAP9	179 aa		8.16	□□□□□ -1.1
PRKAR1A-206	ENST00000585460	SIGMAR1	Q99720	223 aa		8.16	□□□□□ -1.1
PRKAR1A-206	ENST00000585460	HIGD1B	Q9P298	99 aa		8.16	□□□□□ -1.1
PRKAR1A-206	ENST00000585460	FAM236D	A0A1B0GTK5	79 aa		8.15	□□□□□ -1.1
PRKAR1A-206	ENST00000585460	GHRH	P01286	108 aa		8.15	□□□□□ -1.1
PRKAR1A-206	ENST00000585460	IGKV4-1	P06312	121 aa		8.15	□□□□□ -1.1
PRKAR1A-206	ENST00000585460	FAM236C	P0DP71	79 aa		8.15	□□□□□ -1.1
PRKAR1A-206	ENST00000585460	HRES1	P13985	223 aa		8.15	□□□□□ -1.1
PRKAR1A-206	ENST00000585460	KRTAP9-3	Q9BYQ3	159 aa		8.14	□□□□□ -1.11
PRKAR1A-206	ENST00000585460	C2orf91	Q6ZV80	131 aa		8.12	□□□□□ -1.11
PRKAR1A-206	ENST00000585460	KRTAP19-1	Q8IUB9	90 aa		8.12	□□□□□ -1.11
PRKAR1A-206	ENST00000585460	ANKRD29	Q8N6D5	301 aa		8.12	□□□□□ -1.11
PRKAR1A-206	ENST00000585460	PRO1854	Q9UHT4	67 aa		8.12	□□□□□ -1.11
PRKAR1A-206	ENST00000585460	TRBV7-4	A0A0J9YYF1	115 aa		8.11	□□□□□ -1.11
PRKAR1A-206	ENST00000585460	KRTAP10-10	P60014	251 aa		8.11	□□□□□ -1.11
PRKAR1A-206	ENST00000585460	DEFB116	Q30KQ4	102 aa		8.11	□□□□□ -1.11
PRKAR1A-206	ENST00000585460	RBM12B-AS1	Q9P1G2	102 aa		8.11	□□□□□ -1.11
PRKAR1A-206	ENST00000585460	CEND1	Q8N111	149 aa		8.1	□□□□□ -1.11
PRKAR1A-206	ENST00000585460	LINC00472	Q9H8W2	130 aa		8.1	□□□□□ -1.11
PRKAR1A-206	ENST00000585460	SPATA45	Q537H7	98 aa		8.09	□□□□□ -1.11
PRKAR1A-206	ENST00000585460	PAM16	Q9Y3D7	125 aa		8.09	□□□□□ -1.11
PRKAR1A-206	ENST00000585460	TRIAP1	O43715	76 aa		8.08	□□□□□ -1.12
PRKAR1A-206	ENST00000585460		A0A1B0GV72	72 aa		8.06	□□□□□ -1.12
PRKAR1A-206	ENST00000585460	IGHV6-1	A0A0B4J1U7	121 aa		8.05	□□□□□ -1.12
PRKAR1A-206	ENST00000585460	FXYD2	P54710	66 aa		8.05	□□□□□ -1.12
PRKAR1A-206	ENST00000585460	ORMDL1	Q9P0S3	153 aa		8.04	□□□□□ -1.12
PRKAR1A-206	ENST00000585460	TMEM238L	A0A1B0GVL6	79 aa		8.03	□□□□□ -1.12
PRKAR1A-206	ENST00000585460		A6NJY4	79 aa		8.03	□□□□□ -1.12
PRKAR1A-206	ENST00000585460		H3BQ85	93 aa		8.02	□□□□□ -1.13
PRKAR1A-206	ENST00000585460	CCK	P06307	115 aa		8.02	□□□□□ -1.13
PRKAR1A-206	ENST00000585460	VAMP8	Q9BV40	100 aa		8.02	□□□□□ -1.13
PRKAR1A-206	ENST00000585460	TMEM256-PLSCR3	K7ERE1	68 aa		8.01	□□□□□ -1.13
PRKAR1A-206	ENST00000585460	DNAL4	O96015	105 aa		8	□□□□□ -1.13
PRKAR1A-206	ENST00000585460	TRAC	P01848	142 aa		8	□□□□□ -1.13
PRKAR1A-206	ENST00000585460	PSMB2	P49721	201 aa		7.97	□□□□□ -1.13
PRKAR1A-206	ENST00000585460		A0A1B0GVX0	72 aa		7.96	□□□□□ -1.14

Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms