RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 PANO1I0J062 215 aa6.47□□□□□ -1.37
LIG3-203ENST00000585370 BCE1O60756 84 aa6.47□□□□□ -1.37
LIG3-203ENST00000585370 Q8N377 158 aa6.47□□□□□ -1.37
LIG3-203ENST00000585370 UBE2AP49459 152 aa6.46□□□□□ -1.38
LIG3-203ENST00000585370 SMCR5Q8TEV8 140 aa6.46□□□□□ -1.38
LIG3-203ENST00000585370 FLG2Q5D862 2391 aaPredicted RBP6.45□□□□□ -1.38
LIG3-203ENST00000585370 LINC01547P58512 204 aaPredicted RBP6.45□□□□□ -1.38
LIG3-203ENST00000585370 KRTAP10-1P60331 282 aa6.45□□□□□ -1.38
LIG3-203ENST00000585370 Q6ZQT0 140 aa6.45□□□□□ -1.38
LIG3-203ENST00000585370 DEFB105AQ8NG35 78 aa6.45□□□□□ -1.38
LIG3-203ENST00000585370 TRBV7-4A0A0J9YYF1 115 aa6.44□□□□□ -1.38
LIG3-203ENST00000585370 A0A1B0GW54 56 aa6.43□□□□□ -1.38
LIG3-203ENST00000585370 ERC2-IT1O76042 136 aa6.43□□□□□ -1.38
LIG3-203ENST00000585370 LINC00643Q86TS7 51 aa6.43□□□□□ -1.38
LIG3-203ENST00000585370 HIGD2AQ9BW72 106 aa6.43□□□□□ -1.38
LIG3-203ENST00000585370 PRLHP81277 87 aa6.42□□□□□ -1.38
LIG3-203ENST00000585370 KRTAP11-1Q8IUC1 163 aa6.42□□□□□ -1.38
LIG3-203ENST00000585370 F8WEM9 126 aa6.41□□□□□ -1.38
LIG3-203ENST00000585370 SCGB1A1P11684 91 aa6.41□□□□□ -1.38
LIG3-203ENST00000585370 SPRR1BP22528 89 aa6.41□□□□□ -1.38
LIG3-203ENST00000585370 Q5VSD8 79 aa6.41□□□□□ -1.38
LIG3-203ENST00000585370 KRTAP13-1Q8IUC0 172 aa6.41□□□□□ -1.38
LIG3-203ENST00000585370 ST20-AS1Q8NBB2 130 aa6.41□□□□□ -1.38
LIG3-203ENST00000585370 A0A1B0GV72 72 aa6.4□□□□□ -1.38
LIG3-203ENST00000585370 SMR3BP02814 79 aaPredicted RBP6.4□□□□□ -1.38
LIG3-203ENST00000585370 Q6ZSA8 131 aa6.4□□□□□ -1.38
LIG3-203ENST00000585370 Q6Q795 121 aa6.39□□□□□ -1.39
LIG3-203ENST00000585370 UBL5Q9BZL1 73 aa6.39□□□□□ -1.39
LIG3-203ENST00000585370 IMUPQ9GZP8 106 aa6.39□□□□□ -1.39
LIG3-203ENST00000585370 PSORS1C2Q9UIG4 136 aa6.39□□□□□ -1.39
LIG3-203ENST00000585370 ZNF706Q9Y5V0 76 aaPredicted RBP6.39□□□□□ -1.39
LIG3-203ENST00000585370 IGLV8-61A0A075B6I0 122 aa6.38□□□□□ -1.39
LIG3-203ENST00000585370 MT-ATP8P03928 68 aa6.38□□□□□ -1.39
LIG3-203ENST00000585370 HAMPP81172 84 aa6.38□□□□□ -1.39
LIG3-203ENST00000585370 LINC00846Q9NV44 126 aa6.38□□□□□ -1.39
LIG3-203ENST00000585370 ZNF861PO60384 105 aa6.37□□□□□ -1.39
LIG3-203ENST00000585370 C1orf137Q5JT78 98 aa6.37□□□□□ -1.39
LIG3-203ENST00000585370 SMIM29Q86T20 159 aa6.37□□□□□ -1.39
LIG3-203ENST00000585370 CIRBP-AS1Q8TBR5 109 aa6.37□□□□□ -1.39
LIG3-203ENST00000585370 ATP5EP2Q5VTU8 51 aa6.36□□□□□ -1.39
LIG3-203ENST00000585370 Q6JHZ5 121 aa6.36□□□□□ -1.39
LIG3-203ENST00000585370 TRBV7-7A0A0K0K1E9 115 aa6.35□□□□□ -1.39
LIG3-203ENST00000585370 FAM30AQ9NZY2 134 aa6.35□□□□□ -1.39
LIG3-203ENST00000585370 LRP1Q07954 4544 aaKnown RBP6.35□□□□□ -1.39
LIG3-203ENST00000585370 FAM229AH3BQW9 127 aa6.34□□□□□ -1.39
LIG3-203ENST00000585370 IGLV7-43P04211 117 aa6.34□□□□□ -1.39
LIG3-203ENST00000585370 RPL37AP61513 92 aaKnown RBP6.34□□□□□ -1.39
LIG3-203ENST00000585370 SCXQ7RTU7 201 aa6.34□□□□□ -1.39
LIG3-203ENST00000585370 LINC00483Q53H64 154 aa6.33□□□□□ -1.4
LIG3-203ENST00000585370 C3orf22Q8N5N4 141 aa6.33□□□□□ -1.4
LIG3-203ENST00000585370 SPRR4Q96PI1 79 aa6.33□□□□□ -1.4
LIG3-203ENST00000585370 Q8NBF4 154 aa6.32□□□□□ -1.4
LIG3-203ENST00000585370 Q6ZVQ6 151 aa6.31□□□□□ -1.4
LIG3-203ENST00000585370 A0A1W2PNM2 257 aa6.3□□□□□ -1.4
LIG3-203ENST00000585370 CRYGAP11844 174 aa6.3□□□□□ -1.4
LIG3-203ENST00000585370 NREPQ16612 68 aa6.3□□□□□ -1.4
LIG3-203ENST00000585370 FAT3Q8TDW7 4589 aa6.3□□□□□ -1.4
LIG3-203ENST00000585370 CXCL6P80162 114 aa6.29□□□□□ -1.4
LIG3-203ENST00000585370 IGFL1Q6UW32 110 aa6.29□□□□□ -1.4
LIG3-203ENST00000585370 IGKV3D-7A0A0C4DH55 119 aa6.27□□□□□ -1.41
LIG3-203ENST00000585370 J3QL48 77 aa6.27□□□□□ -1.41
LIG3-203ENST00000585370 PCP4P48539 62 aa6.26□□□□□ -1.41
LIG3-203ENST00000585370 HMCN2Q8NDA2 5059 aa6.26□□□□□ -1.41
LIG3-203ENST00000585370 KRTAP29-1A8MX34 341 aaPredicted RBP6.25□□□□□ -1.41
LIG3-203ENST00000585370 PLA2G1BP04054 148 aaKnown RBP6.25□□□□□ -1.41
LIG3-203ENST00000585370 BPY2O14599 106 aa6.23□□□□□ -1.41
LIG3-203ENST00000585370 C9orf153Q5TBE3 101 aa6.23□□□□□ -1.41
LIG3-203ENST00000585370 UBR4Q5T4S7 5183 aa6.23□□□□□ -1.41
LIG3-203ENST00000585370 PKHD1L1Q86WI1 4243 aa6.22□□□□□ -1.41
LIG3-203ENST00000585370 KRTAP10-4P60372 401 aaPredicted RBP6.22□□□□□ -1.41
LIG3-203ENST00000585370 FAM229BQ4G0N7 80 aa6.22□□□□□ -1.41
LIG3-203ENST00000585370 SSBP3-AS1Q7Z2R9 100 aa6.22□□□□□ -1.41
LIG3-203ENST00000585370 IGLV9-49A0A0B4J1Y8 123 aa6.21□□□□□ -1.42
LIG3-203ENST00000585370 HIST1H4AP62805 103 aaKnown RBP6.21□□□□□ -1.42
LIG3-203ENST00000585370 A0A087WSZ3 146 aa6.19□□□□□ -1.42
LIG3-203ENST00000585370 FAM236AA0A1B0GUQ0 79 aa6.19□□□□□ -1.42
LIG3-203ENST00000585370 FAM236BA0A1B0GV22 79 aa6.19□□□□□ -1.42
LIG3-203ENST00000585370 CD164Q04900 197 aa6.19□□□□□ -1.42
LIG3-203ENST00000585370 SPINK6Q6UWN8 80 aa6.19□□□□□ -1.42
LIG3-203ENST00000585370 SS18L2Q9UHA2 77 aa6.19□□□□□ -1.42
LIG3-203ENST00000585370 LCE2BO14633 110 aa6.18□□□□□ -1.42
LIG3-203ENST00000585370 MOBPQ13875 183 aa6.18□□□□□ -1.42
LIG3-203ENST00000585370 ANAPC13Q9BS18 74 aa6.18□□□□□ -1.42
LIG3-203ENST00000585370 A0A0G2JQZ4 141 aa6.17□□□□□ -1.42
LIG3-203ENST00000585370 J3KT08 172 aa6.17□□□□□ -1.42
LIG3-203ENST00000585370 ATOX1O00244 68 aa6.17□□□□□ -1.42
LIG3-203ENST00000585370 ANAPC11Q9NYG5 84 aa6.16□□□□□ -1.42
LIG3-203ENST00000585370 OXTP01178 125 aa6.15□□□□□ -1.42
LIG3-203ENST00000585370 A0A087WVE0 104 aa6.14□□□□□ -1.43
LIG3-203ENST00000585370 SMIM20Q8N5G0 67 aa6.14□□□□□ -1.43
LIG3-203ENST00000585370 IGKV4-1P06312 121 aa6.13□□□□□ -1.43
LIG3-203ENST00000585370 LINC00472Q9H8W2 130 aa6.13□□□□□ -1.43
LIG3-203ENST00000585370 DSCR10P59022 87 aa6.12□□□□□ -1.43
LIG3-203ENST00000585370 TNXBP22105 4242 aa6.11□□□□□ -1.43
LIG3-203ENST00000585370 KRTAP1-4P0C5Y4 121 aa6.11□□□□□ -1.43
LIG3-203ENST00000585370 NDUFB1O75438 58 aa6.1□□□□□ -1.43
LIG3-203ENST00000585370 ASB16-AS1Q495Z4 193 aa6.1□□□□□ -1.43
LIG3-203ENST00000585370 A8MWP4 228 aa6.09□□□□□ -1.43
LIG3-203ENST00000585370 Q5XG85 94 aa6.09□□□□□ -1.43
LIG3-203ENST00000585370 HRCT1Q6UXD1 115 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 191.6 ms