RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 Q5XG85 94 aa9.8□□□□□ -0.84
SRSF1-208ENST00000584773 PCOTHQ58A44 107 aa9.78□□□□□ -0.84
SRSF1-208ENST00000584773 C14orf144Q96I85 54 aa9.78□□□□□ -0.84
SRSF1-208ENST00000584773 F8WEM9 126 aa9.76□□□□□ -0.85
SRSF1-208ENST00000584773 PAM16Q9Y3D7 125 aa9.76□□□□□ -0.85
SRSF1-208ENST00000584773 DLEU1O43261 78 aa9.74□□□□□ -0.85
SRSF1-208ENST00000584773 CFC1BP0CG36 223 aa9.73□□□□□ -0.85
SRSF1-208ENST00000584773 CFC1P0CG37 223 aa9.73□□□□□ -0.85
SRSF1-208ENST00000584773 SPATA45Q537H7 98 aa9.73□□□□□ -0.85
SRSF1-208ENST00000584773 IGFL1Q6UW32 110 aa9.73□□□□□ -0.85
SRSF1-208ENST00000584773 IGLV8-61A0A075B6I0 122 aa9.72□□□□□ -0.85
SRSF1-208ENST00000584773 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.71□□□□□ -0.86
SRSF1-208ENST00000584773 C2orf91Q6ZV80 131 aa9.71□□□□□ -0.86
SRSF1-208ENST00000584773 BVES-AS1Q5T3Y7 98 aa9.7□□□□□ -0.86
SRSF1-208ENST00000584773 LCE2CQ5TA81 110 aa9.7□□□□□ -0.86
SRSF1-208ENST00000584773 VAMP8Q9BV40 100 aa9.7□□□□□ -0.86
SRSF1-208ENST00000584773 TCL1BO95988 128 aa9.69□□□□□ -0.86
SRSF1-208ENST00000584773 KRTAP19-2Q3LHN2 52 aa9.69□□□□□ -0.86
SRSF1-208ENST00000584773 OCIAD2Q56VL3 154 aa9.69□□□□□ -0.86
SRSF1-208ENST00000584773 CLEC2BQ92478 149 aa9.69□□□□□ -0.86
SRSF1-208ENST00000584773 H3BUT2 72 aa9.68□□□□□ -0.86
SRSF1-208ENST00000584773 RAB37Q96AX2 223 aa9.68□□□□□ -0.86
SRSF1-208ENST00000584773 TRBV7-7A0A0K0K1E9 115 aa9.67□□□□□ -0.86
SRSF1-208ENST00000584773 Q6JHZ5 121 aa9.67□□□□□ -0.86
SRSF1-208ENST00000584773 FAM218AQ96MZ4 157 aa9.67□□□□□ -0.86
SRSF1-208ENST00000584773 HIGD1BQ9P298 99 aa9.67□□□□□ -0.86
SRSF1-208ENST00000584773 A0A0B4J2C4 111 aa9.64□□□□□ -0.87
SRSF1-208ENST00000584773 TSTD3H0UI37 97 aa9.64□□□□□ -0.87
SRSF1-208ENST00000584773 RPL37P61927 97 aaKnown RBP9.64□□□□□ -0.87
SRSF1-208ENST00000584773 SNHG12Q9BXW3 62 aa9.64□□□□□ -0.87
SRSF1-208ENST00000584773 CEND1Q8N111 149 aa9.61□□□□□ -0.87
SRSF1-208ENST00000584773 PPDPFLQ8WWR9 84 aa9.61□□□□□ -0.87
SRSF1-208ENST00000584773 FXYD2P54710 66 aa9.6□□□□□ -0.87
SRSF1-208ENST00000584773 H0YGX0 51 aa9.57□□□□□ -0.88
SRSF1-208ENST00000584773 MT1HP80294 61 aa9.56□□□□□ -0.88
SRSF1-208ENST00000584773 UQCR10Q9UDW1 63 aa9.56□□□□□ -0.88
SRSF1-208ENST00000584773 PCP4L1A6NKN8 68 aa9.56□□□□□ -0.88
SRSF1-208ENST00000584773 PRO1854Q9UHT4 67 aa9.56□□□□□ -0.88
SRSF1-208ENST00000584773 NDUFV3P56181 108 aaKnown RBP9.55□□□□□ -0.88
SRSF1-208ENST00000584773 OBSCN-AS1Q96MR7 158 aa9.55□□□□□ -0.88
SRSF1-208ENST00000584773 TRIAP1O43715 76 aa9.54□□□□□ -0.88
SRSF1-208ENST00000584773 LST1O00453 97 aa9.53□□□□□ -0.88
SRSF1-208ENST00000584773 TMEM238LA0A1B0GVL6 79 aa9.52□□□□□ -0.89
SRSF1-208ENST00000584773 A6NJY4 79 aa9.52□□□□□ -0.89
SRSF1-208ENST00000584773 K7ERJ3 54 aa9.51□□□□□ -0.89
SRSF1-208ENST00000584773 SNCGO76070 127 aa9.51□□□□□ -0.89
SRSF1-208ENST00000584773 FABP2P12104 132 aa9.5□□□□□ -0.89
SRSF1-208ENST00000584773 Q6Q795 121 aa9.49□□□□□ -0.89
SRSF1-208ENST00000584773 A0A087WSZ3 146 aa9.48□□□□□ -0.89
SRSF1-208ENST00000584773 H3BMG7 143 aa9.48□□□□□ -0.89
SRSF1-208ENST00000584773 TEN1Q86WV5 123 aa9.48□□□□□ -0.89
SRSF1-208ENST00000584773 FLGP20930 4061 aaPredicted RBP9.47□□□□□ -0.89
SRSF1-208ENST00000584773 KRTAP9-6A0A140TA67 174 aa9.47□□□□□ -0.89
SRSF1-208ENST00000584773 A0A1B0GV72 72 aa9.47□□□□□ -0.89
SRSF1-208ENST00000584773 A0A1B0GX51 115 aa9.47□□□□□ -0.89
SRSF1-208ENST00000584773 HSD52Q0P140 79 aa9.47□□□□□ -0.89
SRSF1-208ENST00000584773 Q75L30 129 aa9.45□□□□□ -0.9
SRSF1-208ENST00000584773 SS18L2Q9UHA2 77 aa9.45□□□□□ -0.9
SRSF1-208ENST00000584773 A0A1W2PNM2 257 aa9.44□□□□□ -0.9
SRSF1-208ENST00000584773 Q96NJ1 140 aa9.44□□□□□ -0.9
SRSF1-208ENST00000584773 LCE2DQ5TA82 110 aaPredicted RBP9.43□□□□□ -0.9
SRSF1-208ENST00000584773 PSMB2P49721 201 aa9.42□□□□□ -0.9
SRSF1-208ENST00000584773 COX6B2Q6YFQ2 88 aa9.41□□□□□ -0.9
SRSF1-208ENST00000584773 ATP11AUNQ6ZP68 121 aa9.4□□□□□ -0.9
SRSF1-208ENST00000584773 M0R143 59 aa9.38□□□□□ -0.91
SRSF1-208ENST00000584773 DNAL4O96015 105 aa9.38□□□□□ -0.91
SRSF1-208ENST00000584773 KRTAP10-6P60371 365 aaPredicted RBP9.38□□□□□ -0.91
SRSF1-208ENST00000584773 ORMDL1Q9P0S3 153 aa9.38□□□□□ -0.91
SRSF1-208ENST00000584773 GHRHP01286 108 aa9.37□□□□□ -0.91
SRSF1-208ENST00000584773 LORP23490 312 aaPredicted RBP9.37□□□□□ -0.91
SRSF1-208ENST00000584773 DSCR10P59022 87 aa9.37□□□□□ -0.91
SRSF1-208ENST00000584773 M0R2T5 61 aa9.35□□□□□ -0.91
SRSF1-208ENST00000584773 ANKRD29Q8N6D5 301 aa9.35□□□□□ -0.91
SRSF1-208ENST00000584773 C20orf166-AS1Q96NR2 134 aa9.35□□□□□ -0.91
SRSF1-208ENST00000584773 SIGMAR1Q99720 223 aa9.35□□□□□ -0.91
SRSF1-208ENST00000584773 A8MUU9 505 aa9.33□□□□□ -0.92
SRSF1-208ENST00000584773 FSIP2Q5CZC0 6907 aa9.33□□□□□ -0.92
SRSF1-208ENST00000584773 COX6CP09669 75 aa9.32□□□□□ -0.92
SRSF1-208ENST00000584773 TRBV7-4A0A0J9YYF1 115 aa9.31□□□□□ -0.92
SRSF1-208ENST00000584773 TMEM256-PLSCR3K7ERE1 68 aa9.31□□□□□ -0.92
SRSF1-208ENST00000584773 DEFB116Q30KQ4 102 aa9.31□□□□□ -0.92
SRSF1-208ENST00000584773 IGKV4-1P06312 121 aa9.3□□□□□ -0.92
SRSF1-208ENST00000584773 H3BQ85 93 aa9.28□□□□□ -0.92
SRSF1-208ENST00000584773 CCKP06307 115 aa9.28□□□□□ -0.92
SRSF1-208ENST00000584773 BATFQ16520 125 aa9.28□□□□□ -0.92
SRSF1-208ENST00000584773 COL5A1-AS1Q5SY13 56 aa9.28□□□□□ -0.92
SRSF1-208ENST00000584773 NOTCH2NLQ7Z3S9 236 aa9.28□□□□□ -0.92
SRSF1-208ENST00000584773 SCGB1C2P0DMR2 95 aa9.27□□□□□ -0.93
SRSF1-208ENST00000584773 KRTAP16-1A8MUX0 517 aa9.26□□□□□ -0.93
SRSF1-208ENST00000584773 TRACP01848 142 aa9.26□□□□□ -0.93
SRSF1-208ENST00000584773 UBE2V1Q13404 147 aa9.26□□□□□ -0.93
SRSF1-208ENST00000584773 LINC00472Q9H8W2 130 aa9.25□□□□□ -0.93
SRSF1-208ENST00000584773 LINC00313P59037 77 aa9.24□□□□□ -0.93
SRSF1-208ENST00000584773 VPS25Q9BRG1 176 aa9.24□□□□□ -0.93
SRSF1-208ENST00000584773 CRCT1Q9UGL9 99 aa9.23□□□□□ -0.93
SRSF1-208ENST00000584773 NAA38Q9BRA0 125 aaKnown RBP9.21□□□□□ -0.94
SRSF1-208ENST00000584773 IGHV6-1A0A0B4J1U7 121 aa9.19□□□□□ -0.94
SRSF1-208ENST00000584773 RBM3P98179 157 aaKnown RBP9.18□□□□□ -0.94
SRSF1-208ENST00000584773 TAX1BP3O14907 124 aa9.17□□□□□ -0.94
SRSF1-208ENST00000584773 BAALC-AS2P0C853 105 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms