RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 C14orf177Q52M58 125 aa6.45□□□□□ -1.38
RFFL-212ENST00000584655 Q6ZQT0 140 aa6.45□□□□□ -1.38
RFFL-212ENST00000584655 KCNQ1DNQ9H478 68 aa6.44□□□□□ -1.38
RFFL-212ENST00000584655 OXTP01178 125 aa6.44□□□□□ -1.38
RFFL-212ENST00000584655 DNAH3Q8TD57 4116 aa6.43□□□□□ -1.38
RFFL-212ENST00000584655 CIRBP-AS1Q8TBR5 109 aa6.43□□□□□ -1.38
RFFL-212ENST00000584655 LINC01600Q96MT4 127 aa6.43□□□□□ -1.38
RFFL-212ENST00000584655 LINC00474Q9P2X8 69 aa6.43□□□□□ -1.38
RFFL-212ENST00000584655 PDE6GP18545 87 aa6.43□□□□□ -1.38
RFFL-212ENST00000584655 LINC00476Q8WZB0 136 aa6.43□□□□□ -1.38
RFFL-212ENST00000584655 H0Y9J4 135 aa6.42□□□□□ -1.38
RFFL-212ENST00000584655 PSORS1C2Q9UIG4 136 aa6.42□□□□□ -1.38
RFFL-212ENST00000584655 MOBPQ13875 183 aa6.41□□□□□ -1.38
RFFL-212ENST00000584655 ATP5EP2Q5VTU8 51 aa6.41□□□□□ -1.38
RFFL-212ENST00000584655 H3BQ85 93 aa6.41□□□□□ -1.38
RFFL-212ENST00000584655 DHRS4-AS1Q9P1J3 65 aa6.41□□□□□ -1.38
RFFL-212ENST00000584655 DNAH11Q96DT5 4516 aa6.4□□□□□ -1.38
RFFL-212ENST00000584655 TRAV7A0A075B6U4 112 aa6.4□□□□□ -1.38
RFFL-212ENST00000584655 RETNLBQ9BQ08 111 aa6.4□□□□□ -1.39
RFFL-212ENST00000584655 Q6ZRN7 208 aaPredicted RBP6.39□□□□□ -1.39
RFFL-212ENST00000584655 A0A1W2PNM2 257 aa6.39□□□□□ -1.39
RFFL-212ENST00000584655 PRYO14603 147 aa6.39□□□□□ -1.39
RFFL-212ENST00000584655 DNAH1Q9P2D7 4330 aa6.39□□□□□ -1.39
RFFL-212ENST00000584655 HYDINQ4G0P3 5121 aa6.38□□□□□ -1.39
RFFL-212ENST00000584655 FRAS1Q86XX4 4008 aa6.38□□□□□ -1.39
RFFL-212ENST00000584655 VPS13DQ5THJ4 4388 aa6.37□□□□□ -1.39
RFFL-212ENST00000584655 NDUFS5O43920 106 aa6.37□□□□□ -1.39
RFFL-212ENST00000584655 TMEM254Q8TBM7 123 aa6.37□□□□□ -1.39
RFFL-212ENST00000584655 DNAH6Q9C0G6 4158 aa6.36□□□□□ -1.39
RFFL-212ENST00000584655 OBSCN-AS1Q96MR7 158 aa6.36□□□□□ -1.39
RFFL-212ENST00000584655 CNBPP62633 177 aaKnown RBP6.36□□□□□ -1.39
RFFL-212ENST00000584655 IGFL1Q6UW32 110 aa6.36□□□□□ -1.39
RFFL-212ENST00000584655 KRTAP10-1P60331 282 aa6.35□□□□□ -1.39
RFFL-212ENST00000584655 LINC00336Q6ZUF6 198 aa6.35□□□□□ -1.39
RFFL-212ENST00000584655 TRBV7-6A0A0J9YX20 115 aa6.35□□□□□ -1.39
RFFL-212ENST00000584655 H7BZZ5 65 aa6.35□□□□□ -1.39
RFFL-212ENST00000584655 TLX1NBP0CAT3 122 aa6.35□□□□□ -1.39
RFFL-212ENST00000584655 F8WDY8 70 aa6.34□□□□□ -1.39
RFFL-212ENST00000584655 LOC110117498A0A087WWA1 95 aa6.34□□□□□ -1.39
RFFL-212ENST00000584655 SMIM29Q86T20 159 aa6.34□□□□□ -1.39
RFFL-212ENST00000584655 PSPHP1O15172 72 aa6.33□□□□□ -1.4
RFFL-212ENST00000584655 K7EQZ3 153 aa6.33□□□□□ -1.4
RFFL-212ENST00000584655 DNAH2Q9P225 4427 aa6.32□□□□□ -1.4
RFFL-212ENST00000584655 SERP1Q9Y6X1 66 aa6.32□□□□□ -1.4
RFFL-212ENST00000584655 RPS28P62857 69 aaKnown RBP6.32□□□□□ -1.4
RFFL-212ENST00000584655 TRBV7-4A0A0J9YYF1 115 aa6.31□□□□□ -1.4
RFFL-212ENST00000584655 KRTAP4-16G5E9R7 235 aaPredicted RBP6.31□□□□□ -1.4
RFFL-212ENST00000584655 SPACA4Q8TDM5 124 aa6.31□□□□□ -1.4
RFFL-212ENST00000584655 BCE1O60756 84 aa6.3□□□□□ -1.4
RFFL-212ENST00000584655 Q6ZR54 194 aa6.3□□□□□ -1.4
RFFL-212ENST00000584655 IGHV6-1A0A0B4J1U7 121 aa6.3□□□□□ -1.4
RFFL-212ENST00000584655 SMIM26A0A096LP01 95 aa6.29□□□□□ -1.4
RFFL-212ENST00000584655 IGKV4-1P06312 121 aa6.29□□□□□ -1.4
RFFL-212ENST00000584655 Q5XG85 94 aa6.29□□□□□ -1.4
RFFL-212ENST00000584655 FAT1Q14517 4588 aa6.28□□□□□ -1.4
RFFL-212ENST00000584655 Q8NBF4 154 aa6.28□□□□□ -1.4
RFFL-212ENST00000584655 KMT2CQ8NEZ4 4911 aaKnown RBP6.28□□□□□ -1.4
RFFL-212ENST00000584655 CXCL6P80162 114 aa6.27□□□□□ -1.41
RFFL-212ENST00000584655 PKHD1P08F94 4074 aa6.27□□□□□ -1.41
RFFL-212ENST00000584655 DNAH8Q96JB1 4490 aa6.27□□□□□ -1.41
RFFL-212ENST00000584655 LCE6AA0A183 80 aa6.27□□□□□ -1.41
RFFL-212ENST00000584655 SPRR1AP35321 89 aa6.27□□□□□ -1.41
RFFL-212ENST00000584655 FAM229BQ4G0N7 80 aa6.26□□□□□ -1.41
RFFL-212ENST00000584655 CDK2AP2O75956 126 aa6.25□□□□□ -1.41
RFFL-212ENST00000584655 LINC00208Q96KT6 92 aa6.25□□□□□ -1.41
RFFL-212ENST00000584655 SPTSSBQ8NFR3 76 aa6.23□□□□□ -1.41
RFFL-212ENST00000584655 KLKP1Q107X0 134 aa6.23□□□□□ -1.41
RFFL-212ENST00000584655 PLA2G2DQ9UNK4 145 aa6.23□□□□□ -1.41
RFFL-212ENST00000584655 LRP1BQ9NZR2 4599 aa6.22□□□□□ -1.41
RFFL-212ENST00000584655 FP248Q71RG6 208 aaPredicted RBP6.22□□□□□ -1.41
RFFL-212ENST00000584655 ZNF861PO60384 105 aa6.22□□□□□ -1.41
RFFL-212ENST00000584655 IGLV5-37A0A075B6J1 123 aa6.22□□□□□ -1.41
RFFL-212ENST00000584655 A0A087X002 238 aa6.21□□□□□ -1.42
RFFL-212ENST00000584655 NDUFC1O43677 76 aa6.21□□□□□ -1.42
RFFL-212ENST00000584655 PLA2G1BP04054 148 aaKnown RBP6.21□□□□□ -1.42
RFFL-212ENST00000584655 SPRR4Q96PI1 79 aa6.21□□□□□ -1.42
RFFL-212ENST00000584655 IGLV7-43P04211 117 aa6.21□□□□□ -1.42
RFFL-212ENST00000584655 MP68P56378 58 aa6.21□□□□□ -1.42
RFFL-212ENST00000584655 IGLV5-48A0A075B6I7 105 aa6.2□□□□□ -1.42
RFFL-212ENST00000584655 PCOTHQ58A44 107 aa6.2□□□□□ -1.42
RFFL-212ENST00000584655 PRO0628Q9UI54 55 aa6.2□□□□□ -1.42
RFFL-212ENST00000584655 DNAH17Q9UFH2 4485 aa6.19□□□□□ -1.42
RFFL-212ENST00000584655 DSCR10P59022 87 aa6.19□□□□□ -1.42
RFFL-212ENST00000584655 C1orf195Q5TG92 126 aa6.19□□□□□ -1.42
RFFL-212ENST00000584655 PRR26Q8N8Z3 221 aa6.19□□□□□ -1.42
RFFL-212ENST00000584655 NDUFB1O75438 58 aa6.17□□□□□ -1.42
RFFL-212ENST00000584655 NOTCH2NLQ7Z3S9 236 aa6.17□□□□□ -1.42
RFFL-212ENST00000584655 C4orf48Q5BLP8 95 aa6.16□□□□□ -1.42
RFFL-212ENST00000584655 DNAH5Q8TE73 4624 aa6.16□□□□□ -1.42
RFFL-212ENST00000584655 CASC2Q6XLA1 102 aa6.15□□□□□ -1.42
RFFL-212ENST00000584655 PLAC8Q9NZF1 115 aa6.15□□□□□ -1.43
RFFL-212ENST00000584655 HECTD4Q9Y4D8 3996 aa6.15□□□□□ -1.43
RFFL-212ENST00000584655 HCG22E2RYF7 251 aa6.15□□□□□ -1.43
RFFL-212ENST00000584655 C1orf64Q8NEQ6 169 aa6.15□□□□□ -1.43
RFFL-212ENST00000584655 OCR1Q9BZK8 76 aa6.14□□□□□ -1.43
RFFL-212ENST00000584655 CHKB-CPT1BH3BT56 60 aa6.13□□□□□ -1.43
RFFL-212ENST00000584655 C9orf92A6NGG3 77 aa6.13□□□□□ -1.43
RFFL-212ENST00000584655 A8MUN3 132 aa6.13□□□□□ -1.43
RFFL-212ENST00000584655 DYNC2H1Q8NCM8 4307 aaKnown RBP6.11□□□□□ -1.43
RFFL-212ENST00000584655 ATP5EP56381 51 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms