RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 OXTP01178 125 aa10.88□□□□□ -0.67
RFFL-211ENST00000584541 PRR26Q8N8Z3 221 aa10.87□□□□□ -0.67
RFFL-211ENST00000584541 A0A087X002 238 aa10.86□□□□□ -0.67
RFFL-211ENST00000584541 IGLV9-49A0A0B4J1Y8 123 aa10.85□□□□□ -0.67
RFFL-211ENST00000584541 F8WEM9 126 aa10.85□□□□□ -0.67
RFFL-211ENST00000584541 TMEM256-PLSCR3K7ERE1 68 aa10.85□□□□□ -0.67
RFFL-211ENST00000584541 C9orf153Q5TBE3 101 aa10.84□□□□□ -0.67
RFFL-211ENST00000584541 TYMSOSQ8TAI1 123 aa10.84□□□□□ -0.67
RFFL-211ENST00000584541 H3BMG7 143 aa10.83□□□□□ -0.68
RFFL-211ENST00000584541 SMIM29Q86T20 159 aa10.83□□□□□ -0.68
RFFL-211ENST00000584541 C3orf22Q8N5N4 141 aa10.83□□□□□ -0.68
RFFL-211ENST00000584541 FLG2Q5D862 2391 aaPredicted RBP10.83□□□□□ -0.68
RFFL-211ENST00000584541 KRTAP29-1A8MX34 341 aaPredicted RBP10.82□□□□□ -0.68
RFFL-211ENST00000584541 C9JAW5 83 aa10.82□□□□□ -0.68
RFFL-211ENST00000584541 K7EP34 96 aa10.82□□□□□ -0.68
RFFL-211ENST00000584541 BAALC-AS2P0C853 105 aa10.82□□□□□ -0.68
RFFL-211ENST00000584541 KRTAP13-2Q52LG2 175 aa10.82□□□□□ -0.68
RFFL-211ENST00000584541 GTF2H5Q6ZYL4 71 aa10.82□□□□□ -0.68
RFFL-211ENST00000584541 HERC1Q15751 4861 aa10.81□□□□□ -0.68
RFFL-211ENST00000584541 MOBPQ13875 183 aa10.81□□□□□ -0.68
RFFL-211ENST00000584541 NDUFV3P56181 108 aaKnown RBP10.8□□□□□ -0.68
RFFL-211ENST00000584541 Q8NBF4 154 aa10.8□□□□□ -0.68
RFFL-211ENST00000584541 UBE2V1Q13404 147 aa10.79□□□□□ -0.68
RFFL-211ENST00000584541 KRTAP10-8P60410 259 aa10.78□□□□□ -0.68
RFFL-211ENST00000584541 SSBP3-AS1Q7Z2R9 100 aa10.78□□□□□ -0.68
RFFL-211ENST00000584541 J3QL48 77 aa10.76□□□□□ -0.69
RFFL-211ENST00000584541 H3BT86 120 aa10.75□□□□□ -0.69
RFFL-211ENST00000584541 ANKRD29Q8N6D5 301 aa10.75□□□□□ -0.69
RFFL-211ENST00000584541 MT1HL1P0DM35 61 aa10.73□□□□□ -0.69
RFFL-211ENST00000584541 MTURNQ8N3F0 131 aa10.73□□□□□ -0.69
RFFL-211ENST00000584541 IGLV8-61A0A075B6I0 122 aa10.72□□□□□ -0.69
RFFL-211ENST00000584541 Q6JHZ5 121 aa10.72□□□□□ -0.69
RFFL-211ENST00000584541 FAT3Q8TDW7 4589 aa10.72□□□□□ -0.69
RFFL-211ENST00000584541 C4orf48Q5BLP8 95 aa10.71□□□□□ -0.69
RFFL-211ENST00000584541 LINC00304Q8N9R0 145 aa10.7□□□□□ -0.7
RFFL-211ENST00000584541 LRP1Q07954 4544 aaKnown RBP10.69□□□□□ -0.7
RFFL-211ENST00000584541 A0A1B0GV72 72 aa10.69□□□□□ -0.7
RFFL-211ENST00000584541 A0A1B0GV90 55 aa10.68□□□□□ -0.7
RFFL-211ENST00000584541 JMJD7-PLA2G4BH0Y9G9 81 aa10.68□□□□□ -0.7
RFFL-211ENST00000584541 SPAG11AQ6PDA7 123 aa10.68□□□□□ -0.7
RFFL-211ENST00000584541 MYCBP2O75592 4640 aa10.68□□□□□ -0.7
RFFL-211ENST00000584541 UBR4Q5T4S7 5183 aa10.67□□□□□ -0.7
RFFL-211ENST00000584541 RBM3P98179 157 aaKnown RBP10.67□□□□□ -0.7
RFFL-211ENST00000584541 IGFL1Q6UW32 110 aa10.66□□□□□ -0.7
RFFL-211ENST00000584541 F8W1H4 67 aa10.65□□□□□ -0.7
RFFL-211ENST00000584541 DSCR8Q96T75 97 aa10.65□□□□□ -0.7
RFFL-211ENST00000584541 PRO0461Q9UI25 63 aa10.65□□□□□ -0.7
RFFL-211ENST00000584541 DMBT1Q9UGM3 2413 aaPredicted RBP10.64□□□□□ -0.71
RFFL-211ENST00000584541 SMCPP49901 116 aaPredicted RBP10.63□□□□□ -0.71
RFFL-211ENST00000584541 CD164Q04900 197 aa10.63□□□□□ -0.71
RFFL-211ENST00000584541 A0A0G2JQZ4 141 aa10.62□□□□□ -0.71
RFFL-211ENST00000584541 SPINK1P00995 79 aa10.62□□□□□ -0.71
RFFL-211ENST00000584541 HRCT1Q6UXD1 115 aa10.62□□□□□ -0.71
RFFL-211ENST00000584541 TNXBP22105 4242 aa10.6□□□□□ -0.71
RFFL-211ENST00000584541 TRBV7-4A0A0J9YYF1 115 aa10.59□□□□□ -0.71
RFFL-211ENST00000584541 OBSCN-AS1Q96MR7 158 aa10.59□□□□□ -0.71
RFFL-211ENST00000584541 TEN1Q86WV5 123 aa10.58□□□□□ -0.72
RFFL-211ENST00000584541 PDE6GP18545 87 aa10.57□□□□□ -0.72
RFFL-211ENST00000584541 RPS29P62273 56 aaKnown RBP10.57□□□□□ -0.72
RFFL-211ENST00000584541 C14orf132Q9NPU4 83 aa10.57□□□□□ -0.72
RFFL-211ENST00000584541 Q6Q795 121 aa10.56□□□□□ -0.72
RFFL-211ENST00000584541 LIMD2Q9BT23 127 aa10.56□□□□□ -0.72
RFFL-211ENST00000584541 LOC110117498A0A087WWA1 95 aa10.55□□□□□ -0.72
RFFL-211ENST00000584541 CCKP06307 115 aa10.55□□□□□ -0.72
RFFL-211ENST00000584541 C21orf62-AS1Q17RA5 79 aa10.55□□□□□ -0.72
RFFL-211ENST00000584541 TRBV7-7A0A0K0K1E9 115 aa10.54□□□□□ -0.72
RFFL-211ENST00000584541 VPS25Q9BRG1 176 aa10.54□□□□□ -0.72
RFFL-211ENST00000584541 A0A1W2PNM2 257 aa10.53□□□□□ -0.72
RFFL-211ENST00000584541 Q6ZQT0 140 aa10.52□□□□□ -0.73
RFFL-211ENST00000584541 ETDBQ3ZM63 59 aa10.5□□□□□ -0.73
RFFL-211ENST00000584541 Q5XG85 94 aa10.48□□□□□ -0.73
RFFL-211ENST00000584541 SS18L2Q9UHA2 77 aa10.48□□□□□ -0.73
RFFL-211ENST00000584541 A0A087WSZ3 146 aa10.47□□□□□ -0.73
RFFL-211ENST00000584541 A0A1B0GW54 56 aa10.45□□□□□ -0.74
RFFL-211ENST00000584541 ASB16-AS1Q495Z4 193 aa10.41□□□□□ -0.74
RFFL-211ENST00000584541 RETNLBQ9BQ08 111 aa10.4□□□□□ -0.74
RFFL-211ENST00000584541 PRR4Q16378 134 aa10.35□□□□□ -0.75
RFFL-211ENST00000584541 C1orf195Q5TG92 126 aa10.35□□□□□ -0.75
RFFL-211ENST00000584541 FP248Q71RG6 208 aaPredicted RBP10.35□□□□□ -0.75
RFFL-211ENST00000584541 NREPQ16612 68 aa10.31□□□□□ -0.76
RFFL-211ENST00000584541 IGLV7-46A0A075B6I9 117 aa10.29□□□□□ -0.76
RFFL-211ENST00000584541 Q96NJ1 140 aa10.28□□□□□ -0.76
RFFL-211ENST00000584541 LINC00472Q9H8W2 130 aa10.27□□□□□ -0.77
RFFL-211ENST00000584541 IGKV4-1P06312 121 aa10.26□□□□□ -0.77
RFFL-211ENST00000584541 ACYP1P07311 99 aa10.26□□□□□ -0.77
RFFL-211ENST00000584541 UBL5Q9BZL1 73 aa10.26□□□□□ -0.77
RFFL-211ENST00000584541 J3KT08 172 aa10.25□□□□□ -0.77
RFFL-211ENST00000584541 J3QR89 54 aa10.25□□□□□ -0.77
RFFL-211ENST00000584541 SIGMAR1Q99720 223 aa10.25□□□□□ -0.77
RFFL-211ENST00000584541 LINC00846Q9NV44 126 aa10.25□□□□□ -0.77
RFFL-211ENST00000584541 HMCN2Q8NDA2 5059 aa10.24□□□□□ -0.77
RFFL-211ENST00000584541 DEFB116Q30KQ4 102 aa10.24□□□□□ -0.77
RFFL-211ENST00000584541 FAM240AA0A1B0GVK7 77 aa10.23□□□□□ -0.77
RFFL-211ENST00000584541 Q6ZVQ6 151 aa10.23□□□□□ -0.77
RFFL-211ENST00000584541 BPY2O14599 106 aa10.17□□□□□ -0.78
RFFL-211ENST00000584541 TPRXLQ17RH7 258 aa10.17□□□□□ -0.78
RFFL-211ENST00000584541 NDUFB1O75438 58 aa10.16□□□□□ -0.78
RFFL-211ENST00000584541 KRTAP13-3Q3SY46 172 aa10.14□□□□□ -0.79
RFFL-211ENST00000584541 A8MWP4 228 aa10.13□□□□□ -0.79
RFFL-211ENST00000584541 C9orf92A6NGG3 77 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms