RNA–Protein interactions for RNA: ENST00000584328.1

NF1-223, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-223ENST00000584328 PDE6GP18545 87 aa3.33□□□□□ -1.88
NF1-223ENST00000584328 RNASE13Q5GAN3 156 aaKnown RBP3.33□□□□□ -1.88
NF1-223ENST00000584328 DPH3Q96FX2 82 aa3.33□□□□□ -1.88
NF1-223ENST00000584328 LINC00167Q96N53 147 aa3.33□□□□□ -1.88
NF1-223ENST00000584328 TRAV13-1A0A0B4J241 112 aa3.32□□□□□ -1.88
NF1-223ENST00000584328 LOC107984640A0A0U1RRK4 108 aa3.32□□□□□ -1.88
NF1-223ENST00000584328 LINC00158P58513 81 aa3.32□□□□□ -1.88
NF1-223ENST00000584328 LCE3AQ5TA76 89 aa3.32□□□□□ -1.88
NF1-223ENST00000584328 KRTAP26-1Q6PEX3 210 aa3.32□□□□□ -1.88
NF1-223ENST00000584328 ENHOQ6UWT2 76 aa3.32□□□□□ -1.88
NF1-223ENST00000584328 C6orf223Q8N319 242 aa3.32□□□□□ -1.88
NF1-223ENST00000584328 MIR7-3HGQ8N6C7 128 aa3.32□□□□□ -1.88
NF1-223ENST00000584328 SMIM11BQ8TCY0 68 aa3.32□□□□□ -1.88
NF1-223ENST00000584328 UBL5Q9BZL1 73 aa3.32□□□□□ -1.88
NF1-223ENST00000584328 PCLOQ9Y6V0 5065 aa3.31□□□□□ -1.88
NF1-223ENST00000584328 IGLV4-60A0A075B6I1 120 aa3.31□□□□□ -1.88
NF1-223ENST00000584328 M0R2N4 97 aa3.31□□□□□ -1.88
NF1-223ENST00000584328 NDUFC1O43677 76 aa3.31□□□□□ -1.88
NF1-223ENST00000584328 ATP5EP56381 51 aaPredicted RBP3.31□□□□□ -1.88
NF1-223ENST00000584328 COX17Q14061 63 aa3.31□□□□□ -1.88
NF1-223ENST00000584328 C1orf134Q5TEV5 83 aa3.31□□□□□ -1.88
NF1-223ENST00000584328 LINC00336Q6ZUF6 198 aa3.31□□□□□ -1.88
NF1-223ENST00000584328 LINC00337Q8N6G1 96 aa3.31□□□□□ -1.88
NF1-223ENST00000584328 LINC00846Q9NV44 126 aa3.31□□□□□ -1.88
NF1-223ENST00000584328 ABCA13Q86UQ4 5058 aa3.3□□□□□ -1.88
NF1-223ENST00000584328 IGKV2-28A0A075B6P5 120 aa3.3□□□□□ -1.88
NF1-223ENST00000584328 TRAV7A0A075B6U4 112 aa3.3□□□□□ -1.88
NF1-223ENST00000584328 LRCOL1A6NCL2 159 aa3.3□□□□□ -1.88
NF1-223ENST00000584328 LECT2O14960 151 aa3.3□□□□□ -1.88
NF1-223ENST00000584328 IGKV2D-28P01615 120 aa3.3□□□□□ -1.88
NF1-223ENST00000584328 KRTAP11-1Q8IUC1 163 aa3.3□□□□□ -1.88
NF1-223ENST00000584328 Q9HAA7 133 aa3.3□□□□□ -1.88
NF1-223ENST00000584328 C14orf132Q9NPU4 83 aa3.3□□□□□ -1.88
NF1-223ENST00000584328 SERP1Q9Y6X1 66 aa3.3□□□□□ -1.88
NF1-223ENST00000584328 LOC110117498A0A087WWA1 95 aa3.29□□□□□ -1.88
NF1-223ENST00000584328 IGHV3OR16-9A0A0B4J2B5 98 aa3.29□□□□□ -1.88
NF1-223ENST00000584328 IGKV3D-7A0A0C4DH55 119 aa3.29□□□□□ -1.88
NF1-223ENST00000584328 SS18Q15532 418 aa3.29□□□□□ -1.88
NF1-223ENST00000584328 C6orf226Q5I0X4 101 aa3.29□□□□□ -1.88
NF1-223ENST00000584328 Q8IZM0 81 aa3.29□□□□□ -1.88
NF1-223ENST00000584328 KLK12Q9UKR0 248 aa3.29□□□□□ -1.88
NF1-223ENST00000584328 HSPG2P98160 4391 aa3.28□□□□□ -1.88
NF1-223ENST00000584328 FAM168BA1KXE4 195 aa3.28□□□□□ -1.88
NF1-223ENST00000584328 CXCL6P80162 114 aa3.28□□□□□ -1.88
NF1-223ENST00000584328 REG3AQ06141 175 aa3.28□□□□□ -1.88
NF1-223ENST00000584328 LINC00269Q8N2A0 174 aa3.28□□□□□ -1.88
NF1-223ENST00000584328 Q8N814 137 aa3.28□□□□□ -1.88
NF1-223ENST00000584328 TOMM7Q9P0U1 55 aa3.28□□□□□ -1.88
NF1-223ENST00000584328 A0A087WTM6 91 aa3.27□□□□□ -1.89
NF1-223ENST00000584328 SMIM26A0A096LP01 95 aa3.27□□□□□ -1.89
NF1-223ENST00000584328 FAM236DA0A1B0GTK5 79 aa3.27□□□□□ -1.89
NF1-223ENST00000584328 NCR3O14931 201 aa3.27□□□□□ -1.89
NF1-223ENST00000584328 ERC2-IT1O76042 136 aa3.27□□□□□ -1.89
NF1-223ENST00000584328 ANGP03950 147 aaKnown RBP3.27□□□□□ -1.89
NF1-223ENST00000584328 FAM236CP0DP71 79 aa3.27□□□□□ -1.89
NF1-223ENST00000584328 RBM3P98179 157 aaKnown RBP3.27□□□□□ -1.89
NF1-223ENST00000584328 KLKP1Q107X0 134 aa3.27□□□□□ -1.89
NF1-223ENST00000584328 DHRS4-AS1Q9P1J3 65 aa3.27□□□□□ -1.89
NF1-223ENST00000584328 LINC00959A0A1B0GUT2 108 aa3.26□□□□□ -1.89
NF1-223ENST00000584328 XCL1P47992 114 aa3.26□□□□□ -1.89
NF1-223ENST00000584328 TRBV7-6A0A0J9YX20 115 aa3.25□□□□□ -1.89
NF1-223ENST00000584328 PFN2P35080 140 aa3.25□□□□□ -1.89
NF1-223ENST00000584328 LINC00575Q6W349 94 aa3.25□□□□□ -1.89
NF1-223ENST00000584328 CHCHD10Q8WYQ3 142 aaPredicted RBP3.25□□□□□ -1.89
NF1-223ENST00000584328 RMI2Q96E14 147 aa3.25□□□□□ -1.89
NF1-223ENST00000584328 DSCR8Q96T75 97 aa3.25□□□□□ -1.89
NF1-223ENST00000584328 PRO0628Q9UI54 55 aa3.25□□□□□ -1.89
NF1-223ENST00000584328 FAT1Q14517 4588 aa3.25□□□□□ -1.89
NF1-223ENST00000584328 IGKV2D-24A0A075B6R9 120 aa3.24□□□□□ -1.89
NF1-223ENST00000584328 A0A087WVE0 104 aa3.24□□□□□ -1.89
NF1-223ENST00000584328 A0A1B0GW54 56 aa3.24□□□□□ -1.89
NF1-223ENST00000584328 Q5XG85 94 aa3.24□□□□□ -1.89
NF1-223ENST00000584328 CLPSL2Q6UWE3 100 aa3.24□□□□□ -1.89
NF1-223ENST00000584328 Q6ZQT0 140 aa3.24□□□□□ -1.89
NF1-223ENST00000584328 C20orf197Q8N268 126 aa3.24□□□□□ -1.89
NF1-223ENST00000584328 C15orf56Q8N910 161 aa3.24□□□□□ -1.89
NF1-223ENST00000584328 ANAPC11Q9NYG5 84 aa3.24□□□□□ -1.89
NF1-223ENST00000584328 VPS13BQ7Z7G8 4022 aa3.24□□□□□ -1.89
NF1-223ENST00000584328 IGLV10-54A0A075B6I4 117 aa3.23□□□□□ -1.89
NF1-223ENST00000584328 TRAV23DV6A0A075B6W5 121 aa3.23□□□□□ -1.89
NF1-223ENST00000584328 GVQW2A0A096LPI5 108 aaPredicted RBP3.23□□□□□ -1.89
NF1-223ENST00000584328 H7BZZ5 65 aa3.23□□□□□ -1.89
NF1-223ENST00000584328 CNBPP62633 177 aaKnown RBP3.23□□□□□ -1.89
NF1-223ENST00000584328 C9orf129Q5T035 196 aaKnown RBP3.23□□□□□ -1.89
NF1-223ENST00000584328 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.23□□□□□ -1.89
NF1-223ENST00000584328 LAMTOR3Q9UHA4 124 aa3.23□□□□□ -1.89
NF1-223ENST00000584328 PSCAO43653 123 aa3.22□□□□□ -1.89
NF1-223ENST00000584328 C4orf26Q17RF5 130 aa3.22□□□□□ -1.89
NF1-223ENST00000584328 C6orf99Q4VX62 202 aa3.22□□□□□ -1.89
NF1-223ENST00000584328 HRCT1Q6UXD1 115 aa3.22□□□□□ -1.89
NF1-223ENST00000584328 Q6ZSA8 131 aa3.22□□□□□ -1.89
NF1-223ENST00000584328 FAM19A1Q7Z5A9 133 aa3.22□□□□□ -1.89
NF1-223ENST00000584328 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
NF1-223ENST00000584328 IGKV3OR2-268A0A0C4DH90 116 aa3.21□□□□□ -1.9
NF1-223ENST00000584328 IGLV6-57P01721 117 aa3.21□□□□□ -1.9
NF1-223ENST00000584328 KRTAP10-8P60410 259 aa3.21□□□□□ -1.9
NF1-223ENST00000584328 HAMPP81172 84 aa3.21□□□□□ -1.9
NF1-223ENST00000584328 KIAA0087Q14695 138 aa3.21□□□□□ -1.9
NF1-223ENST00000584328 CYSTM1Q9H1C7 97 aa3.21□□□□□ -1.9
NF1-223ENST00000584328 TRBV7-4A0A0J9YYF1 115 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms