RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 C9JQL5 133 aa3.05□□□□□ -1.92
VAPA-207ENST00000583879 H3BRM9 83 aa3.05□□□□□ -1.92
VAPA-207ENST00000583879 H3BT86 120 aa3.05□□□□□ -1.92
VAPA-207ENST00000583879 SNCGO76070 127 aa3.05□□□□□ -1.92
VAPA-207ENST00000583879 SRP19P09132 144 aaKnown RBP3.05□□□□□ -1.92
VAPA-207ENST00000583879 IGLC3P0DOY3 106 aa3.05□□□□□ -1.92
VAPA-207ENST00000583879 ADCYAP1P18509 176 aa3.05□□□□□ -1.92
VAPA-207ENST00000583879 KRTAP13-1Q8IUC0 172 aa3.05□□□□□ -1.92
VAPA-207ENST00000583879 Q8IZM0 81 aa3.05□□□□□ -1.92
VAPA-207ENST00000583879 URB1-AS1Q96HZ7 61 aa3.05□□□□□ -1.92
VAPA-207ENST00000583879 AMELXQ99217 191 aa3.05□□□□□ -1.92
VAPA-207ENST00000583879 MUC17Q685J3 4493 aa3.05□□□□□ -1.92
VAPA-207ENST00000583879 F8VRH5 84 aa3.04□□□□□ -1.92
VAPA-207ENST00000583879 UBE2AP49459 152 aa3.04□□□□□ -1.92
VAPA-207ENST00000583879 HINT1P49773 126 aaPredicted RBP3.04□□□□□ -1.92
VAPA-207ENST00000583879 RPL23P62829 140 aaKnown RBP3.04□□□□□ -1.92
VAPA-207ENST00000583879 ZC2HC1BQ5TFG8 222 aa3.04□□□□□ -1.92
VAPA-207ENST00000583879 TMEM136Q6ZRR5 245 aa3.04□□□□□ -1.92
VAPA-207ENST00000583879 NKAPP1Q8N9T2 125 aa3.04□□□□□ -1.92
VAPA-207ENST00000583879 ASB16-AS1Q495Z4 193 aa3.03□□□□□ -1.92
VAPA-207ENST00000583879 SPAG11AQ6PDA7 123 aa3.03□□□□□ -1.92
VAPA-207ENST00000583879 C2orf66Q6UXQ4 117 aa3.03□□□□□ -1.92
VAPA-207ENST00000583879 ORMDL3Q8N138 153 aa3.03□□□□□ -1.92
VAPA-207ENST00000583879 TIMM17AQ99595 171 aa3.03□□□□□ -1.92
VAPA-207ENST00000583879 RPS10P5Q9NQ39 176 aa3.03□□□□□ -1.92
VAPA-207ENST00000583879 CDKN2A-AS1Q9UH64 79 aa3.03□□□□□ -1.92
VAPA-207ENST00000583879 IGLV5-37A0A075B6J1 123 aa3.02□□□□□ -1.93
VAPA-207ENST00000583879 IGLV5-39A0A0G2JS06 123 aa3.02□□□□□ -1.93
VAPA-207ENST00000583879 IGIPA6NJ69 53 aa3.02□□□□□ -1.93
VAPA-207ENST00000583879 TMEM256-PLSCR3K7ERE1 68 aa3.02□□□□□ -1.93
VAPA-207ENST00000583879 COX7CP15954 63 aa3.02□□□□□ -1.93
VAPA-207ENST00000583879 CXCL6P80162 114 aa3.02□□□□□ -1.93
VAPA-207ENST00000583879 FP248Q71RG6 208 aaPredicted RBP3.02□□□□□ -1.93
VAPA-207ENST00000583879 PCP2Q8IVA1 136 aa3.02□□□□□ -1.93
VAPA-207ENST00000583879 PRELID3AQ96N28 172 aa3.02□□□□□ -1.93
VAPA-207ENST00000583879 KRTAP4-1Q9BYQ7 146 aa3.02□□□□□ -1.93
VAPA-207ENST00000583879 ZNF706Q9Y5V0 76 aaPredicted RBP3.02□□□□□ -1.93
VAPA-207ENST00000583879 IGKV2-28A0A075B6P5 120 aa3.01□□□□□ -1.93
VAPA-207ENST00000583879 A0A1B0GW54 56 aa3.01□□□□□ -1.93
VAPA-207ENST00000583879 IGKV2D-28P01615 120 aa3.01□□□□□ -1.93
VAPA-207ENST00000583879 NPC2P61916 151 aa3.01□□□□□ -1.93
VAPA-207ENST00000583879 KRTAP13-3Q3SY46 172 aa3.01□□□□□ -1.93
VAPA-207ENST00000583879 BVES-AS1Q5T3Y7 98 aa3.01□□□□□ -1.93
VAPA-207ENST00000583879 Q8N8P6 123 aa3.01□□□□□ -1.93
VAPA-207ENST00000583879 SPCS1Q9Y6A9 102 aa3.01□□□□□ -1.93
VAPA-207ENST00000583879 A0A1W2PPM0 123 aa3□□□□□ -1.93
VAPA-207ENST00000583879 SMIM1B2RUZ4 78 aa3□□□□□ -1.93
VAPA-207ENST00000583879 K7EMI3 77 aa3□□□□□ -1.93
VAPA-207ENST00000583879 HERVK_113P61574 105 aa3□□□□□ -1.93
VAPA-207ENST00000583879 PRLHP81277 87 aa3□□□□□ -1.93
VAPA-207ENST00000583879 SPATA45Q537H7 98 aa3□□□□□ -1.93
VAPA-207ENST00000583879 ORMDL2Q53FV1 153 aa3□□□□□ -1.93
VAPA-207ENST00000583879 COX7B2Q8TF08 81 aa3□□□□□ -1.93
VAPA-207ENST00000583879 HBDP02042 147 aa2.99□□□□□ -1.93
VAPA-207ENST00000583879 PMCHL1Q16048 86 aa2.99□□□□□ -1.93
VAPA-207ENST00000583879 LINC01554Q52M75 96 aa2.99□□□□□ -1.93
VAPA-207ENST00000583879 PPDPFLQ8WWR9 84 aa2.99□□□□□ -1.93
VAPA-207ENST00000583879 PMCHL2Q9BQD1 86 aa2.99□□□□□ -1.93
VAPA-207ENST00000583879 IGKV2D-30A0A075B6S6 120 aa2.98□□□□□ -1.93
VAPA-207ENST00000583879 TRBV7-7A0A0K0K1E9 115 aa2.98□□□□□ -1.93
VAPA-207ENST00000583879 SPINK1P00995 79 aa2.98□□□□□ -1.93
VAPA-207ENST00000583879 DAND5Q8N907 189 aa2.98□□□□□ -1.93
VAPA-207ENST00000583879 SPRR4Q96PI1 79 aa2.98□□□□□ -1.93
VAPA-207ENST00000583879 HIGD2AQ9BW72 106 aa2.98□□□□□ -1.93
VAPA-207ENST00000583879 NXT2Q9NPJ8 142 aaKnown RBP2.98□□□□□ -1.93
VAPA-207ENST00000583879 ADAMTSL4-AS1Q5T5F5 129 aa2.97□□□□□ -1.93
VAPA-207ENST00000583879 C7orf65Q6ZTY9 151 aa2.97□□□□□ -1.93
VAPA-207ENST00000583879 Q8NBF4 154 aa2.97□□□□□ -1.93
VAPA-207ENST00000583879 SCGB3A1Q96QR1 104 aa2.97□□□□□ -1.93
VAPA-207ENST00000583879 K7ERJ3 54 aa2.96□□□□□ -1.94
VAPA-207ENST00000583879 TCL1BO95988 128 aa2.96□□□□□ -1.94
VAPA-207ENST00000583879 ATP5EP56381 51 aaPredicted RBP2.96□□□□□ -1.94
VAPA-207ENST00000583879 C18orf32Q8TCD1 76 aa2.96□□□□□ -1.94
VAPA-207ENST00000583879 DSCR8Q96T75 97 aa2.96□□□□□ -1.94
VAPA-207ENST00000583879 OCR1Q9BZK8 76 aa2.96□□□□□ -1.94
VAPA-207ENST00000583879 SND1-IT1Q9HBX3 110 aa2.96□□□□□ -1.94
VAPA-207ENST00000583879 SYS1-DBNDD2H3BUS1 97 aa2.95□□□□□ -1.94
VAPA-207ENST00000583879 ATOX1O00244 68 aa2.95□□□□□ -1.94
VAPA-207ENST00000583879 IGKCP01834 107 aa2.95□□□□□ -1.94
VAPA-207ENST00000583879 CFC1BP0CG36 223 aa2.95□□□□□ -1.94
VAPA-207ENST00000583879 MT1HP80294 61 aa2.95□□□□□ -1.94
VAPA-207ENST00000583879 COX17Q14061 63 aa2.95□□□□□ -1.94
VAPA-207ENST00000583879 KRTAP19-2Q3LHN2 52 aa2.95□□□□□ -1.94
VAPA-207ENST00000583879 ETDBQ3ZM63 59 aa2.95□□□□□ -1.94
VAPA-207ENST00000583879 Q8NDZ9 215 aa2.95□□□□□ -1.94
VAPA-207ENST00000583879 NDUFA12Q9UI09 145 aa2.95□□□□□ -1.94
VAPA-207ENST00000583879 LINC01549A6NIU2 74 aa2.94□□□□□ -1.94
VAPA-207ENST00000583879 H3BUT2 72 aa2.94□□□□□ -1.94
VAPA-207ENST00000583879 RPS29P62273 56 aaKnown RBP2.94□□□□□ -1.94
VAPA-207ENST00000583879 SSBP3-AS1Q7Z2R9 100 aa2.94□□□□□ -1.94
VAPA-207ENST00000583879 SMCR5Q8TEV8 140 aa2.94□□□□□ -1.94
VAPA-207ENST00000583879 KRTAP16-1A8MUX0 517 aa2.93□□□□□ -1.94
VAPA-207ENST00000583879 SLC25A20O43772 301 aa2.93□□□□□ -1.94
VAPA-207ENST00000583879 HIST1H4AP62805 103 aaKnown RBP2.93□□□□□ -1.94
VAPA-207ENST00000583879 LINC00483Q53H64 154 aa2.93□□□□□ -1.94
VAPA-207ENST00000583879 Q8N377 158 aa2.93□□□□□ -1.94
VAPA-207ENST00000583879 FAM19A2Q8N3H0 131 aa2.93□□□□□ -1.94
VAPA-207ENST00000583879 ZNF625Q96I27 306 aaPredicted RBP2.93□□□□□ -1.94
VAPA-207ENST00000583879 LINC01546A6NGU7 62 aa2.92□□□□□ -1.94
VAPA-207ENST00000583879 TIMM17BO60830 172 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms