RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877	SLC25A20	O43772	301 aa		4.82	□□□□□ -1.64
NUP85-223	ENST00000583877	FXYD2	P54710	66 aa		4.82	□□□□□ -1.64
NUP85-223	ENST00000583877	MOBP	Q13875	183 aa		4.82	□□□□□ -1.64
NUP85-223	ENST00000583877	LINC00483	Q53H64	154 aa		4.82	□□□□□ -1.64
NUP85-223	ENST00000583877	SFTA2	Q6UW10	78 aa		4.82	□□□□□ -1.64
NUP85-223	ENST00000583877	HIST1H4G	Q99525	98 aa		4.82	□□□□□ -1.64
NUP85-223	ENST00000583877	SSBP3-AS1	Q7Z2R9	100 aa		4.81	□□□□□ -1.64
NUP85-223	ENST00000583877	RAB37	Q96AX2	223 aa		4.81	□□□□□ -1.64
NUP85-223	ENST00000583877	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.81	□□□□□ -1.64
NUP85-223	ENST00000583877	NHP2	Q9NX24	153 aa	Known RBP	4.81	□□□□□ -1.64
NUP85-223	ENST00000583877	TRBV20-1	A0A075B6N2	111 aa		4.8	□□□□□ -1.64
NUP85-223	ENST00000583877	C11orf86	A6NJI1	115 aa		4.8	□□□□□ -1.64
NUP85-223	ENST00000583877	SPRR1A	P35321	89 aa		4.8	□□□□□ -1.64
NUP85-223	ENST00000583877	MEIG1	Q5JSS6	88 aa		4.8	□□□□□ -1.64
NUP85-223	ENST00000583877	MTURN	Q8N3F0	131 aa		4.8	□□□□□ -1.64
NUP85-223	ENST00000583877	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.79	□□□□□ -1.64
NUP85-223	ENST00000583877	KRTAP10-6	P60371	365 aa	Predicted RBP	4.79	□□□□□ -1.64
NUP85-223	ENST00000583877	SIGMAR1	Q99720	223 aa		4.79	□□□□□ -1.64
NUP85-223	ENST00000583877	KCNQ1DN	Q9H478	68 aa		4.79	□□□□□ -1.64
NUP85-223	ENST00000583877	IGLV8-61	A0A075B6I0	122 aa		4.78	□□□□□ -1.64
NUP85-223	ENST00000583877		H3BMG7	143 aa		4.78	□□□□□ -1.64
NUP85-223	ENST00000583877	C9orf153	Q5TBE3	101 aa		4.78	□□□□□ -1.64
NUP85-223	ENST00000583877	ZNF815P	A8K554	130 aa		4.77	□□□□□ -1.65
NUP85-223	ENST00000583877	SCGB1D4	Q6XE38	83 aa		4.77	□□□□□ -1.65
NUP85-223	ENST00000583877	TRBV10-3	A0A0K0K1G6	114 aa		4.76	□□□□□ -1.65
NUP85-223	ENST00000583877		A0A1B0GV72	72 aa		4.76	□□□□□ -1.65
NUP85-223	ENST00000583877		M0R2T5	61 aa		4.76	□□□□□ -1.65
NUP85-223	ENST00000583877	PCOTH	Q58A44	107 aa		4.76	□□□□□ -1.65
NUP85-223	ENST00000583877	C9orf92	A6NGG3	77 aa		4.75	□□□□□ -1.65
NUP85-223	ENST00000583877	ERC2-IT1	O76042	136 aa		4.75	□□□□□ -1.65
NUP85-223	ENST00000583877	MIR7-3HG	Q8N6C7	128 aa		4.75	□□□□□ -1.65
NUP85-223	ENST00000583877	PRO0461	Q9UI25	63 aa		4.75	□□□□□ -1.65
NUP85-223	ENST00000583877		A0A0B4J2C4	111 aa		4.74	□□□□□ -1.65
NUP85-223	ENST00000583877		K7ERJ3	54 aa		4.74	□□□□□ -1.65
NUP85-223	ENST00000583877	LEPROT	O15243	131 aa		4.74	□□□□□ -1.65
NUP85-223	ENST00000583877	LGALS3	P17931	250 aa	Known RBP	4.74	□□□□□ -1.65
NUP85-223	ENST00000583877	PPDPFL	Q8WWR9	84 aa		4.74	□□□□□ -1.65
NUP85-223	ENST00000583877	NAA38	Q9BRA0	125 aa	Known RBP	4.74	□□□□□ -1.65
NUP85-223	ENST00000583877	TTTY13	Q9BZ97	58 aa		4.74	□□□□□ -1.65
NUP85-223	ENST00000583877	HRCT1	Q6UXD1	115 aa		4.73	□□□□□ -1.65
NUP85-223	ENST00000583877	TEN1	Q86WV5	123 aa		4.73	□□□□□ -1.65
NUP85-223	ENST00000583877		Q9BRP9	147 aa		4.73	□□□□□ -1.65
NUP85-223	ENST00000583877	PRO1854	Q9UHT4	67 aa		4.73	□□□□□ -1.65
NUP85-223	ENST00000583877	KRTAP4-8	A0A0G2JLE6	195 aa		4.72	□□□□□ -1.65
NUP85-223	ENST00000583877	TMEM223	A0PJW6	202 aa		4.72	□□□□□ -1.65
NUP85-223	ENST00000583877		J3QQQ9	107 aa		4.72	□□□□□ -1.65
NUP85-223	ENST00000583877	HERV-K104	P63124	156 aa		4.72	□□□□□ -1.65
NUP85-223	ENST00000583877	ETDB	Q3ZM63	59 aa		4.72	□□□□□ -1.65
NUP85-223	ENST00000583877	S100A7L2	Q5SY68	101 aa		4.72	□□□□□ -1.65
NUP85-223	ENST00000583877	LCE1D	Q5T752	114 aa		4.71	□□□□□ -1.66
NUP85-223	ENST00000583877	COX6B2	Q6YFQ2	88 aa		4.71	□□□□□ -1.66
NUP85-223	ENST00000583877		Q6ZRX8	168 aa		4.71	□□□□□ -1.66
NUP85-223	ENST00000583877		Q75L30	129 aa		4.71	□□□□□ -1.66
NUP85-223	ENST00000583877	COPS9	Q8WXC6	57 aa		4.71	□□□□□ -1.66
NUP85-223	ENST00000583877	LIMD2	Q9BT23	127 aa		4.71	□□□□□ -1.66
NUP85-223	ENST00000583877	SPANXD	Q9BXN6	97 aa		4.71	□□□□□ -1.66
NUP85-223	ENST00000583877	LOC107984156	A0A0G2JMH3	177 aa		4.7	□□□□□ -1.66
NUP85-223	ENST00000583877		A0A0J9YXY3	114 aa		4.7	□□□□□ -1.66
NUP85-223	ENST00000583877	TIMM17B	O60830	172 aa		4.7	□□□□□ -1.66
NUP85-223	ENST00000583877	IFITM1	P13164	125 aa		4.7	□□□□□ -1.66
NUP85-223	ENST00000583877	LCE5A	Q5TCM9	118 aa		4.7	□□□□□ -1.66
NUP85-223	ENST00000583877	ARL17A	Q8IVW1	177 aa		4.7	□□□□□ -1.66
NUP85-223	ENST00000583877	TRBV10-2	A0A0K0K1G8	114 aa		4.69	□□□□□ -1.66
NUP85-223	ENST00000583877	IGLV6-57	P01721	117 aa		4.69	□□□□□ -1.66
NUP85-223	ENST00000583877	COX6C	P09669	75 aa		4.69	□□□□□ -1.66
NUP85-223	ENST00000583877	CFC1	P0CG37	223 aa		4.69	□□□□□ -1.66
NUP85-223	ENST00000583877	SCGB1C2	P0DMR2	95 aa		4.69	□□□□□ -1.66
NUP85-223	ENST00000583877	PSMB2	P49721	201 aa		4.69	□□□□□ -1.66
NUP85-223	ENST00000583877	ATXN8	Q156A1	80 aa		4.69	□□□□□ -1.66
NUP85-223	ENST00000583877	ST20-AS1	Q8NBB2	130 aa		4.69	□□□□□ -1.66
NUP85-223	ENST00000583877	SPANXC	Q9NY87	97 aa		4.69	□□□□□ -1.66
NUP85-223	ENST00000583877	SSPO	A2VEC9	5147 aa		4.68	□□□□□ -1.66
NUP85-223	ENST00000583877	TRAV23DV6	A0A075B6W5	121 aa		4.67	□□□□□ -1.66
NUP85-223	ENST00000583877		H3BT86	120 aa		4.67	□□□□□ -1.66
NUP85-223	ENST00000583877	TCL1B	O95988	128 aa		4.67	□□□□□ -1.66
NUP85-223	ENST00000583877		Q6Q795	121 aa		4.67	□□□□□ -1.66
NUP85-223	ENST00000583877		A4D1N5	150 aa		4.66	□□□□□ -1.66
NUP85-223	ENST00000583877	TSPEAR-AS2	P59090	65 aa		4.66	□□□□□ -1.66
NUP85-223	ENST00000583877	ANKRD29	Q8N6D5	301 aa		4.66	□□□□□ -1.66
NUP85-223	ENST00000583877	LAMTOR3	Q9UHA4	124 aa		4.66	□□□□□ -1.66
NUP85-223	ENST00000583877	FAM240A	A0A1B0GVK7	77 aa		4.65	□□□□□ -1.67
NUP85-223	ENST00000583877	ZNF73	O43830	326 aa	Predicted RBP	4.65	□□□□□ -1.67
NUP85-223	ENST00000583877	NPC2	P61916	151 aa		4.65	□□□□□ -1.67
NUP85-223	ENST00000583877	USH2A	O75445	5202 aa		4.65	□□□□□ -1.67
NUP85-223	ENST00000583877		H7C2G1	150 aa		4.64	□□□□□ -1.67
NUP85-223	ENST00000583877	NDUFC2	O95298	119 aa		4.64	□□□□□ -1.67
NUP85-223	ENST00000583877	SPRR1B	P22528	89 aa		4.64	□□□□□ -1.67
NUP85-223	ENST00000583877	MUSTN1	Q8IVN3	82 aa		4.64	□□□□□ -1.67
NUP85-223	ENST00000583877		C9JAW5	83 aa		4.63	□□□□□ -1.67
NUP85-223	ENST00000583877	ACYP1	P07311	99 aa		4.63	□□□□□ -1.67
NUP85-223	ENST00000583877	RPL37	P61927	97 aa	Known RBP	4.63	□□□□□ -1.67
NUP85-223	ENST00000583877		Q1RN00	199 aa		4.63	□□□□□ -1.67
NUP85-223	ENST00000583877	OR13C6P	Q8NH95	151 aa		4.63	□□□□□ -1.67
NUP85-223	ENST00000583877	LITAF	Q99732	161 aa		4.63	□□□□□ -1.67
NUP85-223	ENST00000583877	SNCG	O76070	127 aa		4.62	□□□□□ -1.67
NUP85-223	ENST00000583877	CD164	Q04900	197 aa		4.62	□□□□□ -1.67
NUP85-223	ENST00000583877	DEFB105A	Q8NG35	78 aa		4.62	□□□□□ -1.67
NUP85-223	ENST00000583877	LST1	O00453	97 aa		4.61	□□□□□ -1.67
NUP85-223	ENST00000583877		Q5XG85	94 aa		4.61	□□□□□ -1.67
NUP85-223	ENST00000583877	DHRS4-AS1	Q9P1J3	65 aa		4.61	□□□□□ -1.67

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