RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 A6NED7 52 aa6.84□□□□□ -1.31
RNF43-207ENST00000583753 TENM4Q6N022 2769 aa6.84□□□□□ -1.31
RNF43-207ENST00000583753 OTOGQ6ZRI0 2925 aa6.84□□□□□ -1.31
RNF43-207ENST00000583753 IGLV1-50A0A075B6I6 118 aa6.83□□□□□ -1.32
RNF43-207ENST00000583753 PHF5AQ7RTV0 110 aaKnown RBP6.83□□□□□ -1.32
RNF43-207ENST00000583753 STAB2Q8WWQ8 2551 aa6.82□□□□□ -1.32
RNF43-207ENST00000583753 IGFL1Q6UW32 110 aa6.81□□□□□ -1.32
RNF43-207ENST00000583753 TRRAPQ9Y4A5 3859 aa6.81□□□□□ -1.32
RNF43-207ENST00000583753 B9D2Q9BPU9 175 aa6.81□□□□□ -1.32
RNF43-207ENST00000583753 DSCR10P59022 87 aa6.8□□□□□ -1.32
RNF43-207ENST00000583753 KMT2BQ9UMN6 2715 aaPredicted RBP6.79□□□□□ -1.32
RNF43-207ENST00000583753 AKAP9Q99996 3911 aa6.79□□□□□ -1.32
RNF43-207ENST00000583753 IGHV6-1A0A0B4J1U7 121 aa6.79□□□□□ -1.32
RNF43-207ENST00000583753 IGLV5-48A0A075B6I7 105 aa6.78□□□□□ -1.32
RNF43-207ENST00000583753 TRAV22A0A0B4J277 110 aa6.78□□□□□ -1.32
RNF43-207ENST00000583753 hDV103S1A0JD37 113 aa6.77□□□□□ -1.33
RNF43-207ENST00000583753 KRTAP26-1Q6PEX3 210 aa6.76□□□□□ -1.33
RNF43-207ENST00000583753 RETNLBQ9BQ08 111 aa6.76□□□□□ -1.33
RNF43-207ENST00000583753 H3BNG1 76 aa6.75□□□□□ -1.33
RNF43-207ENST00000583753 DNAH10OSP0CZ25 163 aa6.75□□□□□ -1.33
RNF43-207ENST00000583753 SPAG11AQ6PDA7 123 aa6.74□□□□□ -1.33
RNF43-207ENST00000583753 KRTAP24-1Q3LI83 254 aa6.72□□□□□ -1.33
RNF43-207ENST00000583753 ANAPC11Q9NYG5 84 aa6.71□□□□□ -1.33
RNF43-207ENST00000583753 SRRM2Q9UQ35 2752 aaKnown RBP6.71□□□□□ -1.34
RNF43-207ENST00000583753 TENM2Q9NT68 2774 aa6.7□□□□□ -1.34
RNF43-207ENST00000583753 PRR15Q8IV56 129 aa6.67□□□□□ -1.34
RNF43-207ENST00000583753 C16orf90A8MZG2 172 aa6.67□□□□□ -1.34
RNF43-207ENST00000583753 SPRR4Q96PI1 79 aa6.67□□□□□ -1.34
RNF43-207ENST00000583753 A8MU10 97 aa6.66□□□□□ -1.34
RNF43-207ENST00000583753 MOBPQ13875 183 aa6.66□□□□□ -1.34
RNF43-207ENST00000583753 C14orf177Q52M58 125 aa6.66□□□□□ -1.34
RNF43-207ENST00000583753 CIRBP-AS1Q8TBR5 109 aa6.66□□□□□ -1.34
RNF43-207ENST00000583753 A0A1B0GW54 56 aa6.66□□□□□ -1.34
RNF43-207ENST00000583753 TLX1NBP0CAT3 122 aa6.65□□□□□ -1.34
RNF43-207ENST00000583753 COA5Q86WW8 74 aa6.65□□□□□ -1.34
RNF43-207ENST00000583753 A8MWP4 228 aa6.64□□□□□ -1.35
RNF43-207ENST00000583753 CD164Q04900 197 aa6.64□□□□□ -1.35
RNF43-207ENST00000583753 KRTAP7-1Q8IUC3 87 aa6.64□□□□□ -1.35
RNF43-207ENST00000583753 LIMD2Q9BT23 127 aa6.63□□□□□ -1.35
RNF43-207ENST00000583753 SPRR1AP35321 89 aa6.62□□□□□ -1.35
RNF43-207ENST00000583753 TNP2Q05952 138 aa6.62□□□□□ -1.35
RNF43-207ENST00000583753 PLA2G2DQ9UNK4 145 aa6.62□□□□□ -1.35
RNF43-207ENST00000583753 KRTAP4-16G5E9R7 235 aaPredicted RBP6.62□□□□□ -1.35
RNF43-207ENST00000583753 CSMD3Q7Z407 3707 aa6.61□□□□□ -1.35
RNF43-207ENST00000583753 CNBPP62633 177 aaKnown RBP6.61□□□□□ -1.35
RNF43-207ENST00000583753 KRTAP1-5Q9BYS1 174 aa6.61□□□□□ -1.35
RNF43-207ENST00000583753 Q1T7F1 81 aa6.6□□□□□ -1.35
RNF43-207ENST00000583753 K7EIL1 84 aa6.6□□□□□ -1.35
RNF43-207ENST00000583753 IGLV5-37A0A075B6J1 123 aa6.58□□□□□ -1.36
RNF43-207ENST00000583753 KRTAP11-1Q8IUC1 163 aa6.57□□□□□ -1.36
RNF43-207ENST00000583753 MDFIQ99750 246 aa6.56□□□□□ -1.36
RNF43-207ENST00000583753 Q8N9P0 234 aaPredicted RBP6.56□□□□□ -1.36
RNF43-207ENST00000583753 Q5VV11 94 aa6.56□□□□□ -1.36
RNF43-207ENST00000583753 PRR26Q8N8Z3 221 aa6.55□□□□□ -1.36
RNF43-207ENST00000583753 ZCCHC13Q8WW36 166 aaKnown RBP6.55□□□□□ -1.36
RNF43-207ENST00000583753 CYP4F30PQ9H0H9 118 aa6.55□□□□□ -1.36
RNF43-207ENST00000583753 RBM12B-AS1Q9P1G2 102 aa6.55□□□□□ -1.36
RNF43-207ENST00000583753 SPINK1P00995 79 aa6.54□□□□□ -1.36
RNF43-207ENST00000583753 C8orf17Q9NRJ1 99 aa6.54□□□□□ -1.36
RNF43-207ENST00000583753 ANK3Q12955 4377 aaKnown RBP6.54□□□□□ -1.36
RNF43-207ENST00000583753 COL7A1Q02388 2944 aa6.54□□□□□ -1.36
RNF43-207ENST00000583753 KTN1-AS1Q86SY8 53 aa6.53□□□□□ -1.36
RNF43-207ENST00000583753 IGLV8-61A0A075B6I0 122 aa6.53□□□□□ -1.36
RNF43-207ENST00000583753 H3BPC8 53 aa6.52□□□□□ -1.37
RNF43-207ENST00000583753 PANO1I0J062 215 aa6.52□□□□□ -1.37
RNF43-207ENST00000583753 LOC101927531A0A1B0GV80 90 aa6.51□□□□□ -1.37
RNF43-207ENST00000583753 MMP24-AS1A0A0U1RRL7 71 aa6.51□□□□□ -1.37
RNF43-207ENST00000583753 C9orf163Q8N9P6 203 aa6.51□□□□□ -1.37
RNF43-207ENST00000583753 NBDYA0A0U1RRE5 68 aa6.51□□□□□ -1.37
RNF43-207ENST00000583753 IGKV2D-30A0A075B6S6 120 aa6.5□□□□□ -1.37
RNF43-207ENST00000583753 IGKV2-30P06310 120 aa6.5□□□□□ -1.37
RNF43-207ENST00000583753 LINC00472Q9H8W2 130 aa6.5□□□□□ -1.37
RNF43-207ENST00000583753 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.5□□□□□ -1.37
RNF43-207ENST00000583753 MRPL34Q9BQ48 92 aaKnown RBP6.5□□□□□ -1.37
RNF43-207ENST00000583753 TP53AIP1Q9HCN2 124 aa6.5□□□□□ -1.37
RNF43-207ENST00000583753 ZNF706Q9Y5V0 76 aaPredicted RBP6.5□□□□□ -1.37
RNF43-207ENST00000583753 LY6G6CO95867 125 aa6.49□□□□□ -1.37
RNF43-207ENST00000583753 IGLV5-52A0A0A0MRZ9 124 aa6.48□□□□□ -1.37
RNF43-207ENST00000583753 A0A1B0GVX0 72 aa6.48□□□□□ -1.37
RNF43-207ENST00000583753 KRTAP29-1A8MX34 341 aaPredicted RBP6.48□□□□□ -1.37
RNF43-207ENST00000583753 SPANXA2-OT1Q8N9U9 137 aa6.47□□□□□ -1.37
RNF43-207ENST00000583753 PSORS1C2Q9UIG4 136 aa6.47□□□□□ -1.37
RNF43-207ENST00000583753 RTL8CO15255 209 aa6.45□□□□□ -1.38
RNF43-207ENST00000583753 LCE6AA0A183 80 aa6.45□□□□□ -1.38
RNF43-207ENST00000583753 A0A087X002 238 aa6.44□□□□□ -1.38
RNF43-207ENST00000583753 SPINK7P58062 85 aa6.44□□□□□ -1.38
RNF43-207ENST00000583753 NOTCH2NLQ7Z3S9 236 aa6.44□□□□□ -1.38
RNF43-207ENST00000583753 IGLV7-46A0A075B6I9 117 aa6.44□□□□□ -1.38
RNF43-207ENST00000583753 ATP11AUNQ6ZP68 121 aa6.44□□□□□ -1.38
RNF43-207ENST00000583753 TGP01266 2768 aa6.44□□□□□ -1.38
RNF43-207ENST00000583753 C4orf48Q5BLP8 95 aa6.44□□□□□ -1.38
RNF43-207ENST00000583753 SPACA4Q8TDM5 124 aa6.44□□□□□ -1.38
RNF43-207ENST00000583753 LCA10Q71F78 164 aa6.43□□□□□ -1.38
RNF43-207ENST00000583753 A0A1B0GU69 56 aa6.43□□□□□ -1.38
RNF43-207ENST00000583753 APLNQ9ULZ1 77 aa6.43□□□□□ -1.38
RNF43-207ENST00000583753 DMBT1Q9UGM3 2413 aaPredicted RBP6.43□□□□□ -1.38
RNF43-207ENST00000583753 HRES1P13985 223 aa6.42□□□□□ -1.38
RNF43-207ENST00000583753 ACYP2P14621 99 aa6.41□□□□□ -1.38
RNF43-207ENST00000583753 NUPR2A6NF83 97 aa6.4□□□□□ -1.38
RNF43-207ENST00000583753 PRAC1Q96KF2 57 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms