RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	C20orf202	A1L168	122 aa		7.98	□□□□□ -1.13
SREBF1-222	ENST00000583732	TRAV13-2	A0A0B4J235	113 aa		7.97	□□□□□ -1.13
SREBF1-222	ENST00000583732		Q6ZVH6	145 aa		7.97	□□□□□ -1.13
SREBF1-222	ENST00000583732		Q6Q795	121 aa		7.95	□□□□□ -1.14
SREBF1-222	ENST00000583732		Q6ZQY7	126 aa		7.93	□□□□□ -1.14
SREBF1-222	ENST00000583732	OBSCN-AS1	Q96MR7	158 aa		7.92	□□□□□ -1.14
SREBF1-222	ENST00000583732	TRBV7-7	A0A0K0K1E9	115 aa		7.91	□□□□□ -1.14
SREBF1-222	ENST00000583732	VAMP3	Q15836	100 aa		7.91	□□□□□ -1.14
SREBF1-222	ENST00000583732	COA6	Q5JTJ3	125 aa	Known RBP	7.91	□□□□□ -1.14
SREBF1-222	ENST00000583732	IGFL1	Q6UW32	110 aa		7.91	□□□□□ -1.14
SREBF1-222	ENST00000583732	LINC00575	Q6W349	94 aa		7.91	□□□□□ -1.14
SREBF1-222	ENST00000583732	CLEC2B	Q92478	149 aa		7.91	□□□□□ -1.14
SREBF1-222	ENST00000583732	hADV29S1	A0JD25	119 aa		7.89	□□□□□ -1.15
SREBF1-222	ENST00000583732		Q6JHZ5	121 aa		7.89	□□□□□ -1.15
SREBF1-222	ENST00000583732	ATP11AUN	Q6ZP68	121 aa		7.89	□□□□□ -1.15
SREBF1-222	ENST00000583732	OCIAD2	Q56VL3	154 aa		7.86	□□□□□ -1.15
SREBF1-222	ENST00000583732		Q75L30	129 aa		7.86	□□□□□ -1.15
SREBF1-222	ENST00000583732	C12orf57	Q99622	126 aa		7.84	□□□□□ -1.15
SREBF1-222	ENST00000583732		H3BUT2	72 aa		7.83	□□□□□ -1.16
SREBF1-222	ENST00000583732	S100A6	P06703	90 aa		7.83	□□□□□ -1.16
SREBF1-222	ENST00000583732		Q96NJ1	140 aa		7.83	□□□□□ -1.16
SREBF1-222	ENST00000583732	LST1	O00453	97 aa		7.82	□□□□□ -1.16
SREBF1-222	ENST00000583732	SNRPE	P62304	92 aa	Known RBP	7.82	□□□□□ -1.16
SREBF1-222	ENST00000583732	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	7.81	□□□□□ -1.16
SREBF1-222	ENST00000583732	SNHG12	Q9BXW3	62 aa		7.8	□□□□□ -1.16
SREBF1-222	ENST00000583732	HSBP1L1	C9JCN9	74 aa		7.78	□□□□□ -1.16
SREBF1-222	ENST00000583732	BVES-AS1	Q5T3Y7	98 aa		7.77	□□□□□ -1.17
SREBF1-222	ENST00000583732	PPDPFL	Q8WWR9	84 aa		7.77	□□□□□ -1.17
SREBF1-222	ENST00000583732	HIST3H2BB	Q8N257	126 aa		7.76	□□□□□ -1.17
SREBF1-222	ENST00000583732	SS18L2	Q9UHA2	77 aa		7.75	□□□□□ -1.17
SREBF1-222	ENST00000583732	TMA7	Q9Y2S6	64 aa	Known RBP	7.75	□□□□□ -1.17
SREBF1-222	ENST00000583732	SCGB1D1	O95968	90 aa		7.74	□□□□□ -1.17
SREBF1-222	ENST00000583732	S100A2	P29034	98 aa		7.74	□□□□□ -1.17
SREBF1-222	ENST00000583732	HIST1H4G	Q99525	98 aa		7.74	□□□□□ -1.17
SREBF1-222	ENST00000583732	C20orf166-AS1	Q96NR2	134 aa		7.73	□□□□□ -1.17
SREBF1-222	ENST00000583732	HIST1H2BL	Q99880	126 aa		7.73	□□□□□ -1.17
SREBF1-222	ENST00000583732	USH2A	O75445	5202 aa		7.73	□□□□□ -1.17
SREBF1-222	ENST00000583732	TRBV20-1	A0A075B6N2	111 aa		7.72	□□□□□ -1.17
SREBF1-222	ENST00000583732		A8MUU9	505 aa		7.72	□□□□□ -1.17
SREBF1-222	ENST00000583732	CFC1	P0CG37	223 aa		7.72	□□□□□ -1.17
SREBF1-222	ENST00000583732	KRTAP9-8	Q9BYQ0	159 aa		7.72	□□□□□ -1.17
SREBF1-222	ENST00000583732	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	7.71	□□□□□ -1.18
SREBF1-222	ENST00000583732	DSCR10	P59022	87 aa		7.71	□□□□□ -1.18
SREBF1-222	ENST00000583732		A0A087WSZ3	146 aa		7.7	□□□□□ -1.18
SREBF1-222	ENST00000583732	KRTAP9-7	A8MTY7	169 aa		7.69	□□□□□ -1.18
SREBF1-222	ENST00000583732	TEN1	Q86WV5	123 aa		7.69	□□□□□ -1.18
SREBF1-222	ENST00000583732	SSPO	A2VEC9	5147 aa		7.69	□□□□□ -1.18
SREBF1-222	ENST00000583732	NDUFV3	P56181	108 aa	Known RBP	7.68	□□□□□ -1.18
SREBF1-222	ENST00000583732	FAM218A	Q96MZ4	157 aa		7.68	□□□□□ -1.18
SREBF1-222	ENST00000583732	RAB37	Q96AX2	223 aa		7.67	□□□□□ -1.18
SREBF1-222	ENST00000583732	SIGMAR1	Q99720	223 aa		7.67	□□□□□ -1.18
SREBF1-222	ENST00000583732	FAM236D	A0A1B0GTK5	79 aa		7.66	□□□□□ -1.18
SREBF1-222	ENST00000583732	FAM236C	P0DP71	79 aa		7.66	□□□□□ -1.18
SREBF1-222	ENST00000583732	SNCG	O76070	127 aa		7.65	□□□□□ -1.18
SREBF1-222	ENST00000583732		H3BMG7	143 aa		7.64	□□□□□ -1.19
SREBF1-222	ENST00000583732	COX8A	P10176	69 aa		7.64	□□□□□ -1.19
SREBF1-222	ENST00000583732	KRTAP16-1	A8MUX0	517 aa		7.62	□□□□□ -1.19
SREBF1-222	ENST00000583732		H0YGX0	51 aa		7.62	□□□□□ -1.19
SREBF1-222	ENST00000583732	MT2A	P02795	61 aa		7.62	□□□□□ -1.19
SREBF1-222	ENST00000583732	FABP2	P12104	132 aa		7.62	□□□□□ -1.19
SREBF1-222	ENST00000583732	LOC105371267	A0A1B0GV96	52 aa		7.6	□□□□□ -1.19
SREBF1-222	ENST00000583732		A0A1W2PNM2	257 aa		7.6	□□□□□ -1.19
SREBF1-222	ENST00000583732		A0A0B4J2C4	111 aa		7.59	□□□□□ -1.19
SREBF1-222	ENST00000583732		A0A1B0GV72	72 aa		7.59	□□□□□ -1.19
SREBF1-222	ENST00000583732	LINC00313	P59037	77 aa		7.59	□□□□□ -1.19
SREBF1-222	ENST00000583732	C14orf144	Q96I85	54 aa		7.59	□□□□□ -1.19
SREBF1-222	ENST00000583732	DLEU1	O43261	78 aa		7.58	□□□□□ -1.2
SREBF1-222	ENST00000583732	IGKV4-1	P06312	121 aa		7.58	□□□□□ -1.2
SREBF1-222	ENST00000583732	MT1F	P04733	61 aa		7.56	□□□□□ -1.2
SREBF1-222	ENST00000583732	SMIM6	P0DI80	62 aa		7.56	□□□□□ -1.2
SREBF1-222	ENST00000583732	HRES1	P13985	223 aa		7.55	□□□□□ -1.2
SREBF1-222	ENST00000583732	DEFB116	Q30KQ4	102 aa		7.55	□□□□□ -1.2
SREBF1-222	ENST00000583732	PYY3	Q5JQD4	70 aa		7.55	□□□□□ -1.2
SREBF1-222	ENST00000583732	NOTCH2NL	Q7Z3S9	236 aa		7.55	□□□□□ -1.2
SREBF1-222	ENST00000583732	RBM12B-AS1	Q9P1G2	102 aa		7.55	□□□□□ -1.2
SREBF1-222	ENST00000583732	PAM16	Q9Y3D7	125 aa		7.55	□□□□□ -1.2
SREBF1-222	ENST00000583732	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	7.54	□□□□□ -1.2
SREBF1-222	ENST00000583732		A0A1B0GX51	115 aa		7.54	□□□□□ -1.2
SREBF1-222	ENST00000583732	GHRH	P01286	108 aa		7.54	□□□□□ -1.2
SREBF1-222	ENST00000583732	C2orf91	Q6ZV80	131 aa		7.54	□□□□□ -1.2
SREBF1-222	ENST00000583732	HIGD1B	Q9P298	99 aa		7.54	□□□□□ -1.2
SREBF1-222	ENST00000583732	LCE2B	O14633	110 aa		7.53	□□□□□ -1.2
SREBF1-222	ENST00000583732	SPATA45	Q537H7	98 aa		7.53	□□□□□ -1.2
SREBF1-222	ENST00000583732	KRTAP19-1	Q8IUB9	90 aa		7.53	□□□□□ -1.2
SREBF1-222	ENST00000583732	ANKRD29	Q8N6D5	301 aa		7.53	□□□□□ -1.2
SREBF1-222	ENST00000583732	KRTAP10-10	P60014	251 aa		7.52	□□□□□ -1.21
SREBF1-222	ENST00000583732	PRO1854	Q9UHT4	67 aa		7.52	□□□□□ -1.21
SREBF1-222	ENST00000583732	IGHV6-1	A0A0B4J1U7	121 aa		7.51	□□□□□ -1.21
SREBF1-222	ENST00000583732	TRIAP1	O43715	76 aa		7.51	□□□□□ -1.21
SREBF1-222	ENST00000583732	CEND1	Q8N111	149 aa		7.51	□□□□□ -1.21
SREBF1-222	ENST00000583732	MPLKIP	Q8TAP9	179 aa		7.51	□□□□□ -1.21
SREBF1-222	ENST00000583732	TRBV7-4	A0A0J9YYF1	115 aa		7.5	□□□□□ -1.21
SREBF1-222	ENST00000583732	DNAL4	O96015	105 aa		7.49	□□□□□ -1.21
SREBF1-222	ENST00000583732	TMEM238L	A0A1B0GVL6	79 aa		7.48	□□□□□ -1.21
SREBF1-222	ENST00000583732		A6NJY4	79 aa		7.48	□□□□□ -1.21
SREBF1-222	ENST00000583732	FXYD2	P54710	66 aa		7.48	□□□□□ -1.21
SREBF1-222	ENST00000583732	VAMP8	Q9BV40	100 aa		7.48	□□□□□ -1.21
SREBF1-222	ENST00000583732	KRTAP9-3	Q9BYQ3	159 aa		7.48	□□□□□ -1.21
SREBF1-222	ENST00000583732	ORMDL1	Q9P0S3	153 aa		7.48	□□□□□ -1.21
SREBF1-222	ENST00000583732	TRAC	P01848	142 aa		7.46	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 215.7 ms