RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 TEX49A0A1B0GTD5 131 aa9.78□□□□□ -0.84
CDK5RAP3-228ENST00000583363 H3BMG7 143 aa9.78□□□□□ -0.84
CDK5RAP3-228ENST00000583363 LINC00483Q53H64 154 aa9.78□□□□□ -0.84
CDK5RAP3-228ENST00000583363 KRTAP1-4P0C5Y4 121 aa9.77□□□□□ -0.85
CDK5RAP3-228ENST00000583363 ORMDL1Q9P0S3 153 aa9.77□□□□□ -0.85
CDK5RAP3-228ENST00000583363 GHRHP01286 108 aa9.76□□□□□ -0.85
CDK5RAP3-228ENST00000583363 ANAPC11Q9NYG5 84 aa9.76□□□□□ -0.85
CDK5RAP3-228ENST00000583363 H3BQ85 93 aa9.75□□□□□ -0.85
CDK5RAP3-228ENST00000583363 BAALC-AS2P0C853 105 aa9.75□□□□□ -0.85
CDK5RAP3-228ENST00000583363 GTF2H5Q6ZYL4 71 aa9.75□□□□□ -0.85
CDK5RAP3-228ENST00000583363 PPDPFLQ8WWR9 84 aa9.75□□□□□ -0.85
CDK5RAP3-228ENST00000583363 SMIM29Q86T20 159 aa9.74□□□□□ -0.85
CDK5RAP3-228ENST00000583363 C9JAW5 83 aa9.73□□□□□ -0.85
CDK5RAP3-228ENST00000583363 TMEM256-PLSCR3K7ERE1 68 aa9.73□□□□□ -0.85
CDK5RAP3-228ENST00000583363 FAM229BQ4G0N7 80 aa9.72□□□□□ -0.85
CDK5RAP3-228ENST00000583363 OXTP01178 125 aa9.7□□□□□ -0.86
CDK5RAP3-228ENST00000583363 LAMTOR3Q9UHA4 124 aa9.7□□□□□ -0.86
CDK5RAP3-228ENST00000583363 UBE2V1Q13404 147 aa9.69□□□□□ -0.86
CDK5RAP3-228ENST00000583363 C3orf22Q8N5N4 141 aa9.69□□□□□ -0.86
CDK5RAP3-228ENST00000583363 A0A087X002 238 aa9.68□□□□□ -0.86
CDK5RAP3-228ENST00000583363 CRYGAP11844 174 aa9.68□□□□□ -0.86
CDK5RAP3-228ENST00000583363 NDUFV3P56181 108 aaKnown RBP9.68□□□□□ -0.86
CDK5RAP3-228ENST00000583363 MTURNQ8N3F0 131 aa9.68□□□□□ -0.86
CDK5RAP3-228ENST00000583363 PRO0461Q9UI25 63 aa9.68□□□□□ -0.86
CDK5RAP3-228ENST00000583363 H3BT86 120 aa9.67□□□□□ -0.86
CDK5RAP3-228ENST00000583363 SMCPP49901 116 aaPredicted RBP9.66□□□□□ -0.86
CDK5RAP3-228ENST00000583363 ANKRD29Q8N6D5 301 aa9.66□□□□□ -0.86
CDK5RAP3-228ENST00000583363 LINC01600Q96MT4 127 aa9.66□□□□□ -0.86
CDK5RAP3-228ENST00000583363 KRTAP13-2Q52LG2 175 aa9.65□□□□□ -0.86
CDK5RAP3-228ENST00000583363 PRR26Q8N8Z3 221 aa9.65□□□□□ -0.86
CDK5RAP3-228ENST00000583363 IGLV9-49A0A0B4J1Y8 123 aa9.64□□□□□ -0.87
CDK5RAP3-228ENST00000583363 F8W1H4 67 aa9.63□□□□□ -0.87
CDK5RAP3-228ENST00000583363 IGLV8-61A0A075B6I0 122 aa9.62□□□□□ -0.87
CDK5RAP3-228ENST00000583363 F8WEM9 126 aa9.62□□□□□ -0.87
CDK5RAP3-228ENST00000583363 SSBP3-AS1Q7Z2R9 100 aa9.61□□□□□ -0.87
CDK5RAP3-228ENST00000583363 KRTAP10-8P60410 259 aa9.6□□□□□ -0.87
CDK5RAP3-228ENST00000583363 MOBPQ13875 183 aa9.6□□□□□ -0.87
CDK5RAP3-228ENST00000583363 C9orf153Q5TBE3 101 aa9.6□□□□□ -0.87
CDK5RAP3-228ENST00000583363 TNXBP22105 4242 aa9.6□□□□□ -0.87
CDK5RAP3-228ENST00000583363 Q8NBF4 154 aa9.59□□□□□ -0.87
CDK5RAP3-228ENST00000583363 TYMSOSQ8TAI1 123 aa9.59□□□□□ -0.87
CDK5RAP3-228ENST00000583363 OBSCN-AS1Q96MR7 158 aa9.58□□□□□ -0.88
CDK5RAP3-228ENST00000583363 JMJD7-PLA2G4BH0Y9G9 81 aa9.57□□□□□ -0.88
CDK5RAP3-228ENST00000583363 RBM3P98179 157 aaKnown RBP9.57□□□□□ -0.88
CDK5RAP3-228ENST00000583363 A0A1B0GV72 72 aa9.56□□□□□ -0.88
CDK5RAP3-228ENST00000583363 Q6JHZ5 121 aa9.56□□□□□ -0.88
CDK5RAP3-228ENST00000583363 MT1HL1P0DM35 61 aa9.55□□□□□ -0.88
CDK5RAP3-228ENST00000583363 A0A0G2JQZ4 141 aa9.54□□□□□ -0.88
CDK5RAP3-228ENST00000583363 IGFL1Q6UW32 110 aa9.54□□□□□ -0.88
CDK5RAP3-228ENST00000583363 TRBV7-4A0A0J9YYF1 115 aa9.52□□□□□ -0.89
CDK5RAP3-228ENST00000583363 DSCR8Q96T75 97 aa9.52□□□□□ -0.89
CDK5RAP3-228ENST00000583363 LRP2P98164 4655 aa9.51□□□□□ -0.89
CDK5RAP3-228ENST00000583363 ETDBQ3ZM63 59 aa9.51□□□□□ -0.89
CDK5RAP3-228ENST00000583363 TEN1Q86WV5 123 aa9.5□□□□□ -0.89
CDK5RAP3-228ENST00000583363 C14orf132Q9NPU4 83 aa9.49□□□□□ -0.89
CDK5RAP3-228ENST00000583363 RNF213Q63HN8 5207 aa9.48□□□□□ -0.89
CDK5RAP3-228ENST00000583363 LOC110117498A0A087WWA1 95 aa9.48□□□□□ -0.89
CDK5RAP3-228ENST00000583363 LINC00304Q8N9R0 145 aa9.48□□□□□ -0.89
CDK5RAP3-228ENST00000583363 A0A1W2PNM2 257 aa9.47□□□□□ -0.89
CDK5RAP3-228ENST00000583363 PDE6GP18545 87 aa9.47□□□□□ -0.89
CDK5RAP3-228ENST00000583363 CD164Q04900 197 aa9.47□□□□□ -0.89
CDK5RAP3-228ENST00000583363 Q6ZQT0 140 aa9.47□□□□□ -0.89
CDK5RAP3-228ENST00000583363 C4orf48Q5BLP8 95 aa9.46□□□□□ -0.9
CDK5RAP3-228ENST00000583363 SPAG11AQ6PDA7 123 aa9.46□□□□□ -0.9
CDK5RAP3-228ENST00000583363 Q6Q795 121 aa9.46□□□□□ -0.9
CDK5RAP3-228ENST00000583363 HRCT1Q6UXD1 115 aa9.45□□□□□ -0.9
CDK5RAP3-228ENST00000583363 CCKP06307 115 aa9.44□□□□□ -0.9
CDK5RAP3-228ENST00000583363 SPINK1P00995 79 aa9.43□□□□□ -0.9
CDK5RAP3-228ENST00000583363 TRBV7-7A0A0K0K1E9 115 aa9.41□□□□□ -0.9
CDK5RAP3-228ENST00000583363 C21orf62-AS1Q17RA5 79 aa9.41□□□□□ -0.9
CDK5RAP3-228ENST00000583363 VPS25Q9BRG1 176 aa9.4□□□□□ -0.9
CDK5RAP3-228ENST00000583363 RPS29P62273 56 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP3-228ENST00000583363 A0A1B0GW54 56 aa9.37□□□□□ -0.91
CDK5RAP3-228ENST00000583363 Q5XG85 94 aa9.36□□□□□ -0.91
CDK5RAP3-228ENST00000583363 A0A087WSZ3 146 aa9.35□□□□□ -0.91
CDK5RAP3-228ENST00000583363 LIMD2Q9BT23 127 aa9.33□□□□□ -0.92
CDK5RAP3-228ENST00000583363 ASB16-AS1Q495Z4 193 aa9.3□□□□□ -0.92
CDK5RAP3-228ENST00000583363 SS18L2Q9UHA2 77 aa9.3□□□□□ -0.92
CDK5RAP3-228ENST00000583363 J3QR89 54 aa9.25□□□□□ -0.93
CDK5RAP3-228ENST00000583363 C1orf195Q5TG92 126 aa9.25□□□□□ -0.93
CDK5RAP3-228ENST00000583363 LINC00846Q9NV44 126 aa9.25□□□□□ -0.93
CDK5RAP3-228ENST00000583363 ACYP1P07311 99 aa9.24□□□□□ -0.93
CDK5RAP3-228ENST00000583363 NREPQ16612 68 aa9.24□□□□□ -0.93
CDK5RAP3-228ENST00000583363 LINC00472Q9H8W2 130 aa9.24□□□□□ -0.93
CDK5RAP3-228ENST00000583363 FAM240AA0A1B0GVK7 77 aa9.23□□□□□ -0.93
CDK5RAP3-228ENST00000583363 K7ERU9 68 aa9.23□□□□□ -0.93
CDK5RAP3-228ENST00000583363 Q96NJ1 140 aa9.23□□□□□ -0.93
CDK5RAP3-228ENST00000583363 RETNLBQ9BQ08 111 aa9.21□□□□□ -0.94
CDK5RAP3-228ENST00000583363 LPAP08519 4548 aa9.2□□□□□ -0.94
CDK5RAP3-228ENST00000583363 Q6ZVQ6 151 aa9.2□□□□□ -0.94
CDK5RAP3-228ENST00000583363 DEFB116Q30KQ4 102 aa9.18□□□□□ -0.94
CDK5RAP3-228ENST00000583363 UBL5Q9BZL1 73 aa9.18□□□□□ -0.94
CDK5RAP3-228ENST00000583363 FP248Q71RG6 208 aaPredicted RBP9.16□□□□□ -0.94
CDK5RAP3-228ENST00000583363 IGKV4-1P06312 121 aa9.15□□□□□ -0.94
CDK5RAP3-228ENST00000583363 J3KT08 172 aa9.14□□□□□ -0.95
CDK5RAP3-228ENST00000583363 PRR4Q16378 134 aa9.12□□□□□ -0.95
CDK5RAP3-228ENST00000583363 SIGMAR1Q99720 223 aa9.12□□□□□ -0.95
CDK5RAP3-228ENST00000583363 IGLV7-46A0A075B6I9 117 aa9.11□□□□□ -0.95
CDK5RAP3-228ENST00000583363 BPY2O14599 106 aa9.11□□□□□ -0.95
CDK5RAP3-228ENST00000583363 DSCR10P59022 87 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms