RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.12□□□□□ -0.15
CCDC47-204ENST00000582252 ATOX1O00244 68 aa14.11□□□□□ -0.15
CCDC47-204ENST00000582252 BCE1O60756 84 aa14.11□□□□□ -0.15
CCDC47-204ENST00000582252 KRTAP11-1Q8IUC1 163 aa14.1□□□□□ -0.15
CCDC47-204ENST00000582252 IGLV5-52A0A0A0MRZ9 124 aa14.1□□□□□ -0.15
CCDC47-204ENST00000582252 SMIM29Q86T20 159 aa14.08□□□□□ -0.16
CCDC47-204ENST00000582252 A0A087WVE0 104 aa14.07□□□□□ -0.16
CCDC47-204ENST00000582252 NREPQ16612 68 aa14.07□□□□□ -0.16
CCDC47-204ENST00000582252 Q8NBF4 154 aa14.06□□□□□ -0.16
CCDC47-204ENST00000582252 DNAH5Q8TE73 4624 aa14.05□□□□□ -0.16
CCDC47-204ENST00000582252 LINC00336Q6ZUF6 198 aa14.04□□□□□ -0.16
CCDC47-204ENST00000582252 SPRR1BP22528 89 aa14.04□□□□□ -0.16
CCDC47-204ENST00000582252 PKD1P98161 4303 aa14.03□□□□□ -0.16
CCDC47-204ENST00000582252 IGLV8-61A0A075B6I0 122 aa14.02□□□□□ -0.16
CCDC47-204ENST00000582252 A0A1W2PNM2 257 aa14.02□□□□□ -0.16
CCDC47-204ENST00000582252 SPRR4Q96PI1 79 aa14.02□□□□□ -0.16
CCDC47-204ENST00000582252 PLAC8Q9NZF1 115 aa14.02□□□□□ -0.16
CCDC47-204ENST00000582252 KRTAP13-1Q8IUC0 172 aa14□□□□□ -0.17
CCDC47-204ENST00000582252 CCDC179H3BU77 68 aa13.97□□□□□ -0.17
CCDC47-204ENST00000582252 KRTAP10-2P60368 255 aa13.95□□□□□ -0.18
CCDC47-204ENST00000582252 UQCRQO14949 82 aa13.95□□□□□ -0.18
CCDC47-204ENST00000582252 CRYGAP11844 174 aa13.95□□□□□ -0.18
CCDC47-204ENST00000582252 IGFL1Q6UW32 110 aa13.95□□□□□ -0.18
CCDC47-204ENST00000582252 BPY2O14599 106 aa13.94□□□□□ -0.18
CCDC47-204ENST00000582252 SCXQ7RTU7 201 aa13.93□□□□□ -0.18
CCDC47-204ENST00000582252 COX7CP15954 63 aa13.93□□□□□ -0.18
CCDC47-204ENST00000582252 DNAH8Q96JB1 4490 aa13.91□□□□□ -0.18
CCDC47-204ENST00000582252 ZNF706Q9Y5V0 76 aaPredicted RBP13.9□□□□□ -0.18
CCDC47-204ENST00000582252 SERP2Q8N6R1 65 aa13.9□□□□□ -0.18
CCDC47-204ENST00000582252 PSORS1C2Q9UIG4 136 aa13.89□□□□□ -0.19
CCDC47-204ENST00000582252 RYR3Q15413 4870 aa13.89□□□□□ -0.19
CCDC47-204ENST00000582252 PKHD1P08F94 4074 aa13.87□□□□□ -0.19
CCDC47-204ENST00000582252 SMIM20Q8N5G0 67 aa13.86□□□□□ -0.19
CCDC47-204ENST00000582252 C9orf153Q5TBE3 101 aa13.84□□□□□ -0.19
CCDC47-204ENST00000582252 A0A1B0GVY2 172 aa13.82□□□□□ -0.2
CCDC47-204ENST00000582252 IGKV4-1P06312 121 aa13.82□□□□□ -0.2
CCDC47-204ENST00000582252 ZNF861PO60384 105 aa13.81□□□□□ -0.2
CCDC47-204ENST00000582252 LINC00483Q53H64 154 aa13.81□□□□□ -0.2
CCDC47-204ENST00000582252 RPL37AP61513 92 aaKnown RBP13.78□□□□□ -0.2
CCDC47-204ENST00000582252 A0A087WSZ3 146 aa13.78□□□□□ -0.2
CCDC47-204ENST00000582252 A0A0G2JQZ4 141 aa13.78□□□□□ -0.2
CCDC47-204ENST00000582252 KRTAP10-1P60331 282 aa13.78□□□□□ -0.2
CCDC47-204ENST00000582252 LRP1BQ9NZR2 4599 aa13.78□□□□□ -0.2
CCDC47-204ENST00000582252 TRAV7A0A075B6U4 112 aa13.76□□□□□ -0.21
CCDC47-204ENST00000582252 Q6ZSA8 131 aa13.76□□□□□ -0.21
CCDC47-204ENST00000582252 Q8N9L7 120 aa13.76□□□□□ -0.21
CCDC47-204ENST00000582252 DYNC1H1Q14204 4646 aaKnown RBP13.75□□□□□ -0.21
CCDC47-204ENST00000582252 IGLV7-43P04211 117 aa13.73□□□□□ -0.21
CCDC47-204ENST00000582252 CIRBP-AS1Q8TBR5 109 aa13.72□□□□□ -0.21
CCDC47-204ENST00000582252 FAM30AQ9NZY2 134 aa13.72□□□□□ -0.21
CCDC47-204ENST00000582252 IGLV9-49A0A0B4J1Y8 123 aa13.7□□□□□ -0.22
CCDC47-204ENST00000582252 DSCR10P59022 87 aa13.7□□□□□ -0.22
CCDC47-204ENST00000582252 K7EQZ3 153 aa13.63□□□□□ -0.23
CCDC47-204ENST00000582252 SS18L2Q9UHA2 77 aa13.61□□□□□ -0.23
CCDC47-204ENST00000582252 MOBPQ13875 183 aa13.6□□□□□ -0.23
CCDC47-204ENST00000582252 APOBP04114 4563 aaKnown RBP13.59□□□□□ -0.23
CCDC47-204ENST00000582252 J3KT08 172 aa13.59□□□□□ -0.23
CCDC47-204ENST00000582252 DEFB116Q30KQ4 102 aa13.57□□□□□ -0.24
CCDC47-204ENST00000582252 C20orf197Q8N268 126 aa13.57□□□□□ -0.24
CCDC47-204ENST00000582252 LINC00472Q9H8W2 130 aa13.57□□□□□ -0.24
CCDC47-204ENST00000582252 HCG22E2RYF7 251 aa13.56□□□□□ -0.24
CCDC47-204ENST00000582252 OCR1Q9BZK8 76 aa13.53□□□□□ -0.24
CCDC47-204ENST00000582252 SRRM2Q9UQ35 2752 aaKnown RBP13.53□□□□□ -0.24
CCDC47-204ENST00000582252 A8MWP4 228 aa13.53□□□□□ -0.24
CCDC47-204ENST00000582252 ANAPC11Q9NYG5 84 aa13.53□□□□□ -0.24
CCDC47-204ENST00000582252 TMEM258P61165 79 aa13.5□□□□□ -0.25
CCDC47-204ENST00000582252 KLKP1Q107X0 134 aa13.5□□□□□ -0.25
CCDC47-204ENST00000582252 PRR15Q8IV56 129 aa13.49□□□□□ -0.25
CCDC47-204ENST00000582252 HRCT1Q6UXD1 115 aa13.48□□□□□ -0.25
CCDC47-204ENST00000582252 NDUFB1O75438 58 aa13.47□□□□□ -0.25
CCDC47-204ENST00000582252 SSBP3-AS1Q7Z2R9 100 aa13.47□□□□□ -0.25
CCDC47-204ENST00000582252 CYSTM1Q9H1C7 97 aa13.47□□□□□ -0.25
CCDC47-204ENST00000582252 VPS13BQ7Z7G8 4022 aa13.46□□□□□ -0.25
CCDC47-204ENST00000582252 CD164Q04900 197 aa13.44□□□□□ -0.26
CCDC47-204ENST00000582252 TMEM254Q8TBM7 123 aa13.43□□□□□ -0.26
CCDC47-204ENST00000582252 NDUFC1O43677 76 aa13.42□□□□□ -0.26
CCDC47-204ENST00000582252 FAM229BQ4G0N7 80 aa13.42□□□□□ -0.26
CCDC47-204ENST00000582252 Q96NJ1 140 aa13.42□□□□□ -0.26
CCDC47-204ENST00000582252 WFDC13Q8IUB5 93 aa13.41□□□□□ -0.26
CCDC47-204ENST00000582252 SNURFQ9Y675 71 aa13.39□□□□□ -0.27
CCDC47-204ENST00000582252 CASC2Q6XLA1 102 aa13.39□□□□□ -0.27
CCDC47-204ENST00000582252 EPPK1P58107 5090 aaKnown RBP13.38□□□□□ -0.27
CCDC47-204ENST00000582252 CDK2AP2O75956 126 aa13.37□□□□□ -0.27
CCDC47-204ENST00000582252 FAT1Q14517 4588 aa13.36□□□□□ -0.27
CCDC47-204ENST00000582252 KRTAP29-1A8MX34 341 aaPredicted RBP13.36□□□□□ -0.27
CCDC47-204ENST00000582252 H7BZZ5 65 aa13.34□□□□□ -0.27
CCDC47-204ENST00000582252 A0A0U1RQV1 116 aa13.33□□□□□ -0.27
CCDC47-204ENST00000582252 C5orf47Q569G3 176 aa13.33□□□□□ -0.27
CCDC47-204ENST00000582252 HSPG2P98160 4391 aa13.33□□□□□ -0.28
CCDC47-204ENST00000582252 SMR3BP02814 79 aaPredicted RBP13.32□□□□□ -0.28
CCDC47-204ENST00000582252 MMP24-AS1A0A0U1RRL7 71 aa13.3□□□□□ -0.28
CCDC47-204ENST00000582252 RYR1P21817 5038 aa13.29□□□□□ -0.28
CCDC47-204ENST00000582252 FAM236DA0A1B0GTK5 79 aa13.28□□□□□ -0.28
CCDC47-204ENST00000582252 A0A1B0GVX0 72 aa13.28□□□□□ -0.28
CCDC47-204ENST00000582252 FAM236CP0DP71 79 aa13.28□□□□□ -0.28
CCDC47-204ENST00000582252 ASB16-AS1Q495Z4 193 aa13.28□□□□□ -0.28
CCDC47-204ENST00000582252 hDV103S1A0JD37 113 aa13.27□□□□□ -0.28
CCDC47-204ENST00000582252 A0A087X002 238 aa13.27□□□□□ -0.29
CCDC47-204ENST00000582252 KRTAP13-2Q52LG2 175 aa13.26□□□□□ -0.29
CCDC47-204ENST00000582252 C8orf17Q9NRJ1 99 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms