RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 DNAH10Q8IVF4 4471 aa8.61□□□□□ -1.03
RNF43-205ENST00000581868 WFDC13Q8IUB5 93 aa8.61□□□□□ -1.03
RNF43-205ENST00000581868 C16orf90A8MZG2 172 aa8.61□□□□□ -1.03
RNF43-205ENST00000581868 SRRM2Q9UQ35 2752 aaKnown RBP8.61□□□□□ -1.03
RNF43-205ENST00000581868 K7EIL1 84 aa8.6□□□□□ -1.03
RNF43-205ENST00000581868 LRCOL1A6NCL2 159 aa8.6□□□□□ -1.03
RNF43-205ENST00000581868 RPL37AP61513 92 aaKnown RBP8.6□□□□□ -1.03
RNF43-205ENST00000581868 UBE2AP49459 152 aa8.59□□□□□ -1.03
RNF43-205ENST00000581868 CHTF8P0CG12 524 aa8.59□□□□□ -1.03
RNF43-205ENST00000581868 PKIGQ9Y2B9 76 aa8.59□□□□□ -1.03
RNF43-205ENST00000581868 HUWE1Q7Z6Z7 4374 aaKnown RBP8.59□□□□□ -1.03
RNF43-205ENST00000581868 LYSTQ99698 3801 aa8.59□□□□□ -1.03
RNF43-205ENST00000581868 PRR4Q16378 134 aa8.58□□□□□ -1.04
RNF43-205ENST00000581868 PHF5AQ7RTV0 110 aaKnown RBP8.58□□□□□ -1.04
RNF43-205ENST00000581868 ZCCHC13Q8WW36 166 aaKnown RBP8.58□□□□□ -1.04
RNF43-205ENST00000581868 KRTAP11-1Q8IUC1 163 aa8.57□□□□□ -1.04
RNF43-205ENST00000581868 BRK1Q8WUW1 75 aa8.56□□□□□ -1.04
RNF43-205ENST00000581868 CNBPP62633 177 aaKnown RBP8.56□□□□□ -1.04
RNF43-205ENST00000581868 hDV103S1A0JD37 113 aa8.55□□□□□ -1.04
RNF43-205ENST00000581868 UBE2DNLQ8IWF7 75 aa8.55□□□□□ -1.04
RNF43-205ENST00000581868 C1orf64Q8NEQ6 169 aa8.55□□□□□ -1.04
RNF43-205ENST00000581868 IGLV8-61A0A075B6I0 122 aa8.54□□□□□ -1.04
RNF43-205ENST00000581868 C1orf195Q5TG92 126 aa8.54□□□□□ -1.04
RNF43-205ENST00000581868 CSMD3Q7Z407 3707 aa8.53□□□□□ -1.04
RNF43-205ENST00000581868 STAB2Q8WWQ8 2551 aa8.53□□□□□ -1.04
RNF43-205ENST00000581868 MGAM2Q2M2H8 2515 aa8.52□□□□□ -1.05
RNF43-205ENST00000581868 DNAH9Q9NYC9 4486 aa8.51□□□□□ -1.05
RNF43-205ENST00000581868 MP68P56378 58 aa8.5□□□□□ -1.05
RNF43-205ENST00000581868 LINC00208Q96KT6 92 aa8.5□□□□□ -1.05
RNF43-205ENST00000581868 TENM2Q9NT68 2774 aa8.5□□□□□ -1.05
RNF43-205ENST00000581868 COL7A1Q02388 2944 aa8.49□□□□□ -1.05
RNF43-205ENST00000581868 CASC2Q6XLA1 102 aa8.48□□□□□ -1.05
RNF43-205ENST00000581868 KRTAP29-1A8MX34 341 aaPredicted RBP8.47□□□□□ -1.05
RNF43-205ENST00000581868 C14orf177Q52M58 125 aa8.46□□□□□ -1.05
RNF43-205ENST00000581868 PRR15Q8IV56 129 aa8.46□□□□□ -1.05
RNF43-205ENST00000581868 NDUFB1O75438 58 aa8.45□□□□□ -1.06
RNF43-205ENST00000581868 APLNQ9ULZ1 77 aa8.45□□□□□ -1.06
RNF43-205ENST00000581868 TRAV22A0A0B4J277 110 aa8.45□□□□□ -1.06
RNF43-205ENST00000581868 H0Y9P7 68 aa8.45□□□□□ -1.06
RNF43-205ENST00000581868 SPRR1BP22528 89 aa8.45□□□□□ -1.06
RNF43-205ENST00000581868 B9D2Q9BPU9 175 aa8.44□□□□□ -1.06
RNF43-205ENST00000581868 CYP4F30PQ9H0H9 118 aa8.44□□□□□ -1.06
RNF43-205ENST00000581868 LINC00472Q9H8W2 130 aa8.44□□□□□ -1.06
RNF43-205ENST00000581868 A8MWP4 228 aa8.44□□□□□ -1.06
RNF43-205ENST00000581868 H0Y9J4 135 aa8.44□□□□□ -1.06
RNF43-205ENST00000581868 PANO1I0J062 215 aa8.43□□□□□ -1.06
RNF43-205ENST00000581868 C9orf163Q8N9P6 203 aa8.43□□□□□ -1.06
RNF43-205ENST00000581868 PSPHP1O15172 72 aa8.42□□□□□ -1.06
RNF43-205ENST00000581868 Q1T7F1 81 aa8.41□□□□□ -1.06
RNF43-205ENST00000581868 DNAH7Q8WXX0 4024 aa8.4□□□□□ -1.06
RNF43-205ENST00000581868 IGLV9-49A0A0B4J1Y8 123 aa8.39□□□□□ -1.07
RNF43-205ENST00000581868 NBDYA0A0U1RRE5 68 aa8.36□□□□□ -1.07
RNF43-205ENST00000581868 MMP24-AS1A0A0U1RRL7 71 aa8.35□□□□□ -1.07
RNF43-205ENST00000581868 KRTAP13-1Q8IUC0 172 aa8.35□□□□□ -1.07
RNF43-205ENST00000581868 H3BPC8 53 aa8.34□□□□□ -1.07
RNF43-205ENST00000581868 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.34□□□□□ -1.07
RNF43-205ENST00000581868 MDFIQ99750 246 aa8.33□□□□□ -1.08
RNF43-205ENST00000581868 A8MUN3 132 aa8.32□□□□□ -1.08
RNF43-205ENST00000581868 SPANXA2-OT1Q8N9U9 137 aa8.32□□□□□ -1.08
RNF43-205ENST00000581868 PMAIP1Q13794 54 aa8.31□□□□□ -1.08
RNF43-205ENST00000581868 Q6ZRN7 208 aaPredicted RBP8.31□□□□□ -1.08
RNF43-205ENST00000581868 PLECQ15149 4684 aaKnown RBP8.31□□□□□ -1.08
RNF43-205ENST00000581868 Q96NJ1 140 aa8.3□□□□□ -1.08
RNF43-205ENST00000581868 SPACA4Q8TDM5 124 aa8.29□□□□□ -1.08
RNF43-205ENST00000581868 PCOTHQ58A44 107 aa8.29□□□□□ -1.08
RNF43-205ENST00000581868 ANAPC11Q9NYG5 84 aa8.28□□□□□ -1.08
RNF43-205ENST00000581868 MOBPQ13875 183 aa8.28□□□□□ -1.08
RNF43-205ENST00000581868 IGHV6-1A0A0B4J1U7 121 aa8.27□□□□□ -1.09
RNF43-205ENST00000581868 NDUFS5O43920 106 aa8.26□□□□□ -1.09
RNF43-205ENST00000581868 DYNC2H1Q8NCM8 4307 aaKnown RBP8.25□□□□□ -1.09
RNF43-205ENST00000581868 C8orf17Q9NRJ1 99 aa8.25□□□□□ -1.09
RNF43-205ENST00000581868 Q8N9P0 234 aaPredicted RBP8.24□□□□□ -1.09
RNF43-205ENST00000581868 CD164Q04900 197 aa8.24□□□□□ -1.09
RNF43-205ENST00000581868 NUPR2A6NF83 97 aa8.23□□□□□ -1.09
RNF43-205ENST00000581868 Q5VV11 94 aa8.23□□□□□ -1.09
RNF43-205ENST00000581868 PSORS1C2Q9UIG4 136 aa8.23□□□□□ -1.09
RNF43-205ENST00000581868 LINC00483Q53H64 154 aa8.23□□□□□ -1.09
RNF43-205ENST00000581868 COA5Q86WW8 74 aa8.22□□□□□ -1.09
RNF43-205ENST00000581868 IGLV7-46A0A075B6I9 117 aa8.22□□□□□ -1.09
RNF43-205ENST00000581868 A0A087WTM6 91 aa8.22□□□□□ -1.09
RNF43-205ENST00000581868 CDK2AP2O75956 126 aa8.22□□□□□ -1.09
RNF43-205ENST00000581868 WWC2-AS2Q96NR7 200 aa8.22□□□□□ -1.09
RNF43-205ENST00000581868 TP53AIP1Q9HCN2 124 aa8.22□□□□□ -1.09
RNF43-205ENST00000581868 PRR15LQ9BU68 103 aa8.21□□□□□ -1.09
RNF43-205ENST00000581868 A8MU10 97 aa8.21□□□□□ -1.1
RNF43-205ENST00000581868 ASB16-AS1Q495Z4 193 aa8.21□□□□□ -1.1
RNF43-205ENST00000581868 A0A1B0GVX0 72 aa8.2□□□□□ -1.1
RNF43-205ENST00000581868 ZNF706Q9Y5V0 76 aaPredicted RBP8.2□□□□□ -1.1
RNF43-205ENST00000581868 CHKB-CPT1BH3BT56 60 aa8.2□□□□□ -1.1
RNF43-205ENST00000581868 RTL8CO15255 209 aa8.19□□□□□ -1.1
RNF43-205ENST00000581868 A0A087X002 238 aa8.19□□□□□ -1.1
RNF43-205ENST00000581868 IGLV5-52A0A0A0MRZ9 124 aa8.19□□□□□ -1.1
RNF43-205ENST00000581868 NOTCH2NLQ7Z3S9 236 aa8.19□□□□□ -1.1
RNF43-205ENST00000581868 LIMD2Q9BT23 127 aa8.19□□□□□ -1.1
RNF43-205ENST00000581868 Q6ZR54 194 aa8.16□□□□□ -1.1
RNF43-205ENST00000581868 ZNF861PO60384 105 aa8.16□□□□□ -1.1
RNF43-205ENST00000581868 SPINK6Q6UWN8 80 aa8.16□□□□□ -1.1
RNF43-205ENST00000581868 MRPL34Q9BQ48 92 aaKnown RBP8.16□□□□□ -1.1
RNF43-205ENST00000581868 FRAS1Q86XX4 4008 aa8.16□□□□□ -1.1
RNF43-205ENST00000581868 STARD9Q9P2P6 4700 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms