RNA–Protein interactions for RNA: ENST00000580597.2

RN7SL339P-201, Transcript of RNA, 7SL, cytoplasmic 339, pseudogene, humanhuman

BASIC

Gene RN7SL339P, Length 296 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL339P-201ENST00000580597 KRTAP2-3P0C7H8 128 aa2.12□□□□□ -2.07
RN7SL339P-201ENST00000580597 UBE2D3P61077 147 aa2.12□□□□□ -2.07
RN7SL339P-201ENST00000580597 UBE2D2P62837 147 aa2.12□□□□□ -2.07
RN7SL339P-201ENST00000580597 RPL39P62891 51 aaKnown RBP2.12□□□□□ -2.07
RN7SL339P-201ENST00000580597 CTAG1AP78358 180 aa2.12□□□□□ -2.07
RN7SL339P-201ENST00000580597 AMMECR1LQ6DCA0 310 aa2.12□□□□□ -2.07
RN7SL339P-201ENST00000580597 BOD1L2Q8IYS8 172 aa2.12□□□□□ -2.07
RN7SL339P-201ENST00000580597 RETNLBQ9BQ08 111 aa2.12□□□□□ -2.07
RN7SL339P-201ENST00000580597 C2orf88Q9BSF0 95 aa2.12□□□□□ -2.07
RN7SL339P-201ENST00000580597 TIMM21Q9BVV7 248 aa2.12□□□□□ -2.07
RN7SL339P-201ENST00000580597 KRTAP2-4Q9BYR9 128 aa2.12□□□□□ -2.07
RN7SL339P-201ENST00000580597 CST9LQ9H4G1 147 aa2.12□□□□□ -2.07
RN7SL339P-201ENST00000580597 SPANXA1Q9NS26 97 aa2.12□□□□□ -2.07
RN7SL339P-201ENST00000580597 MRPL35Q9NZE8 188 aaKnown RBP2.12□□□□□ -2.07
RN7SL339P-201ENST00000580597 P0C880 135 aa2.11□□□□□ -2.07
RN7SL339P-201ENST00000580597 FGF6P10767 208 aa2.11□□□□□ -2.07
RN7SL339P-201ENST00000580597 MRPS36P82909 103 aaKnown RBP2.11□□□□□ -2.07
RN7SL339P-201ENST00000580597 AMELXQ99217 191 aa2.11□□□□□ -2.07
RN7SL339P-201ENST00000580597 SNHG12Q9BXW3 62 aa2.11□□□□□ -2.07
RN7SL339P-201ENST00000580597 SND1-IT1Q9HBX3 110 aa2.11□□□□□ -2.07
RN7SL339P-201ENST00000580597 HIGD1BQ9P298 99 aa2.11□□□□□ -2.07
RN7SL339P-201ENST00000580597 UBE2D4Q9Y2X8 147 aa2.11□□□□□ -2.07
RN7SL339P-201ENST00000580597 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.1□□□□□ -2.07
RN7SL339P-201ENST00000580597 GVQW2A0A096LPI5 108 aaPredicted RBP2.1□□□□□ -2.07
RN7SL339P-201ENST00000580597 IGHV1-58A0A0C4DH39 117 aa2.1□□□□□ -2.07
RN7SL339P-201ENST00000580597 MYMXA0A1B0GTQ4 84 aa2.1□□□□□ -2.07
RN7SL339P-201ENST00000580597 TINCRA0A1B0GVN0 87 aa2.1□□□□□ -2.07
RN7SL339P-201ENST00000580597 IGKV2-29A2NJV5 120 aaPredicted RBP2.1□□□□□ -2.07
RN7SL339P-201ENST00000580597 ZNF25P17030 456 aaPredicted RBP2.1□□□□□ -2.07
RN7SL339P-201ENST00000580597 SEC11AP67812 179 aa2.1□□□□□ -2.07
RN7SL339P-201ENST00000580597 HSD52Q0P140 79 aa2.1□□□□□ -2.07
RN7SL339P-201ENST00000580597 TPRXLQ17RH7 258 aa2.1□□□□□ -2.07
RN7SL339P-201ENST00000580597 C9orf116Q5BN46 136 aaPredicted RBP2.1□□□□□ -2.07
RN7SL339P-201ENST00000580597 COL5A1-AS1Q5SY13 56 aa2.1□□□□□ -2.07
RN7SL339P-201ENST00000580597 C2orf91Q6ZV80 131 aa2.1□□□□□ -2.07
RN7SL339P-201ENST00000580597 PHF5AQ7RTV0 110 aaKnown RBP2.1□□□□□ -2.07
RN7SL339P-201ENST00000580597 FAM19A3Q7Z5A8 133 aa2.1□□□□□ -2.07
RN7SL339P-201ENST00000580597 IGKV2D-26A0A0A0MRZ7 120 aa2.09□□□□□ -2.07
RN7SL339P-201ENST00000580597 H3BRM9 83 aa2.09□□□□□ -2.07
RN7SL339P-201ENST00000580597 LEPROTO15243 131 aa2.09□□□□□ -2.07
RN7SL339P-201ENST00000580597 ZNF22P17026 224 aaPredicted RBP2.09□□□□□ -2.07
RN7SL339P-201ENST00000580597 LGALS3P17931 250 aaKnown RBP2.09□□□□□ -2.07
RN7SL339P-201ENST00000580597 XCL1P47992 114 aa2.09□□□□□ -2.07
RN7SL339P-201ENST00000580597 HINT1P49773 126 aaPredicted RBP2.09□□□□□ -2.07
RN7SL339P-201ENST00000580597 HERVK_113P63121 156 aa2.09□□□□□ -2.07
RN7SL339P-201ENST00000580597 BATFQ16520 125 aa2.09□□□□□ -2.07
RN7SL339P-201ENST00000580597 BVES-AS1Q5T3Y7 98 aa2.09□□□□□ -2.07
RN7SL339P-201ENST00000580597 TMEM170BQ5T4T1 132 aa2.09□□□□□ -2.07
RN7SL339P-201ENST00000580597 Q6ZUT4 128 aa2.09□□□□□ -2.07
RN7SL339P-201ENST00000580597 FAM19A5Q7Z5A7 132 aaPredicted RBP2.09□□□□□ -2.07
RN7SL339P-201ENST00000580597 FAM19A1Q7Z5A9 133 aa2.09□□□□□ -2.07
RN7SL339P-201ENST00000580597 OR5A1Q8NGJ0 315 aa2.09□□□□□ -2.07
RN7SL339P-201ENST00000580597 PLEKHB2Q96CS7 222 aa2.09□□□□□ -2.07
RN7SL339P-201ENST00000580597 LINC00526Q96FQ7 95 aa2.09□□□□□ -2.07
RN7SL339P-201ENST00000580597 CDC42SE2Q9NRR3 84 aa2.09□□□□□ -2.07
RN7SL339P-201ENST00000580597 ZNF815PA8K554 130 aa2.08□□□□□ -2.08
RN7SL339P-201ENST00000580597 J3QQQ9 107 aa2.08□□□□□ -2.08
RN7SL339P-201ENST00000580597 CCL25O15444 150 aa2.08□□□□□ -2.08
RN7SL339P-201ENST00000580597 APOMO95445 188 aa2.08□□□□□ -2.08
RN7SL339P-201ENST00000580597 SS18Q15532 418 aa2.08□□□□□ -2.08
RN7SL339P-201ENST00000580597 KRTAP19-6Q3LI70 58 aa2.08□□□□□ -2.08
RN7SL339P-201ENST00000580597 KRTAP26-1Q6PEX3 210 aa2.08□□□□□ -2.08
RN7SL339P-201ENST00000580597 SCGB1D4Q6XE38 83 aa2.08□□□□□ -2.08
RN7SL339P-201ENST00000580597 COX6B2Q6YFQ2 88 aa2.08□□□□□ -2.08
RN7SL339P-201ENST00000580597 TP73-AS1Q9UF72 201 aa2.08□□□□□ -2.08
RN7SL339P-201ENST00000580597 NDUFA12Q9UI09 145 aa2.08□□□□□ -2.08
RN7SL339P-201ENST00000580597 TRAV13-1A0A0B4J241 112 aa2.07□□□□□ -2.08
RN7SL339P-201ENST00000580597 A0A1B0GV90 55 aa2.07□□□□□ -2.08
RN7SL339P-201ENST00000580597 A0A1W2PNN7 141 aa2.07□□□□□ -2.08
RN7SL339P-201ENST00000580597 M0QXV9 152 aa2.07□□□□□ -2.08
RN7SL339P-201ENST00000580597 RPL28P46779 137 aaKnown RBP2.07□□□□□ -2.08
RN7SL339P-201ENST00000580597 TSPEAR-AS2P59090 65 aa2.07□□□□□ -2.08
RN7SL339P-201ENST00000580597 TTTY13Q9BZ97 58 aa2.07□□□□□ -2.08
RN7SL339P-201ENST00000580597 SPANXB1Q9NS25 103 aaPredicted RBP2.07□□□□□ -2.08
RN7SL339P-201ENST00000580597 TMEM238C9JI98 176 aa2.06□□□□□ -2.08
RN7SL339P-201ENST00000580597 TAX1BP3O14907 124 aa2.06□□□□□ -2.08
RN7SL339P-201ENST00000580597 NDUFA1O15239 70 aa2.06□□□□□ -2.08
RN7SL339P-201ENST00000580597 TIMM17BO60830 172 aa2.06□□□□□ -2.08
RN7SL339P-201ENST00000580597 SPINK8P0C7L1 97 aa2.06□□□□□ -2.08
RN7SL339P-201ENST00000580597 SMIM13P0DJ93 91 aa2.06□□□□□ -2.08
RN7SL339P-201ENST00000580597 ASB16-AS1Q495Z4 193 aa2.06□□□□□ -2.08
RN7SL339P-201ENST00000580597 C1orf64Q8NEQ6 169 aa2.06□□□□□ -2.08
RN7SL339P-201ENST00000580597 CDKN2A-AS1Q9UH64 79 aa2.06□□□□□ -2.08
RN7SL339P-201ENST00000580597 LINC00959A0A1B0GUT2 108 aa2.05□□□□□ -2.08
RN7SL339P-201ENST00000580597 COX7A2LO14548 114 aa2.05□□□□□ -2.08
RN7SL339P-201ENST00000580597 IFITM1P13164 125 aa2.05□□□□□ -2.08
RN7SL339P-201ENST00000580597 FXYD2P54710 66 aa2.05□□□□□ -2.08
RN7SL339P-201ENST00000580597 SPAG11BQ08648 103 aa2.05□□□□□ -2.08
RN7SL339P-201ENST00000580597 SFTA2Q6UW10 78 aa2.05□□□□□ -2.08
RN7SL339P-201ENST00000580597 COPS9Q8WXC6 57 aa2.05□□□□□ -2.08
RN7SL339P-201ENST00000580597 SPANXDQ9BXN6 97 aa2.05□□□□□ -2.08
RN7SL339P-201ENST00000580597 SPANXCQ9NY87 97 aa2.05□□□□□ -2.08
RN7SL339P-201ENST00000580597 A0A0B4J2C4 111 aa2.04□□□□□ -2.08
RN7SL339P-201ENST00000580597 FP248Q71RG6 208 aaPredicted RBP2.04□□□□□ -2.08
RN7SL339P-201ENST00000580597 DAND5Q8N907 189 aa2.04□□□□□ -2.08
RN7SL339P-201ENST00000580597 COX7B2Q8TF08 81 aa2.04□□□□□ -2.08
RN7SL339P-201ENST00000580597 ZNF625Q96I27 306 aaPredicted RBP2.04□□□□□ -2.08
RN7SL339P-201ENST00000580597 NHP2Q9NX24 153 aaKnown RBP2.04□□□□□ -2.08
RN7SL339P-201ENST00000580597 A0A1W2PPM0 123 aa2.03□□□□□ -2.08
RN7SL339P-201ENST00000580597 H3BUT2 72 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms