RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 ATXN8Q156A1 80 aa5.33□□□□□ -1.56
SMARCD2-208ENST00000580054 Q6ZRX8 168 aa5.33□□□□□ -1.56
SMARCD2-208ENST00000580054 A0A1W2PPM0 123 aa5.32□□□□□ -1.56
SMARCD2-208ENST00000580054 hADV29S1A0JD25 119 aa5.32□□□□□ -1.56
SMARCD2-208ENST00000580054 KRTAP9-7A8MTY7 169 aa5.32□□□□□ -1.56
SMARCD2-208ENST00000580054 B5MCH6 92 aa5.32□□□□□ -1.56
SMARCD2-208ENST00000580054 H3BQ85 93 aa5.32□□□□□ -1.56
SMARCD2-208ENST00000580054 KRTAP13-1Q8IUC0 172 aa5.32□□□□□ -1.56
SMARCD2-208ENST00000580054 ASB16-AS1Q495Z4 193 aa5.31□□□□□ -1.56
SMARCD2-208ENST00000580054 FAM229BQ4G0N7 80 aa5.31□□□□□ -1.56
SMARCD2-208ENST00000580054 LCE2CQ5TA81 110 aa5.31□□□□□ -1.56
SMARCD2-208ENST00000580054 GTF2H5Q6ZYL4 71 aa5.31□□□□□ -1.56
SMARCD2-208ENST00000580054 NAA38Q9BRA0 125 aaKnown RBP5.31□□□□□ -1.56
SMARCD2-208ENST00000580054 HIGD2AQ9BW72 106 aa5.31□□□□□ -1.56
SMARCD2-208ENST00000580054 KRTAP4-16G5E9R7 235 aaPredicted RBP5.3□□□□□ -1.56
SMARCD2-208ENST00000580054 OCIAD2Q56VL3 154 aa5.3□□□□□ -1.56
SMARCD2-208ENST00000580054 LINC00575Q6W349 94 aa5.3□□□□□ -1.56
SMARCD2-208ENST00000580054 ZNF706Q9Y5V0 76 aaPredicted RBP5.3□□□□□ -1.56
SMARCD2-208ENST00000580054 TRACP01848 142 aa5.29□□□□□ -1.56
SMARCD2-208ENST00000580054 PRLHP81277 87 aa5.29□□□□□ -1.56
SMARCD2-208ENST00000580054 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.29□□□□□ -1.56
SMARCD2-208ENST00000580054 CLEC2BQ92478 149 aa5.29□□□□□ -1.56
SMARCD2-208ENST00000580054 SPCS1Q9Y6A9 102 aa5.29□□□□□ -1.56
SMARCD2-208ENST00000580054 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.28□□□□□ -1.56
SMARCD2-208ENST00000580054 LST1O00453 97 aa5.28□□□□□ -1.56
SMARCD2-208ENST00000580054 SMCR5Q8TEV8 140 aa5.28□□□□□ -1.56
SMARCD2-208ENST00000580054 TCL1BO95988 128 aa5.27□□□□□ -1.57
SMARCD2-208ENST00000580054 MT1HP80294 61 aa5.27□□□□□ -1.57
SMARCD2-208ENST00000580054 KRTAP13-3Q3SY46 172 aa5.27□□□□□ -1.57
SMARCD2-208ENST00000580054 ORMDL1Q9P0S3 153 aa5.27□□□□□ -1.57
SMARCD2-208ENST00000580054 KRTAP19-2Q3LHN2 52 aa5.26□□□□□ -1.57
SMARCD2-208ENST00000580054 C3orf22Q8N5N4 141 aa5.26□□□□□ -1.57
SMARCD2-208ENST00000580054 PPDPFLQ8WWR9 84 aa5.26□□□□□ -1.57
SMARCD2-208ENST00000580054 K7EP34 96 aa5.25□□□□□ -1.57
SMARCD2-208ENST00000580054 TMEM256-PLSCR3K7ERE1 68 aa5.25□□□□□ -1.57
SMARCD2-208ENST00000580054 Q6ZQY7 126 aa5.25□□□□□ -1.57
SMARCD2-208ENST00000580054 Q9BRP9 147 aa5.25□□□□□ -1.57
SMARCD2-208ENST00000580054 TEX49A0A1B0GTD5 131 aa5.24□□□□□ -1.57
SMARCD2-208ENST00000580054 LORP23490 312 aaPredicted RBP5.24□□□□□ -1.57
SMARCD2-208ENST00000580054 FAM218AQ96MZ4 157 aa5.24□□□□□ -1.57
SMARCD2-208ENST00000580054 C9JAW5 83 aa5.23□□□□□ -1.57
SMARCD2-208ENST00000580054 H3BMG7 143 aa5.23□□□□□ -1.57
SMARCD2-208ENST00000580054 SEC61BP60468 96 aaKnown RBP5.23□□□□□ -1.57
SMARCD2-208ENST00000580054 DEFB105AQ8NG35 78 aa5.23□□□□□ -1.57
SMARCD2-208ENST00000580054 F8WEM9 126 aa5.22□□□□□ -1.57
SMARCD2-208ENST00000580054 H3BT86 120 aa5.22□□□□□ -1.57
SMARCD2-208ENST00000580054 BAALC-AS2P0C853 105 aa5.22□□□□□ -1.57
SMARCD2-208ENST00000580054 KRTAP10-6P60371 365 aaPredicted RBP5.22□□□□□ -1.57
SMARCD2-208ENST00000580054 GAGE2AQ6NT46 116 aa5.22□□□□□ -1.57
SMARCD2-208ENST00000580054 LAMTOR3Q9UHA4 124 aa5.22□□□□□ -1.57
SMARCD2-208ENST00000580054 A0A1B0GV90 55 aa5.21□□□□□ -1.58
SMARCD2-208ENST00000580054 ERC2-IT1O76042 136 aa5.21□□□□□ -1.58
SMARCD2-208ENST00000580054 UBE2V1Q13404 147 aa5.21□□□□□ -1.58
SMARCD2-208ENST00000580054 SPAG11AQ6PDA7 123 aa5.21□□□□□ -1.58
SMARCD2-208ENST00000580054 FP248Q71RG6 208 aaPredicted RBP5.21□□□□□ -1.58
SMARCD2-208ENST00000580054 SPRR4Q96PI1 79 aa5.21□□□□□ -1.58
SMARCD2-208ENST00000580054 IGLV5-48A0A075B6I7 105 aa5.2□□□□□ -1.58
SMARCD2-208ENST00000580054 F8W1H4 67 aa5.2□□□□□ -1.58
SMARCD2-208ENST00000580054 C4orf48Q5BLP8 95 aa5.2□□□□□ -1.58
SMARCD2-208ENST00000580054 ST20-AS1Q8NBB2 130 aa5.2□□□□□ -1.58
SMARCD2-208ENST00000580054 SPRR1BP22528 89 aa5.19□□□□□ -1.58
SMARCD2-208ENST00000580054 ANKRD29Q8N6D5 301 aa5.19□□□□□ -1.58
SMARCD2-208ENST00000580054 JMJD7-PLA2G4BH0Y9G9 81 aa5.18□□□□□ -1.58
SMARCD2-208ENST00000580054 NDUFV3P56181 108 aaKnown RBP5.18□□□□□ -1.58
SMARCD2-208ENST00000580054 C21orf62-AS1Q17RA5 79 aa5.18□□□□□ -1.58
SMARCD2-208ENST00000580054 LINC00483Q53H64 154 aa5.18□□□□□ -1.58
SMARCD2-208ENST00000580054 Q8N377 158 aa5.18□□□□□ -1.58
SMARCD2-208ENST00000580054 Q8NBF4 154 aa5.18□□□□□ -1.58
SMARCD2-208ENST00000580054 SSPOA2VEC9 5147 aa5.17□□□□□ -1.58
SMARCD2-208ENST00000580054 C9orf153Q5TBE3 101 aa5.16□□□□□ -1.58
SMARCD2-208ENST00000580054 DSCR8Q96T75 97 aa5.16□□□□□ -1.58
SMARCD2-208ENST00000580054 FLGP20930 4061 aaPredicted RBP5.15□□□□□ -1.58
SMARCD2-208ENST00000580054 PDE6GP18545 87 aa5.15□□□□□ -1.59
SMARCD2-208ENST00000580054 RBM3P98179 157 aaKnown RBP5.15□□□□□ -1.59
SMARCD2-208ENST00000580054 Q6JHZ5 121 aa5.15□□□□□ -1.59
SMARCD2-208ENST00000580054 MTURNQ8N3F0 131 aa5.15□□□□□ -1.59
SMARCD2-208ENST00000580054 IGLV9-49A0A0B4J1Y8 123 aa5.14□□□□□ -1.59
SMARCD2-208ENST00000580054 SPINK1P00995 79 aa5.14□□□□□ -1.59
SMARCD2-208ENST00000580054 XP32Q5T750 250 aa5.14□□□□□ -1.59
SMARCD2-208ENST00000580054 SSBP3-AS1Q7Z2R9 100 aa5.14□□□□□ -1.59
SMARCD2-208ENST00000580054 USH2AO75445 5202 aa5.12□□□□□ -1.59
SMARCD2-208ENST00000580054 SMIM29Q86T20 159 aa5.12□□□□□ -1.59
SMARCD2-208ENST00000580054 TEN1Q86WV5 123 aa5.12□□□□□ -1.59
SMARCD2-208ENST00000580054 PRO0461Q9UI25 63 aa5.12□□□□□ -1.59
SMARCD2-208ENST00000580054 MOBPQ13875 183 aa5.11□□□□□ -1.59
SMARCD2-208ENST00000580054 IGLV8-61A0A075B6I0 122 aa5.1□□□□□ -1.59
SMARCD2-208ENST00000580054 A0A1B0GV72 72 aa5.1□□□□□ -1.59
SMARCD2-208ENST00000580054 SMCPP49901 116 aaPredicted RBP5.1□□□□□ -1.59
SMARCD2-208ENST00000580054 ETDBQ3ZM63 59 aa5.1□□□□□ -1.59
SMARCD2-208ENST00000580054 J3QR89 54 aa5.09□□□□□ -1.59
SMARCD2-208ENST00000580054 M0R2T5 61 aa5.09□□□□□ -1.59
SMARCD2-208ENST00000580054 RPS29P62273 56 aaKnown RBP5.09□□□□□ -1.59
SMARCD2-208ENST00000580054 LOC110117498A0A087WWA1 95 aa5.08□□□□□ -1.6
SMARCD2-208ENST00000580054 PCOTHQ58A44 107 aa5.08□□□□□ -1.6
SMARCD2-208ENST00000580054 OBSCN-AS1Q96MR7 158 aa5.08□□□□□ -1.6
SMARCD2-208ENST00000580054 VPS25Q9BRG1 176 aa5.08□□□□□ -1.6
SMARCD2-208ENST00000580054 C14orf132Q9NPU4 83 aa5.08□□□□□ -1.6
SMARCD2-208ENST00000580054 TRBV7-4A0A0J9YYF1 115 aa5.07□□□□□ -1.6
SMARCD2-208ENST00000580054 A0A1B0GW54 56 aa5.07□□□□□ -1.6
SMARCD2-208ENST00000580054 CCKP06307 115 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms