RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 ZNF706Q9Y5V0 76 aaPredicted RBP8.36□□□□□ -1.07
TSEN54-206ENST00000579449 TEX49A0A1B0GTD5 131 aa8.34□□□□□ -1.07
TSEN54-206ENST00000579449 H3BQ85 93 aa8.34□□□□□ -1.07
TSEN54-206ENST00000579449 H3BT86 120 aa8.34□□□□□ -1.07
TSEN54-206ENST00000579449 TMEM256-PLSCR3K7ERE1 68 aa8.34□□□□□ -1.07
TSEN54-206ENST00000579449 ANKRD29Q8N6D5 301 aa8.33□□□□□ -1.08
TSEN54-206ENST00000579449 PPDPFLQ8WWR9 84 aa8.33□□□□□ -1.08
TSEN54-206ENST00000579449 PKHD1L1Q86WI1 4243 aa8.33□□□□□ -1.08
TSEN54-206ENST00000579449 KIAA1109Q2LD37 5005 aa8.32□□□□□ -1.08
TSEN54-206ENST00000579449 SPRR1BP22528 89 aa8.32□□□□□ -1.08
TSEN54-206ENST00000579449 F8W1H4 67 aa8.31□□□□□ -1.08
TSEN54-206ENST00000579449 LINC00483Q53H64 154 aa8.31□□□□□ -1.08
TSEN54-206ENST00000579449 C3orf22Q8N5N4 141 aa8.31□□□□□ -1.08
TSEN54-206ENST00000579449 ANAPC11Q9NYG5 84 aa8.31□□□□□ -1.08
TSEN54-206ENST00000579449 SMIM29Q86T20 159 aa8.3□□□□□ -1.08
TSEN54-206ENST00000579449 LINC01600Q96MT4 127 aa8.3□□□□□ -1.08
TSEN54-206ENST00000579449 NDUFV3P56181 108 aaKnown RBP8.29□□□□□ -1.08
TSEN54-206ENST00000579449 LAMTOR3Q9UHA4 124 aa8.29□□□□□ -1.08
TSEN54-206ENST00000579449 KRTAP1-4P0C5Y4 121 aa8.28□□□□□ -1.08
TSEN54-206ENST00000579449 BIRC6Q9NR09 4857 aa8.28□□□□□ -1.08
TSEN54-206ENST00000579449 A0A1B0GV72 72 aa8.26□□□□□ -1.09
TSEN54-206ENST00000579449 LORP23490 312 aaPredicted RBP8.26□□□□□ -1.09
TSEN54-206ENST00000579449 IGLV9-49A0A0B4J1Y8 123 aa8.24□□□□□ -1.09
TSEN54-206ENST00000579449 F8WEM9 126 aa8.24□□□□□ -1.09
TSEN54-206ENST00000579449 FAM229BQ4G0N7 80 aa8.24□□□□□ -1.09
TSEN54-206ENST00000579449 CDIP1Q9H305 208 aa8.24□□□□□ -1.09
TSEN54-206ENST00000579449 ETDBQ3ZM63 59 aa8.23□□□□□ -1.09
TSEN54-206ENST00000579449 A0A087X002 238 aa8.22□□□□□ -1.09
TSEN54-206ENST00000579449 JMJD7-PLA2G4BH0Y9G9 81 aa8.22□□□□□ -1.09
TSEN54-206ENST00000579449 OBSCN-AS1Q96MR7 158 aa8.22□□□□□ -1.09
TSEN54-206ENST00000579449 KRTAP4-5Q9BYR2 181 aa8.22□□□□□ -1.09
TSEN54-206ENST00000579449 CRYGAP11844 174 aa8.21□□□□□ -1.1
TSEN54-206ENST00000579449 RBM3P98179 157 aaKnown RBP8.21□□□□□ -1.1
TSEN54-206ENST00000579449 C9orf153Q5TBE3 101 aa8.21□□□□□ -1.1
TSEN54-206ENST00000579449 TEN1Q86WV5 123 aa8.21□□□□□ -1.1
TSEN54-206ENST00000579449 IGLV8-61A0A075B6I0 122 aa8.2□□□□□ -1.1
TSEN54-206ENST00000579449 MOBPQ13875 183 aa8.2□□□□□ -1.1
TSEN54-206ENST00000579449 KRTAP13-2Q52LG2 175 aa8.2□□□□□ -1.1
TSEN54-206ENST00000579449 H3BS24 57 aa8.19□□□□□ -1.1
TSEN54-206ENST00000579449 PRR26Q8N8Z3 221 aa8.18□□□□□ -1.1
TSEN54-206ENST00000579449 Q8NBF4 154 aa8.18□□□□□ -1.1
TSEN54-206ENST00000579449 C14orf132Q9NPU4 83 aa8.18□□□□□ -1.1
TSEN54-206ENST00000579449 A0A0G2JQZ4 141 aa8.17□□□□□ -1.1
TSEN54-206ENST00000579449 TRBV7-4A0A0J9YYF1 115 aa8.17□□□□□ -1.1
TSEN54-206ENST00000579449 DSCR8Q96T75 97 aa8.17□□□□□ -1.1
TSEN54-206ENST00000579449 Q6JHZ5 121 aa8.16□□□□□ -1.1
TSEN54-206ENST00000579449 IGFL1Q6UW32 110 aa8.16□□□□□ -1.1
TSEN54-206ENST00000579449 SSBP3-AS1Q7Z2R9 100 aa8.15□□□□□ -1.1
TSEN54-206ENST00000579449 TYMSOSQ8TAI1 123 aa8.15□□□□□ -1.1
TSEN54-206ENST00000579449 FLG2Q5D862 2391 aaPredicted RBP8.15□□□□□ -1.1
TSEN54-206ENST00000579449 LOC110117498A0A087WWA1 95 aa8.14□□□□□ -1.11
TSEN54-206ENST00000579449 Q6ZQT0 140 aa8.14□□□□□ -1.11
TSEN54-206ENST00000579449 HERC2O95714 4834 aa8.13□□□□□ -1.11
TSEN54-206ENST00000579449 PDE6GP18545 87 aa8.12□□□□□ -1.11
TSEN54-206ENST00000579449 A0A1W2PNM2 257 aa8.11□□□□□ -1.11
TSEN54-206ENST00000579449 CCKP06307 115 aa8.1□□□□□ -1.11
TSEN54-206ENST00000579449 VPS25Q9BRG1 176 aa8.1□□□□□ -1.11
TSEN54-206ENST00000579449 HRCT1Q6UXD1 115 aa8.09□□□□□ -1.11
TSEN54-206ENST00000579449 FAT3Q8TDW7 4589 aa8.09□□□□□ -1.11
TSEN54-206ENST00000579449 KRTAP10-8P60410 259 aa8.08□□□□□ -1.12
TSEN54-206ENST00000579449 LRP1Q07954 4544 aaKnown RBP8.08□□□□□ -1.12
TSEN54-206ENST00000579449 OXTP01178 125 aa8.06□□□□□ -1.12
TSEN54-206ENST00000579449 Q6Q795 121 aa8.06□□□□□ -1.12
TSEN54-206ENST00000579449 SVIPQ8NHG7 77 aa8.06□□□□□ -1.12
TSEN54-206ENST00000579449 CD164Q04900 197 aa8.05□□□□□ -1.12
TSEN54-206ENST00000579449 LINC00304Q8N9R0 145 aa8.05□□□□□ -1.12
TSEN54-206ENST00000579449 TRBV7-7A0A0K0K1E9 115 aa8.04□□□□□ -1.12
TSEN54-206ENST00000579449 TNXBP22105 4242 aa8.03□□□□□ -1.12
TSEN54-206ENST00000579449 MT1HL1P0DM35 61 aa8.03□□□□□ -1.12
TSEN54-206ENST00000579449 KRTAP29-1A8MX34 341 aaPredicted RBP8.02□□□□□ -1.13
TSEN54-206ENST00000579449 A0A087WSZ3 146 aa8.01□□□□□ -1.13
TSEN54-206ENST00000579449 SPAG11AQ6PDA7 123 aa8.01□□□□□ -1.13
TSEN54-206ENST00000579449 MYCBP2O75592 4640 aa8.01□□□□□ -1.13
TSEN54-206ENST00000579449 A0A1B0GW54 56 aa8□□□□□ -1.13
TSEN54-206ENST00000579449 J3QR89 54 aa8□□□□□ -1.13
TSEN54-206ENST00000579449 SPINK1P00995 79 aa7.99□□□□□ -1.13
TSEN54-206ENST00000579449 FAM240AA0A1B0GVK7 77 aa7.97□□□□□ -1.13
TSEN54-206ENST00000579449 LINC00846Q9NV44 126 aa7.97□□□□□ -1.13
TSEN54-206ENST00000579449 K7ERU9 68 aa7.96□□□□□ -1.14
TSEN54-206ENST00000579449 ACYP1P07311 99 aa7.96□□□□□ -1.14
TSEN54-206ENST00000579449 ABCA13Q86UQ4 5058 aa7.95□□□□□ -1.14
TSEN54-206ENST00000579449 RPS29P62273 56 aaKnown RBP7.95□□□□□ -1.14
TSEN54-206ENST00000579449 LIMD2Q9BT23 127 aa7.95□□□□□ -1.14
TSEN54-206ENST00000579449 Q5XG85 94 aa7.94□□□□□ -1.14
TSEN54-206ENST00000579449 SS18L2Q9UHA2 77 aa7.94□□□□□ -1.14
TSEN54-206ENST00000579449 DMBT1Q9UGM3 2413 aaPredicted RBP7.93□□□□□ -1.14
TSEN54-206ENST00000579449 NREPQ16612 68 aa7.93□□□□□ -1.14
TSEN54-206ENST00000579449 Q6ZVQ6 151 aa7.92□□□□□ -1.14
TSEN54-206ENST00000579449 UBL5Q9BZL1 73 aa7.92□□□□□ -1.14
TSEN54-206ENST00000579449 ASB16-AS1Q495Z4 193 aa7.91□□□□□ -1.14
TSEN54-206ENST00000579449 Q96NJ1 140 aa7.89□□□□□ -1.15
TSEN54-206ENST00000579449 LINC00472Q9H8W2 130 aa7.88□□□□□ -1.15
TSEN54-206ENST00000579449 DEFB116Q30KQ4 102 aa7.87□□□□□ -1.15
TSEN54-206ENST00000579449 C1orf195Q5TG92 126 aa7.87□□□□□ -1.15
TSEN54-206ENST00000579449 RETNLBQ9BQ08 111 aa7.84□□□□□ -1.15
TSEN54-206ENST00000579449 BPY2O14599 106 aa7.83□□□□□ -1.16
TSEN54-206ENST00000579449 IGKV4-1P06312 121 aa7.83□□□□□ -1.16
TSEN54-206ENST00000579449 SIGMAR1Q99720 223 aa7.83□□□□□ -1.16
TSEN54-206ENST00000579449 LINC00643Q86TS7 51 aa7.82□□□□□ -1.16
TSEN54-206ENST00000579449 J3KT08 172 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms