RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 D6R8Y8 96 aa5.17□□□□□ -1.58
PTPRM-210ENST00000578916 F8VRH5 84 aa5.17□□□□□ -1.58
PTPRM-210ENST00000578916 SYS1-DBNDD2H3BUS1 97 aa5.17□□□□□ -1.58
PTPRM-210ENST00000578916 K7ERJ3 54 aa5.17□□□□□ -1.58
PTPRM-210ENST00000578916 HBDP02042 147 aa5.17□□□□□ -1.58
PTPRM-210ENST00000578916 ETDBQ3ZM63 59 aa5.17□□□□□ -1.58
PTPRM-210ENST00000578916 V9GYV3 84 aa5.17□□□□□ -1.58
PTPRM-210ENST00000578916 NPYP01303 97 aa5.16□□□□□ -1.58
PTPRM-210ENST00000578916 ATOX1O00244 68 aa5.15□□□□□ -1.59
PTPRM-210ENST00000578916 TCL1BO95988 128 aa5.15□□□□□ -1.59
PTPRM-210ENST00000578916 PRLHP81277 87 aa5.15□□□□□ -1.59
PTPRM-210ENST00000578916 ZC2HC1BQ5TFG8 222 aa5.15□□□□□ -1.59
PTPRM-210ENST00000578916 IGLV5-37A0A075B6J1 123 aa5.14□□□□□ -1.59
PTPRM-210ENST00000578916 IGKV2-28A0A075B6P5 120 aa5.14□□□□□ -1.59
PTPRM-210ENST00000578916 IGKV2D-28P01615 120 aa5.14□□□□□ -1.59
PTPRM-210ENST00000578916 IGKCP01834 107 aa5.14□□□□□ -1.59
PTPRM-210ENST00000578916 ATP5EP56381 51 aaPredicted RBP5.14□□□□□ -1.59
PTPRM-210ENST00000578916 C7orf65Q6ZTY9 151 aa5.14□□□□□ -1.59
PTPRM-210ENST00000578916 CFC1BP0CG36 223 aa5.13□□□□□ -1.59
PTPRM-210ENST00000578916 LINC01554Q52M75 96 aa5.13□□□□□ -1.59
PTPRM-210ENST00000578916 AMELXQ99217 191 aa5.13□□□□□ -1.59
PTPRM-210ENST00000578916 SMIM27A0A1W2PRY6 76 aa5.12□□□□□ -1.59
PTPRM-210ENST00000578916 C2orf66Q6UXQ4 117 aa5.12□□□□□ -1.59
PTPRM-210ENST00000578916 ORMDL3Q8N138 153 aa5.12□□□□□ -1.59
PTPRM-210ENST00000578916 CDKN2A-AS1Q9UH64 79 aa5.12□□□□□ -1.59
PTPRM-210ENST00000578916 TMEM136Q6ZRR5 245 aa5.11□□□□□ -1.59
PTPRM-210ENST00000578916 DAND5Q8N907 189 aa5.11□□□□□ -1.59
PTPRM-210ENST00000578916 LORP23490 312 aaPredicted RBP5.1□□□□□ -1.59
PTPRM-210ENST00000578916 MT1HP80294 61 aa5.1□□□□□ -1.59
PTPRM-210ENST00000578916 HIGD2AQ9BW72 106 aa5.1□□□□□ -1.59
PTPRM-210ENST00000578916 NDUFA12Q9UI09 145 aa5.1□□□□□ -1.59
PTPRM-210ENST00000578916 hADV29S1A0JD25 119 aa5.09□□□□□ -1.59
PTPRM-210ENST00000578916 TIMM17BO60830 172 aa5.09□□□□□ -1.59
PTPRM-210ENST00000578916 SMIM13P0DJ93 91 aa5.09□□□□□ -1.59
PTPRM-210ENST00000578916 HERVK_113P61574 105 aa5.09□□□□□ -1.59
PTPRM-210ENST00000578916 Q8NBF4 154 aa5.09□□□□□ -1.59
PTPRM-210ENST00000578916 COX7B2Q8TF08 81 aa5.09□□□□□ -1.59
PTPRM-210ENST00000578916 PRO0461Q9UI25 63 aa5.09□□□□□ -1.59
PTPRM-210ENST00000578916 A0A1B0GW54 56 aa5.08□□□□□ -1.6
PTPRM-210ENST00000578916 IGIPA6NJ69 53 aa5.08□□□□□ -1.6
PTPRM-210ENST00000578916 SPINK1P00995 79 aa5.08□□□□□ -1.6
PTPRM-210ENST00000578916 SPRR4Q96PI1 79 aa5.08□□□□□ -1.6
PTPRM-210ENST00000578916 SMIM1B2RUZ4 78 aa5.07□□□□□ -1.6
PTPRM-210ENST00000578916 XP32Q5T750 250 aa5.07□□□□□ -1.6
PTPRM-210ENST00000578916 CEND1Q8N111 149 aa5.07□□□□□ -1.6
PTPRM-210ENST00000578916 Q8N8P6 123 aa5.07□□□□□ -1.6
PTPRM-210ENST00000578916 KRTAP9-7A8MTY7 169 aa5.06□□□□□ -1.6
PTPRM-210ENST00000578916 KRTDAPP60985 99 aa5.06□□□□□ -1.6
PTPRM-210ENST00000578916 ADAMTSL4-AS1Q5T5F5 129 aa5.06□□□□□ -1.6
PTPRM-210ENST00000578916 FAM19A2Q8N3H0 131 aa5.06□□□□□ -1.6
PTPRM-210ENST00000578916 KRTAP10-6P60371 365 aaPredicted RBP5.05□□□□□ -1.6
PTPRM-210ENST00000578916 KRTAP19-2Q3LHN2 52 aa5.05□□□□□ -1.6
PTPRM-210ENST00000578916 K7EMI3 77 aa5.04□□□□□ -1.6
PTPRM-210ENST00000578916 SERP2Q8N6R1 65 aa5.04□□□□□ -1.6
PTPRM-210ENST00000578916 MPLKIPQ8TAP9 179 aa5.04□□□□□ -1.6
PTPRM-210ENST00000578916 SLC25A20O43772 301 aa5.03□□□□□ -1.6
PTPRM-210ENST00000578916 Q8N377 158 aa5.03□□□□□ -1.6
PTPRM-210ENST00000578916 SND1-IT1Q9HBX3 110 aa5.03□□□□□ -1.6
PTPRM-210ENST00000578916 NXT2Q9NPJ8 142 aaKnown RBP5.03□□□□□ -1.6
PTPRM-210ENST00000578916 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.02□□□□□ -1.61
PTPRM-210ENST00000578916 M0R2T5 61 aa5.02□□□□□ -1.61
PTPRM-210ENST00000578916 RPS29P62273 56 aaKnown RBP5.02□□□□□ -1.61
PTPRM-210ENST00000578916 IGLV8-61A0A075B6I0 122 aa5.01□□□□□ -1.61
PTPRM-210ENST00000578916 IGLV5-39A0A0G2JS06 123 aa5.01□□□□□ -1.61
PTPRM-210ENST00000578916 PCOTHQ58A44 107 aa5.01□□□□□ -1.61
PTPRM-210ENST00000578916 SOSTDC1Q6X4U4 206 aa5.01□□□□□ -1.61
PTPRM-210ENST00000578916 ATP11AUNQ6ZP68 121 aa5.01□□□□□ -1.61
PTPRM-210ENST00000578916 SCGB3A1Q96QR1 104 aa5.01□□□□□ -1.61
PTPRM-210ENST00000578916 LEPROTO15243 131 aa5□□□□□ -1.61
PTPRM-210ENST00000578916 HIST1H4AP62805 103 aaKnown RBP5□□□□□ -1.61
PTPRM-210ENST00000578916 Q8NDZ9 215 aa5□□□□□ -1.61
PTPRM-210ENST00000578916 SMCR5Q8TEV8 140 aa5□□□□□ -1.61
PTPRM-210ENST00000578916 KRTAP16-1A8MUX0 517 aa4.99□□□□□ -1.61
PTPRM-210ENST00000578916 ACYP1P07311 99 aa4.99□□□□□ -1.61
PTPRM-210ENST00000578916 MOBPQ13875 183 aa4.99□□□□□ -1.61
PTPRM-210ENST00000578916 COX17Q14061 63 aa4.99□□□□□ -1.61
PTPRM-210ENST00000578916 SSBP3-AS1Q7Z2R9 100 aa4.99□□□□□ -1.61
PTPRM-210ENST00000578916 CCKP06307 115 aa4.98□□□□□ -1.61
PTPRM-210ENST00000578916 COX8AP10176 69 aa4.98□□□□□ -1.61
PTPRM-210ENST00000578916 LINC00483Q53H64 154 aa4.98□□□□□ -1.61
PTPRM-210ENST00000578916 ZNF625Q96I27 306 aaPredicted RBP4.98□□□□□ -1.61
PTPRM-210ENST00000578916 PRAC1Q96KF2 57 aa4.98□□□□□ -1.61
PTPRM-210ENST00000578916 ETDCA0A1B0GVM5 59 aa4.97□□□□□ -1.61
PTPRM-210ENST00000578916 RBM3P98179 157 aaKnown RBP4.97□□□□□ -1.61
PTPRM-210ENST00000578916 CLEC2BQ92478 149 aa4.97□□□□□ -1.61
PTPRM-210ENST00000578916 TRAPPC1Q9Y5R8 145 aa4.97□□□□□ -1.61
PTPRM-210ENST00000578916 NDUFC1O43677 76 aa4.96□□□□□ -1.62
PTPRM-210ENST00000578916 C3orf79P0CE67 100 aa4.96□□□□□ -1.62
PTPRM-210ENST00000578916 OCR1Q9BZK8 76 aa4.96□□□□□ -1.62
PTPRM-210ENST00000578916 LINC01549A6NIU2 74 aa4.95□□□□□ -1.62
PTPRM-210ENST00000578916 A6NN06 94 aa4.95□□□□□ -1.62
PTPRM-210ENST00000578916 TMEM170BQ5T4T1 132 aa4.95□□□□□ -1.62
PTPRM-210ENST00000578916 COX6B2Q6YFQ2 88 aa4.95□□□□□ -1.62
PTPRM-210ENST00000578916 BAGE3Q86Y29 109 aa4.95□□□□□ -1.62
PTPRM-210ENST00000578916 HIGD1BQ9P298 99 aa4.95□□□□□ -1.62
PTPRM-210ENST00000578916 SERF1AO75920 110 aa4.94□□□□□ -1.62
PTPRM-210ENST00000578916 SPRR1AP35321 89 aa4.94□□□□□ -1.62
PTPRM-210ENST00000578916 LINC00158P58513 81 aa4.94□□□□□ -1.62
PTPRM-210ENST00000578916 S100A7L2Q5SY68 101 aa4.94□□□□□ -1.62
PTPRM-210ENST00000578916 C9orf92A6NGG3 77 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms