RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 SACSQ9NZJ4 4579 aa-0.49□□□□□ -2.49
CDC27-219ENST00000576484 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.49□□□□□ -2.49
CDC27-219ENST00000576484 USP9YO00507 2555 aaPredicted RBP-0.5□□□□□ -2.49
CDC27-219ENST00000576484 RGPD3A6NKT7 1758 aaPredicted RBP-0.5□□□□□ -2.49
CDC27-219ENST00000576484 ZZEF1O43149 2961 aa-0.5□□□□□ -2.49
CDC27-219ENST00000576484 TRAV21A0A0B4J279 112 aa-0.5□□□□□ -2.49
CDC27-219ENST00000576484 ITPR3Q14573 2671 aa-0.51□□□□□ -2.49
CDC27-219ENST00000576484 MT1HP80294 61 aa-0.51□□□□□ -2.49
CDC27-219ENST00000576484 DMXL1Q9Y485 3027 aa-0.51□□□□□ -2.49
CDC27-219ENST00000576484 DNAH7Q8WXX0 4024 aa-0.51□□□□□ -2.49
CDC27-219ENST00000576484 KALRNO60229 2985 aa-0.51□□□□□ -2.49
CDC27-219ENST00000576484 WIZO95785 1651 aa-0.52□□□□□ -2.49
CDC27-219ENST00000576484 NESP48681 1621 aa-0.52□□□□□ -2.49
CDC27-219ENST00000576484 DNAH8Q96JB1 4490 aa-0.52□□□□□ -2.49
CDC27-219ENST00000576484 CEBPZOSA8MTT3 80 aa-0.52□□□□□ -2.49
CDC27-219ENST00000576484 NDUFA3O95167 84 aa-0.52□□□□□ -2.49
CDC27-219ENST00000576484 ACYP1P07311 99 aa-0.52□□□□□ -2.49
CDC27-219ENST00000576484 DNHD1Q96M86 4753 aa-0.52□□□□□ -2.49
CDC27-219ENST00000576484 POLR1AO95602 1720 aaPredicted RBP-0.52□□□□□ -2.49
CDC27-219ENST00000576484 SUPT6HQ7KZ85 1726 aaKnown RBP-0.52□□□□□ -2.49
CDC27-219ENST00000576484 DEPDC5O75140 1603 aa-0.53□□□□□ -2.49
CDC27-219ENST00000576484 USP32Q8NFA0 1604 aa-0.53□□□□□ -2.49
CDC27-219ENST00000576484 RELNP78509 3460 aa-0.53□□□□□ -2.49
CDC27-219ENST00000576484 NDUFB1O75438 58 aa-0.53□□□□□ -2.49
CDC27-219ENST00000576484 WFDC9Q8NEX5 89 aa-0.53□□□□□ -2.49
CDC27-219ENST00000576484 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.53□□□□□ -2.49
CDC27-219ENST00000576484 CMYA5Q8N3K9 4069 aa-0.53□□□□□ -2.49
CDC27-219ENST00000576484 DYNC1H1Q14204 4646 aaKnown RBP-0.53□□□□□ -2.49
CDC27-219ENST00000576484 TMEM131LA2VDJ0 1609 aa-0.53□□□□□ -2.49
CDC27-219ENST00000576484 ANKRD11Q6UB99 2663 aaPredicted RBP-0.53□□□□□ -2.49
CDC27-219ENST00000576484 NWD1Q149M9 1564 aa-0.53□□□□□ -2.49
CDC27-219ENST00000576484 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.53□□□□□ -2.49
CDC27-219ENST00000576484 DSPP15924 2871 aaKnown RBP-0.54□□□□□ -2.5
CDC27-219ENST00000576484 SCN11AQ9UI33 1791 aa-0.54□□□□□ -2.5
CDC27-219ENST00000576484 A0A0C4DFX4 3053 aa-0.54□□□□□ -2.5
CDC27-219ENST00000576484 C3orf79P0CE67 100 aa-0.54□□□□□ -2.5
CDC27-219ENST00000576484 RANBP2P49792 3224 aaKnown RBP-0.54□□□□□ -2.5
CDC27-219ENST00000576484 MAGI3Q5TCQ9 1506 aa-0.54□□□□□ -2.5
CDC27-219ENST00000576484 PRLHP81277 87 aa-0.55□□□□□ -2.5
CDC27-219ENST00000576484 DEFA5Q01523 94 aa-0.55□□□□□ -2.5
CDC27-219ENST00000576484 PRO3102Q9H379 93 aa-0.55□□□□□ -2.5
CDC27-219ENST00000576484 S4R3F8 94 aa-0.55□□□□□ -2.5
CDC27-219ENST00000576484 SPG11Q96JI7 2443 aa-0.55□□□□□ -2.5
CDC27-219ENST00000576484 LTN1O94822 1766 aa-0.55□□□□□ -2.5
CDC27-219ENST00000576484 KIF14Q15058 1648 aa-0.56□□□□□ -2.5
CDC27-219ENST00000576484 THOC2Q8NI27 1593 aaKnown RBP-0.56□□□□□ -2.5
CDC27-219ENST00000576484 MYO18BQ8IUG5 2567 aa-0.56□□□□□ -2.5
CDC27-219ENST00000576484 COL12A1Q99715 3063 aa-0.56□□□□□ -2.5
CDC27-219ENST00000576484 LCE6AA0A183 80 aa-0.56□□□□□ -2.5
CDC27-219ENST00000576484 KRTAP19-5Q3LI72 72 aa-0.56□□□□□ -2.5
CDC27-219ENST00000576484 MAP3K4Q9Y6R4 1608 aa-0.56□□□□□ -2.5
CDC27-219ENST00000576484 FASNP49327 2511 aaKnown RBP-0.57□□□□□ -2.5
CDC27-219ENST00000576484 PPLO60437 1756 aa-0.57□□□□□ -2.5
CDC27-219ENST00000576484 WDR87Q6ZQQ6 2873 aa-0.57□□□□□ -2.5
CDC27-219ENST00000576484 URB2Q14146 1524 aaKnown RBP-0.57□□□□□ -2.5
CDC27-219ENST00000576484 LYNX1G3V0Z9 82 aa-0.57□□□□□ -2.5
CDC27-219ENST00000576484 LINC00158P58513 81 aa-0.57□□□□□ -2.5
CDC27-219ENST00000576484 DEFB110Q30KQ9 67 aa-0.57□□□□□ -2.5
CDC27-219ENST00000576484 CCDC88BA6NC98 1476 aa-0.57□□□□□ -2.5
CDC27-219ENST00000576484 ABCA13Q86UQ4 5058 aa-0.57□□□□□ -2.5
CDC27-219ENST00000576484 DIP2BQ9P265 1576 aa-0.57□□□□□ -2.5
CDC27-219ENST00000576484 DOT1LQ8TEK3 1739 aa-0.58□□□□□ -2.5
CDC27-219ENST00000576484 KANTRA0A1W2PQU2 76 aa-0.58□□□□□ -2.5
CDC27-219ENST00000576484 H0YAA0 97 aa-0.58□□□□□ -2.5
CDC27-219ENST00000576484 DEFB1P60022 68 aa-0.58□□□□□ -2.5
CDC27-219ENST00000576484 TDRG1Q3Y452 100 aa-0.58□□□□□ -2.5
CDC27-219ENST00000576484 DNAH17Q9UFH2 4485 aa-0.58□□□□□ -2.5
CDC27-219ENST00000576484 UACAQ9BZF9 1416 aa-0.58□□□□□ -2.5
CDC27-219ENST00000576484 NBEAQ8NFP9 2946 aa-0.58□□□□□ -2.5
CDC27-219ENST00000576484 NCOA2Q15596 1464 aa-0.59□□□□□ -2.5
CDC27-219ENST00000576484 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.59□□□□□ -2.5
CDC27-219ENST00000576484 FRYQ5TBA9 3013 aa-0.59□□□□□ -2.5
CDC27-219ENST00000576484 GCN1Q92616 2671 aaKnown RBP-0.59□□□□□ -2.5
CDC27-219ENST00000576484 DDX60LQ5H9U9 1706 aaKnown RBP-0.59□□□□□ -2.5
CDC27-219ENST00000576484 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.59□□□□□ -2.5
CDC27-219ENST00000576484 NIPBLQ6KC79 2804 aaeCLIP-0.6□□□□□ -2.5
CDC27-219ENST00000576484 ITSN1Q15811 1721 aa-0.6□□□□□ -2.51
CDC27-219ENST00000576484 GNG2P59768 71 aa-0.6□□□□□ -2.51
CDC27-219ENST00000576484 MT1XP80297 61 aa-0.6□□□□□ -2.51
CDC27-219ENST00000576484 ZNF831Q5JPB2 1677 aa-0.6□□□□□ -2.51
CDC27-219ENST00000576484 ZC3H13Q5T200 1668 aaKnown RBP-0.6□□□□□ -2.51
CDC27-219ENST00000576484 ARFGEF2Q9Y6D5 1785 aa-0.6□□□□□ -2.51
CDC27-219ENST00000576484 MGAM2Q2M2H8 2515 aa-0.61□□□□□ -2.51
CDC27-219ENST00000576484 ITSN2Q9NZM3 1697 aa-0.61□□□□□ -2.51
CDC27-219ENST00000576484 IFI6P09912 130 aa-0.61□□□□□ -2.51
CDC27-219ENST00000576484 DEFB130BP0DP73 79 aa-0.61□□□□□ -2.51
CDC27-219ENST00000576484 DEFB130AP0DP74 79 aa-0.61□□□□□ -2.51
CDC27-219ENST00000576484 IAPPP10997 89 aa-0.61□□□□□ -2.51
CDC27-219ENST00000576484 DEFB106AQ8N104 65 aa-0.61□□□□□ -2.51
CDC27-219ENST00000576484 SPENQ96T58 3664 aaKnown RBP-0.61□□□□□ -2.51
CDC27-219ENST00000576484 NBEAL2Q6ZNJ1 2754 aa-0.62□□□□□ -2.51
CDC27-219ENST00000576484 PLCH1Q4KWH8 1693 aa-0.62□□□□□ -2.51
CDC27-219ENST00000576484 ANKRD36CQ5JPF3 1778 aa-0.62□□□□□ -2.51
CDC27-219ENST00000576484 KIAA0586Q9BVV6 1533 aa-0.62□□□□□ -2.51
CDC27-219ENST00000576484 PIK3C2BO00750 1634 aa-0.62□□□□□ -2.51
CDC27-219ENST00000576484 RNF17Q9BXT8 1623 aaKnown RBP-0.62□□□□□ -2.51
CDC27-219ENST00000576484 PARP4Q9UKK3 1724 aaKnown RBP-0.62□□□□□ -2.51
CDC27-219ENST00000576484 TOGARAM1Q9Y4F4 1720 aa-0.62□□□□□ -2.51
CDC27-219ENST00000576484 MTORP42345 2549 aa-0.62□□□□□ -2.51
CDC27-219ENST00000576484 USP9XQ93008 2570 aaPredicted RBP-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms