RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 A0A1B0GV72 72 aa9.87□□□□□ -0.83
ERCC4-208ENST00000576348 C9orf153Q5TBE3 101 aa9.87□□□□□ -0.83
ERCC4-208ENST00000576348 PRO0461Q9UI25 63 aa9.87□□□□□ -0.83
ERCC4-208ENST00000576348 CRYGAP11844 174 aa9.86□□□□□ -0.83
ERCC4-208ENST00000576348 HSPG2P98160 4391 aa9.85□□□□□ -0.83
ERCC4-208ENST00000576348 KRTAP17-1Q9BYP8 105 aa9.85□□□□□ -0.83
ERCC4-208ENST00000576348 SRRM2Q9UQ35 2752 aaKnown RBP9.85□□□□□ -0.83
ERCC4-208ENST00000576348 SMCPP49901 116 aaPredicted RBP9.84□□□□□ -0.83
ERCC4-208ENST00000576348 SMIM29Q86T20 159 aa9.84□□□□□ -0.83
ERCC4-208ENST00000576348 JMJD7-PLA2G4BH0Y9G9 81 aa9.83□□□□□ -0.84
ERCC4-208ENST00000576348 KRTAP1-4P0C5Y4 121 aa9.83□□□□□ -0.84
ERCC4-208ENST00000576348 RBM3P98179 157 aaKnown RBP9.82□□□□□ -0.84
ERCC4-208ENST00000576348 MOBPQ13875 183 aa9.82□□□□□ -0.84
ERCC4-208ENST00000576348 RYR1P21817 5038 aa9.82□□□□□ -0.84
ERCC4-208ENST00000576348 KIAA1109Q2LD37 5005 aa9.81□□□□□ -0.84
ERCC4-208ENST00000576348 Q8NBF4 154 aa9.8□□□□□ -0.84
ERCC4-208ENST00000576348 LINC01600Q96MT4 127 aa9.8□□□□□ -0.84
ERCC4-208ENST00000576348 DSCR8Q96T75 97 aa9.8□□□□□ -0.84
ERCC4-208ENST00000576348 VPS13BQ7Z7G8 4022 aa9.79□□□□□ -0.84
ERCC4-208ENST00000576348 A0A087X002 238 aa9.79□□□□□ -0.84
ERCC4-208ENST00000576348 Q6JHZ5 121 aa9.79□□□□□ -0.84
ERCC4-208ENST00000576348 TEN1Q86WV5 123 aa9.79□□□□□ -0.84
ERCC4-208ENST00000576348 FAT1Q14517 4588 aa9.78□□□□□ -0.84
ERCC4-208ENST00000576348 ETDBQ3ZM63 59 aa9.78□□□□□ -0.84
ERCC4-208ENST00000576348 PRR26Q8N8Z3 221 aa9.78□□□□□ -0.84
ERCC4-208ENST00000576348 TYMSOSQ8TAI1 123 aa9.78□□□□□ -0.84
ERCC4-208ENST00000576348 C14orf132Q9NPU4 83 aa9.76□□□□□ -0.85
ERCC4-208ENST00000576348 BIRC6Q9NR09 4857 aa9.76□□□□□ -0.85
ERCC4-208ENST00000576348 IGLV8-61A0A075B6I0 122 aa9.75□□□□□ -0.85
ERCC4-208ENST00000576348 SSBP3-AS1Q7Z2R9 100 aa9.75□□□□□ -0.85
ERCC4-208ENST00000576348 KRTAP13-2Q52LG2 175 aa9.74□□□□□ -0.85
ERCC4-208ENST00000576348 OBSCN-AS1Q96MR7 158 aa9.74□□□□□ -0.85
ERCC4-208ENST00000576348 KRTAP4-5Q9BYR2 181 aa9.74□□□□□ -0.85
ERCC4-208ENST00000576348 PDE6GP18545 87 aa9.73□□□□□ -0.85
ERCC4-208ENST00000576348 VPS25Q9BRG1 176 aa9.73□□□□□ -0.85
ERCC4-208ENST00000576348 IGFL1Q6UW32 110 aa9.72□□□□□ -0.85
ERCC4-208ENST00000576348 LOC110117498A0A087WWA1 95 aa9.7□□□□□ -0.86
ERCC4-208ENST00000576348 TRBV7-4A0A0J9YYF1 115 aa9.7□□□□□ -0.86
ERCC4-208ENST00000576348 C21orf62-AS1Q17RA5 79 aa9.7□□□□□ -0.86
ERCC4-208ENST00000576348 C4orf48Q5BLP8 95 aa9.7□□□□□ -0.86
ERCC4-208ENST00000576348 A0A0G2JQZ4 141 aa9.69□□□□□ -0.86
ERCC4-208ENST00000576348 CCKP06307 115 aa9.69□□□□□ -0.86
ERCC4-208ENST00000576348 OXTP01178 125 aa9.68□□□□□ -0.86
ERCC4-208ENST00000576348 HRCT1Q6UXD1 115 aa9.68□□□□□ -0.86
ERCC4-208ENST00000576348 Q6ZQT0 140 aa9.67□□□□□ -0.86
ERCC4-208ENST00000576348 LINC00304Q8N9R0 145 aa9.66□□□□□ -0.86
ERCC4-208ENST00000576348 PKHD1L1Q86WI1 4243 aa9.64□□□□□ -0.87
ERCC4-208ENST00000576348 A0A1W2PNM2 257 aa9.63□□□□□ -0.87
ERCC4-208ENST00000576348 CD164Q04900 197 aa9.62□□□□□ -0.87
ERCC4-208ENST00000576348 SPAG11AQ6PDA7 123 aa9.62□□□□□ -0.87
ERCC4-208ENST00000576348 FLG2Q5D862 2391 aaPredicted RBP9.61□□□□□ -0.87
ERCC4-208ENST00000576348 J3QR89 54 aa9.61□□□□□ -0.87
ERCC4-208ENST00000576348 KRTAP10-8P60410 259 aa9.61□□□□□ -0.87
ERCC4-208ENST00000576348 Q6Q795 121 aa9.6□□□□□ -0.87
ERCC4-208ENST00000576348 TRBV7-7A0A0K0K1E9 115 aa9.59□□□□□ -0.87
ERCC4-208ENST00000576348 KRTAP29-1A8MX34 341 aaPredicted RBP9.59□□□□□ -0.87
ERCC4-208ENST00000576348 HERC2O95714 4834 aa9.58□□□□□ -0.88
ERCC4-208ENST00000576348 J3QL48 77 aa9.58□□□□□ -0.88
ERCC4-208ENST00000576348 SPINK1P00995 79 aa9.58□□□□□ -0.88
ERCC4-208ENST00000576348 A0A087WSZ3 146 aa9.57□□□□□ -0.88
ERCC4-208ENST00000576348 A0A1B0GW54 56 aa9.57□□□□□ -0.88
ERCC4-208ENST00000576348 LIMD2Q9BT23 127 aa9.57□□□□□ -0.88
ERCC4-208ENST00000576348 SS18L2Q9UHA2 77 aa9.56□□□□□ -0.88
ERCC4-208ENST00000576348 ACYP1P07311 99 aa9.53□□□□□ -0.88
ERCC4-208ENST00000576348 MT1HL1P0DM35 61 aa9.53□□□□□ -0.88
ERCC4-208ENST00000576348 K7ERU9 68 aa9.52□□□□□ -0.89
ERCC4-208ENST00000576348 FAM240AA0A1B0GVK7 77 aa9.5□□□□□ -0.89
ERCC4-208ENST00000576348 RPS29P62273 56 aaKnown RBP9.5□□□□□ -0.89
ERCC4-208ENST00000576348 NREPQ16612 68 aa9.5□□□□□ -0.89
ERCC4-208ENST00000576348 UBL5Q9BZL1 73 aa9.5□□□□□ -0.89
ERCC4-208ENST00000576348 LINC00846Q9NV44 126 aa9.47□□□□□ -0.89
ERCC4-208ENST00000576348 Q5XG85 94 aa9.46□□□□□ -0.9
ERCC4-208ENST00000576348 ASB16-AS1Q495Z4 193 aa9.43□□□□□ -0.9
ERCC4-208ENST00000576348 Q6ZVQ6 151 aa9.43□□□□□ -0.9
ERCC4-208ENST00000576348 SIGMAR1Q99720 223 aa9.4□□□□□ -0.9
ERCC4-208ENST00000576348 LRP1Q07954 4544 aaKnown RBP9.39□□□□□ -0.91
ERCC4-208ENST00000576348 BPY2O14599 106 aa9.39□□□□□ -0.91
ERCC4-208ENST00000576348 FAT3Q8TDW7 4589 aa9.39□□□□□ -0.91
ERCC4-208ENST00000576348 MYCBP2O75592 4640 aa9.39□□□□□ -0.91
ERCC4-208ENST00000576348 J3KT08 172 aa9.38□□□□□ -0.91
ERCC4-208ENST00000576348 IGKV4-1P06312 121 aa9.38□□□□□ -0.91
ERCC4-208ENST00000576348 DEFB116Q30KQ4 102 aa9.38□□□□□ -0.91
ERCC4-208ENST00000576348 C1orf195Q5TG92 126 aa9.38□□□□□ -0.91
ERCC4-208ENST00000576348 ABCA13Q86UQ4 5058 aa9.38□□□□□ -0.91
ERCC4-208ENST00000576348 RETNLBQ9BQ08 111 aa9.37□□□□□ -0.91
ERCC4-208ENST00000576348 LINC00472Q9H8W2 130 aa9.36□□□□□ -0.91
ERCC4-208ENST00000576348 DMBT1Q9UGM3 2413 aaPredicted RBP9.34□□□□□ -0.91
ERCC4-208ENST00000576348 Q96NJ1 140 aa9.34□□□□□ -0.91
ERCC4-208ENST00000576348 LINC00643Q86TS7 51 aa9.33□□□□□ -0.92
ERCC4-208ENST00000576348 NDUFB1O75438 58 aa9.32□□□□□ -0.92
ERCC4-208ENST00000576348 ATP5EP2Q5VTU8 51 aa9.32□□□□□ -0.92
ERCC4-208ENST00000576348 TNXBP22105 4242 aa9.3□□□□□ -0.92
ERCC4-208ENST00000576348 IGKV3D-7A0A0C4DH55 119 aa9.3□□□□□ -0.92
ERCC4-208ENST00000576348 PRR4Q16378 134 aa9.3□□□□□ -0.92
ERCC4-208ENST00000576348 CDIP1Q9H305 208 aa9.3□□□□□ -0.92
ERCC4-208ENST00000576348 FP248Q71RG6 208 aaPredicted RBP9.29□□□□□ -0.92
ERCC4-208ENST00000576348 A8MWP4 228 aa9.28□□□□□ -0.92
ERCC4-208ENST00000576348 CXCL6P80162 114 aa9.28□□□□□ -0.92
ERCC4-208ENST00000576348 IGLV7-46A0A075B6I9 117 aa9.26□□□□□ -0.93
ERCC4-208ENST00000576348 IGHV6-1A0A0B4J1U7 121 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms