RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 SMIM29Q86T20 159 aa4.23□□□□□ -1.73
SMG6-217ENST00000575338 TRAV7A0A075B6U4 112 aa4.22□□□□□ -1.73
SMG6-217ENST00000575338 IGFL1Q6UW32 110 aa4.22□□□□□ -1.73
SMG6-217ENST00000575338 KRTAP13-1Q8IUC0 172 aa4.22□□□□□ -1.73
SMG6-217ENST00000575338 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.22□□□□□ -1.73
SMG6-217ENST00000575338 PLECQ15149 4684 aaKnown RBP4.22□□□□□ -1.73
SMG6-217ENST00000575338 LYSTQ99698 3801 aa4.21□□□□□ -1.73
SMG6-217ENST00000575338 CCDC179H3BU77 68 aa4.21□□□□□ -1.74
SMG6-217ENST00000575338 SS18L2Q9UHA2 77 aa4.21□□□□□ -1.74
SMG6-217ENST00000575338 J3KT08 172 aa4.2□□□□□ -1.74
SMG6-217ENST00000575338 ZNF861PO60384 105 aa4.2□□□□□ -1.74
SMG6-217ENST00000575338 VPS13DQ5THJ4 4388 aa4.2□□□□□ -1.74
SMG6-217ENST00000575338 PANO1I0J062 215 aa4.19□□□□□ -1.74
SMG6-217ENST00000575338 LINC00483Q53H64 154 aa4.19□□□□□ -1.74
SMG6-217ENST00000575338 PSORS1C2Q9UIG4 136 aa4.19□□□□□ -1.74
SMG6-217ENST00000575338 STARD9Q9P2P6 4700 aa4.19□□□□□ -1.74
SMG6-217ENST00000575338 DNAH10Q8IVF4 4471 aa4.18□□□□□ -1.74
SMG6-217ENST00000575338 TENM2Q9NT68 2774 aa4.18□□□□□ -1.74
SMG6-217ENST00000575338 NDUFC1O43677 76 aa4.18□□□□□ -1.74
SMG6-217ENST00000575338 IGKV4-1P06312 121 aa4.18□□□□□ -1.74
SMG6-217ENST00000575338 SCXQ7RTU7 201 aa4.18□□□□□ -1.74
SMG6-217ENST00000575338 KRTAP11-1Q8IUC1 163 aa4.18□□□□□ -1.74
SMG6-217ENST00000575338 A0A087WSZ3 146 aa4.17□□□□□ -1.74
SMG6-217ENST00000575338 TMEM258P61165 79 aa4.17□□□□□ -1.74
SMG6-217ENST00000575338 DNAH6Q9C0G6 4158 aa4.17□□□□□ -1.74
SMG6-217ENST00000575338 NDUFB1O75438 58 aa4.16□□□□□ -1.74
SMG6-217ENST00000575338 IGLV7-43P04211 117 aa4.16□□□□□ -1.74
SMG6-217ENST00000575338 LINC00336Q6ZUF6 198 aa4.16□□□□□ -1.74
SMG6-217ENST00000575338 IGLV9-49A0A0B4J1Y8 123 aa4.14□□□□□ -1.75
SMG6-217ENST00000575338 HCG22E2RYF7 251 aa4.14□□□□□ -1.75
SMG6-217ENST00000575338 KLKP1Q107X0 134 aa4.14□□□□□ -1.75
SMG6-217ENST00000575338 Q6ZSA8 131 aa4.14□□□□□ -1.75
SMG6-217ENST00000575338 A8MWP4 228 aa4.13□□□□□ -1.75
SMG6-217ENST00000575338 ATP5EP56381 51 aaPredicted RBP4.13□□□□□ -1.75
SMG6-217ENST00000575338 DSCR10P59022 87 aa4.13□□□□□ -1.75
SMG6-217ENST00000575338 CD164Q04900 197 aa4.13□□□□□ -1.75
SMG6-217ENST00000575338 SSBP3-AS1Q7Z2R9 100 aa4.13□□□□□ -1.75
SMG6-217ENST00000575338 C20orf197Q8N268 126 aa4.13□□□□□ -1.75
SMG6-217ENST00000575338 ALMS1Q8TCU4 4167 aa4.13□□□□□ -1.75
SMG6-217ENST00000575338 KMT2CQ8NEZ4 4911 aaKnown RBP4.12□□□□□ -1.75
SMG6-217ENST00000575338 CDK2AP2O75956 126 aa4.12□□□□□ -1.75
SMG6-217ENST00000575338 FAM229BQ4G0N7 80 aa4.12□□□□□ -1.75
SMG6-217ENST00000575338 Q8N9L7 120 aa4.12□□□□□ -1.75
SMG6-217ENST00000575338 CIRBP-AS1Q8TBR5 109 aa4.12□□□□□ -1.75
SMG6-217ENST00000575338 K7EQZ3 153 aa4.11□□□□□ -1.75
SMG6-217ENST00000575338 KRTAP10-2P60368 255 aa4.11□□□□□ -1.75
SMG6-217ENST00000575338 MOBPQ13875 183 aa4.11□□□□□ -1.75
SMG6-217ENST00000575338 C5orf47Q569G3 176 aa4.11□□□□□ -1.75
SMG6-217ENST00000575338 PRR15Q8IV56 129 aa4.11□□□□□ -1.75
SMG6-217ENST00000575338 OCR1Q9BZK8 76 aa4.11□□□□□ -1.75
SMG6-217ENST00000575338 LINC00472Q9H8W2 130 aa4.11□□□□□ -1.75
SMG6-217ENST00000575338 TMEM254Q8TBM7 123 aa4.1□□□□□ -1.75
SMG6-217ENST00000575338 DNAH17Q9UFH2 4485 aa4.1□□□□□ -1.75
SMG6-217ENST00000575338 HECTD4Q9Y4D8 3996 aa4.1□□□□□ -1.75
SMG6-217ENST00000575338 LCE6AA0A183 80 aa4.09□□□□□ -1.75
SMG6-217ENST00000575338 H3BPC8 53 aa4.09□□□□□ -1.75
SMG6-217ENST00000575338 MP68P56378 58 aa4.09□□□□□ -1.75
SMG6-217ENST00000575338 CASC2Q6XLA1 102 aa4.09□□□□□ -1.75
SMG6-217ENST00000575338 KMT2AQ03164 3969 aa4.09□□□□□ -1.75
SMG6-217ENST00000575338 KRTAP10-1P60331 282 aa4.08□□□□□ -1.76
SMG6-217ENST00000575338 RPS28P62857 69 aaKnown RBP4.08□□□□□ -1.76
SMG6-217ENST00000575338 DNAH2Q9P225 4427 aa4.07□□□□□ -1.76
SMG6-217ENST00000575338 A0A0G2JQZ4 141 aa4.07□□□□□ -1.76
SMG6-217ENST00000575338 FAM236DA0A1B0GTK5 79 aa4.07□□□□□ -1.76
SMG6-217ENST00000575338 FAM236CP0DP71 79 aa4.07□□□□□ -1.76
SMG6-217ENST00000575338 ASB16-AS1Q495Z4 193 aa4.07□□□□□ -1.76
SMG6-217ENST00000575338 LIMD2Q9BT23 127 aa4.07□□□□□ -1.76
SMG6-217ENST00000575338 TP53AIP1Q9HCN2 124 aa4.07□□□□□ -1.76
SMG6-217ENST00000575338 FAM30AQ9NZY2 134 aa4.07□□□□□ -1.76
SMG6-217ENST00000575338 DEFB116Q30KQ4 102 aa4.06□□□□□ -1.76
SMG6-217ENST00000575338 WFDC13Q8IUB5 93 aa4.06□□□□□ -1.76
SMG6-217ENST00000575338 RYR3Q15413 4870 aa4.05□□□□□ -1.76
SMG6-217ENST00000575338 A0A0U1RQV1 116 aa4.05□□□□□ -1.76
SMG6-217ENST00000575338 hDV103S1A0JD37 113 aa4.05□□□□□ -1.76
SMG6-217ENST00000575338 H7BZZ5 65 aa4.05□□□□□ -1.76
SMG6-217ENST00000575338 HRCT1Q6UXD1 115 aa4.05□□□□□ -1.76
SMG6-217ENST00000575338 FRAS1Q86XX4 4008 aa4.05□□□□□ -1.76
SMG6-217ENST00000575338 A0A1B0GVX0 72 aa4.04□□□□□ -1.76
SMG6-217ENST00000575338 KRTAP29-1A8MX34 341 aaPredicted RBP4.04□□□□□ -1.76
SMG6-217ENST00000575338 C8orf87E5RJ46 101 aa4.04□□□□□ -1.76
SMG6-217ENST00000575338 C4orf48Q5BLP8 95 aa4.04□□□□□ -1.76
SMG6-217ENST00000575338 Q5XG85 94 aa4.04□□□□□ -1.76
SMG6-217ENST00000575338 SPINK6Q6UWN8 80 aa4.04□□□□□ -1.76
SMG6-217ENST00000575338 Q96NJ1 140 aa4.04□□□□□ -1.76
SMG6-217ENST00000575338 SNURFQ9Y675 71 aa4.04□□□□□ -1.76
SMG6-217ENST00000575338 MMP24-AS1A0A0U1RRL7 71 aa4.03□□□□□ -1.76
SMG6-217ENST00000575338 C8orf17Q9NRJ1 99 aa4.03□□□□□ -1.76
SMG6-217ENST00000575338 SERP1Q9Y6X1 66 aa4.03□□□□□ -1.76
SMG6-217ENST00000575338 CYSTM1Q9H1C7 97 aa4.02□□□□□ -1.77
SMG6-217ENST00000575338 TRAV22A0A0B4J277 110 aa4.01□□□□□ -1.77
SMG6-217ENST00000575338 RPS29P62273 56 aaKnown RBP4.01□□□□□ -1.77
SMG6-217ENST00000575338 SPAG11AQ6PDA7 123 aa4.01□□□□□ -1.77
SMG6-217ENST00000575338 MRPL34Q9BQ48 92 aaKnown RBP4.01□□□□□ -1.77
SMG6-217ENST00000575338 ANAPC11Q9NYG5 84 aa4.01□□□□□ -1.77
SMG6-217ENST00000575338 DNAH8Q96JB1 4490 aa4.01□□□□□ -1.77
SMG6-217ENST00000575338 IGHV6-1A0A0B4J1U7 121 aa4□□□□□ -1.77
SMG6-217ENST00000575338 H0Y9P7 68 aa4□□□□□ -1.77
SMG6-217ENST00000575338 SPINK1P00995 79 aa4□□□□□ -1.77
SMG6-217ENST00000575338 PLA2G1BP04054 148 aaKnown RBP4□□□□□ -1.77
SMG6-217ENST00000575338 TYMSOSQ8TAI1 123 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms