RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 TP53AIP1Q9HCN2 124 aa5.07□□□□□ -1.6
TOM1L1-220ENST00000575333 CR1P17927 2039 aa5.07□□□□□ -1.6
TOM1L1-220ENST00000575333 ITPR3Q14573 2671 aa5.07□□□□□ -1.6
TOM1L1-220ENST00000575333 ZNF469Q96JG9 3925 aaPredicted RBP5.07□□□□□ -1.6
TOM1L1-220ENST00000575333 UNQ6190/PRO20217Q6UXQ8 127 aa5.07□□□□□ -1.6
TOM1L1-220ENST00000575333 CREBBPQ92793 2442 aa5.06□□□□□ -1.6
TOM1L1-220ENST00000575333 REG3GQ6UW15 175 aa5.06□□□□□ -1.6
TOM1L1-220ENST00000575333 HRES1P13985 223 aa5.05□□□□□ -1.6
TOM1L1-220ENST00000575333 KRTAP10-2P60368 255 aa5.05□□□□□ -1.6
TOM1L1-220ENST00000575333 C7orf33Q8WU49 177 aa5.04□□□□□ -1.6
TOM1L1-220ENST00000575333 FLNAP21333 2647 aaKnown RBP5.04□□□□□ -1.6
TOM1L1-220ENST00000575333 ZANQ9Y493 2812 aa5.04□□□□□ -1.6
TOM1L1-220ENST00000575333 NOP10Q9NPE3 64 aaKnown RBP5.04□□□□□ -1.6
TOM1L1-220ENST00000575333 A8MWP4 228 aa5.03□□□□□ -1.6
TOM1L1-220ENST00000575333 UQCR11O14957 56 aa5.03□□□□□ -1.6
TOM1L1-220ENST00000575333 MIR22HGQ0VDD5 57 aa5.03□□□□□ -1.6
TOM1L1-220ENST00000575333 MAPK1IP1LQ8NDC0 245 aa5.03□□□□□ -1.6
TOM1L1-220ENST00000575333 HIVEP1P15822 2718 aa5.02□□□□□ -1.61
TOM1L1-220ENST00000575333 REG3AQ06141 175 aa5.02□□□□□ -1.61
TOM1L1-220ENST00000575333 EGFEM1PQ0D2K5 195 aa5.02□□□□□ -1.61
TOM1L1-220ENST00000575333 WNK1Q9H4A3 2382 aa5.02□□□□□ -1.61
TOM1L1-220ENST00000575333 DEFB105AQ8NG35 78 aa5.02□□□□□ -1.61
TOM1L1-220ENST00000575333 ACANP16112 2415 aa5.01□□□□□ -1.61
TOM1L1-220ENST00000575333 DEFB116Q30KQ4 102 aa5□□□□□ -1.61
TOM1L1-220ENST00000575333 CLPSL2Q6UWE3 100 aa5□□□□□ -1.61
TOM1L1-220ENST00000575333 C6orf48Q9UBA6 75 aa5□□□□□ -1.61
TOM1L1-220ENST00000575333 SVEP1Q4LDE5 3571 aa5□□□□□ -1.61
TOM1L1-220ENST00000575333 A0A1B0GU69 56 aa5□□□□□ -1.61
TOM1L1-220ENST00000575333 H3BUX3 64 aa5□□□□□ -1.61
TOM1L1-220ENST00000575333 CMC4P56277 68 aaPredicted RBP5□□□□□ -1.61
TOM1L1-220ENST00000575333 KRTAP25-1Q3LHN0 102 aa5□□□□□ -1.61
TOM1L1-220ENST00000575333 Q6ZRX8 168 aa5□□□□□ -1.61
TOM1L1-220ENST00000575333 SMR3AQ99954 134 aa4.99□□□□□ -1.61
TOM1L1-220ENST00000575333 F8P00451 2351 aa4.98□□□□□ -1.61
TOM1L1-220ENST00000575333 ANGP03950 147 aaKnown RBP4.98□□□□□ -1.61
TOM1L1-220ENST00000575333 LY6EQ16553 131 aa4.98□□□□□ -1.61
TOM1L1-220ENST00000575333 PCOTHQ58A44 107 aa4.98□□□□□ -1.61
TOM1L1-220ENST00000575333 TLN2Q9Y4G6 2542 aa4.98□□□□□ -1.61
TOM1L1-220ENST00000575333 ABCA2Q9BZC7 2435 aa4.98□□□□□ -1.61
TOM1L1-220ENST00000575333 TEP1Q99973 2627 aaKnown RBP4.98□□□□□ -1.61
TOM1L1-220ENST00000575333 IGLV8-61A0A075B6I0 122 aa4.97□□□□□ -1.61
TOM1L1-220ENST00000575333 ZNF861PO60384 105 aa4.97□□□□□ -1.61
TOM1L1-220ENST00000575333 ACYP2P14621 99 aa4.97□□□□□ -1.61
TOM1L1-220ENST00000575333 BRD3OSQ6XYD6 125 aa4.97□□□□□ -1.61
TOM1L1-220ENST00000575333 CSPG4Q6UVK1 2322 aa4.97□□□□□ -1.61
TOM1L1-220ENST00000575333 IGKV2-24A0A0C4DH68 120 aa4.97□□□□□ -1.61
TOM1L1-220ENST00000575333 RPL37AP8A6NKH3 93 aa4.97□□□□□ -1.61
TOM1L1-220ENST00000575333 CSNK1G2-AS1Q8NCQ2 148 aa4.96□□□□□ -1.62
TOM1L1-220ENST00000575333 NIPBLQ6KC79 2804 aaeCLIP4.96□□□□□ -1.62
TOM1L1-220ENST00000575333 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.95□□□□□ -1.621e-6■□□□□ 10.1
TOM1L1-220ENST00000575333 ANK3Q12955 4377 aaKnown RBP4.95□□□□□ -1.62
TOM1L1-220ENST00000575333 IGLV10-54A0A075B6I4 117 aa4.95□□□□□ -1.62
TOM1L1-220ENST00000575333 MSMBP08118 114 aa4.95□□□□□ -1.62
TOM1L1-220ENST00000575333 KRTAP1-1Q07627 177 aa4.95□□□□□ -1.62
TOM1L1-220ENST00000575333 MTORP42345 2549 aa4.95□□□□□ -1.62
TOM1L1-220ENST00000575333 MMP24-AS1A0A0U1RRL7 71 aa4.94□□□□□ -1.62
TOM1L1-220ENST00000575333 SPRR1AP35321 89 aa4.94□□□□□ -1.62
TOM1L1-220ENST00000575333 PRR34Q9NV39 138 aa4.94□□□□□ -1.62
TOM1L1-220ENST00000575333 PRO0255Q9UI72 69 aa4.94□□□□□ -1.62
TOM1L1-220ENST00000575333 NSD1Q96L73 2696 aaPredicted RBP4.94□□□□□ -1.62
TOM1L1-220ENST00000575333 SONP18583 2426 aaKnown RBP4.94□□□□□ -1.62
TOM1L1-220ENST00000575333 MXRA5Q9NR99 2828 aa4.93□□□□□ -1.62
TOM1L1-220ENST00000575333 A0A087WSZ3 146 aa4.93□□□□□ -1.62
TOM1L1-220ENST00000575333 CAMK2N2Q96S95 79 aa4.93□□□□□ -1.62
TOM1L1-220ENST00000575333 HIVEP2P31629 2446 aa4.93□□□□□ -1.62
TOM1L1-220ENST00000575333 INAFM1C9JVW0 142 aa4.93□□□□□ -1.62
TOM1L1-220ENST00000575333 IGFL1Q6UW32 110 aa4.93□□□□□ -1.62
TOM1L1-220ENST00000575333 KRTAP4-8A0A0G2JLE6 195 aa4.92□□□□□ -1.62
TOM1L1-220ENST00000575333 KRTAP4-16G5E9R7 235 aaPredicted RBP4.92□□□□□ -1.62
TOM1L1-220ENST00000575333 Q8N1X5 172 aa4.92□□□□□ -1.62
TOM1L1-220ENST00000575333 KRTAP17-1Q9BYP8 105 aa4.92□□□□□ -1.62
TOM1L1-220ENST00000575333 CUBNO60494 3623 aa4.92□□□□□ -1.62
TOM1L1-220ENST00000575333 SETD2Q9BYW2 2564 aaPredicted RBP4.92□□□□□ -1.62
TOM1L1-220ENST00000575333 NF1P21359 2839 aa4.91□□□□□ -1.62
TOM1L1-220ENST00000575333 KRTAP16-1A8MUX0 517 aa4.91□□□□□ -1.62
TOM1L1-220ENST00000575333 LINC00483Q53H64 154 aa4.9□□□□□ -1.62
TOM1L1-220ENST00000575333 FN1P02751 2386 aaKnown RBP4.9□□□□□ -1.63
TOM1L1-220ENST00000575333 RPL37AP61513 92 aaKnown RBP4.9□□□□□ -1.63
TOM1L1-220ENST00000575333 LINC00472Q9H8W2 130 aa4.9□□□□□ -1.63
TOM1L1-220ENST00000575333 C4orf3Q8WVX3 66 aa4.89□□□□□ -1.63
TOM1L1-220ENST00000575333 P0C880 135 aa4.88□□□□□ -1.63
TOM1L1-220ENST00000575333 DMAC1Q96GE9 116 aa4.88□□□□□ -1.63
TOM1L1-220ENST00000575333 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
TOM1L1-220ENST00000575333 LELP1Q5T871 98 aa4.87□□□□□ -1.63
TOM1L1-220ENST00000575333 Q6YL49 198 aa4.87□□□□□ -1.63
TOM1L1-220ENST00000575333 KRTAP9-3Q9BYQ3 159 aa4.87□□□□□ -1.63
TOM1L1-220ENST00000575333 IGLV5-52A0A0A0MRZ9 124 aa4.86□□□□□ -1.63
TOM1L1-220ENST00000575333 GIG44P09565 113 aaPredicted RBP4.86□□□□□ -1.63
TOM1L1-220ENST00000575333 C10orf99Q6UWK7 81 aa4.86□□□□□ -1.63
TOM1L1-220ENST00000575333 JMJD1CQ15652 2540 aa4.86□□□□□ -1.63
TOM1L1-220ENST00000575333 DEFB136Q30KP8 78 aa4.85□□□□□ -1.63
TOM1L1-220ENST00000575333 TLX1NBP0CAT3 122 aa4.84□□□□□ -1.63
TOM1L1-220ENST00000575333 FAM168BA1KXE4 195 aa4.83□□□□□ -1.64
TOM1L1-220ENST00000575333 IGLV7-43P04211 117 aa4.83□□□□□ -1.64
TOM1L1-220ENST00000575333 DEFB130BP0DP73 79 aa4.83□□□□□ -1.64
TOM1L1-220ENST00000575333 DEFB130AP0DP74 79 aa4.83□□□□□ -1.64
TOM1L1-220ENST00000575333 A8MUU9 505 aa4.83□□□□□ -1.64
TOM1L1-220ENST00000575333 C2CD3Q4AC94 2353 aa4.83□□□□□ -1.64
TOM1L1-220ENST00000575333 C8orf17Q9NRJ1 99 aa4.82□□□□□ -1.64
TOM1L1-220ENST00000575333 FBN1P35555 2871 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms