RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 A0A087WVE0 104 aa11.66□□□□□ -0.54
SPNS3-204ENST00000575194 BCE1O60756 84 aa11.66□□□□□ -0.54
SPNS3-204ENST00000575194 PANO1I0J062 215 aa11.65□□□□□ -0.54
SPNS3-204ENST00000575194 KRTAP11-1Q8IUC1 163 aa11.65□□□□□ -0.54
SPNS3-204ENST00000575194 HECTD4Q9Y4D8 3996 aa11.65□□□□□ -0.55
SPNS3-204ENST00000575194 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.64□□□□□ -0.55
SPNS3-204ENST00000575194 SMIM29Q86T20 159 aa11.63□□□□□ -0.55
SPNS3-204ENST00000575194 Q8NBF4 154 aa11.63□□□□□ -0.55
SPNS3-204ENST00000575194 NREPQ16612 68 aa11.63□□□□□ -0.55
SPNS3-204ENST00000575194 DNAH11Q96DT5 4516 aa11.62□□□□□ -0.55
SPNS3-204ENST00000575194 IGLV5-52A0A0A0MRZ9 124 aa11.62□□□□□ -0.55
SPNS3-204ENST00000575194 PKD1P98161 4303 aa11.61□□□□□ -0.55
SPNS3-204ENST00000575194 CCDC179H3BU77 68 aa11.6□□□□□ -0.55
SPNS3-204ENST00000575194 IGLV8-61A0A075B6I0 122 aa11.6□□□□□ -0.55
SPNS3-204ENST00000575194 A0A1W2PNM2 257 aa11.6□□□□□ -0.55
SPNS3-204ENST00000575194 SPRR1BP22528 89 aa11.6□□□□□ -0.55
SPNS3-204ENST00000575194 SPRR4Q96PI1 79 aa11.59□□□□□ -0.55
SPNS3-204ENST00000575194 UQCRQO14949 82 aa11.57□□□□□ -0.56
SPNS3-204ENST00000575194 KRTAP13-1Q8IUC0 172 aa11.57□□□□□ -0.56
SPNS3-204ENST00000575194 PLAC8Q9NZF1 115 aa11.57□□□□□ -0.56
SPNS3-204ENST00000575194 LINC00336Q6ZUF6 198 aa11.56□□□□□ -0.56
SPNS3-204ENST00000575194 COX7CP15954 63 aa11.55□□□□□ -0.56
SPNS3-204ENST00000575194 BPY2O14599 106 aa11.54□□□□□ -0.56
SPNS3-204ENST00000575194 CRYGAP11844 174 aa11.54□□□□□ -0.56
SPNS3-204ENST00000575194 SCXQ7RTU7 201 aa11.54□□□□□ -0.56
SPNS3-204ENST00000575194 IGFL1Q6UW32 110 aa11.53□□□□□ -0.56
SPNS3-204ENST00000575194 SERP2Q8N6R1 65 aa11.53□□□□□ -0.56
SPNS3-204ENST00000575194 DNAH5Q8TE73 4624 aa11.51□□□□□ -0.57
SPNS3-204ENST00000575194 C9orf153Q5TBE3 101 aa11.49□□□□□ -0.57
SPNS3-204ENST00000575194 SMIM20Q8N5G0 67 aa11.49□□□□□ -0.57
SPNS3-204ENST00000575194 ZNF706Q9Y5V0 76 aaPredicted RBP11.49□□□□□ -0.57
SPNS3-204ENST00000575194 KRTAP10-2P60368 255 aa11.49□□□□□ -0.57
SPNS3-204ENST00000575194 PKHD1P08F94 4074 aa11.48□□□□□ -0.57
SPNS3-204ENST00000575194 A0A1B0GVY2 172 aa11.46□□□□□ -0.58
SPNS3-204ENST00000575194 PSORS1C2Q9UIG4 136 aa11.46□□□□□ -0.58
SPNS3-204ENST00000575194 IGKV4-1P06312 121 aa11.45□□□□□ -0.58
SPNS3-204ENST00000575194 LINC00483Q53H64 154 aa11.42□□□□□ -0.58
SPNS3-204ENST00000575194 TRAV7A0A075B6U4 112 aa11.41□□□□□ -0.58
SPNS3-204ENST00000575194 ZNF861PO60384 105 aa11.4□□□□□ -0.58
SPNS3-204ENST00000575194 Q8N9L7 120 aa11.4□□□□□ -0.58
SPNS3-204ENST00000575194 A0A087WSZ3 146 aa11.38□□□□□ -0.59
SPNS3-204ENST00000575194 A0A0G2JQZ4 141 aa11.38□□□□□ -0.59
SPNS3-204ENST00000575194 RPL37AP61513 92 aaKnown RBP11.38□□□□□ -0.59
SPNS3-204ENST00000575194 DNAH8Q96JB1 4490 aa11.34□□□□□ -0.59
SPNS3-204ENST00000575194 DYNC1H1Q14204 4646 aaKnown RBP11.34□□□□□ -0.59
SPNS3-204ENST00000575194 LRP1BQ9NZR2 4599 aa11.34□□□□□ -0.59
SPNS3-204ENST00000575194 DSCR10P59022 87 aa11.33□□□□□ -0.6
SPNS3-204ENST00000575194 IGLV7-43P04211 117 aa11.32□□□□□ -0.6
SPNS3-204ENST00000575194 KRTAP10-1P60331 282 aa11.32□□□□□ -0.6
SPNS3-204ENST00000575194 IGLV9-49A0A0B4J1Y8 123 aa11.32□□□□□ -0.6
SPNS3-204ENST00000575194 SS18L2Q9UHA2 77 aa11.32□□□□□ -0.6
SPNS3-204ENST00000575194 CIRBP-AS1Q8TBR5 109 aa11.3□□□□□ -0.6
SPNS3-204ENST00000575194 Q6ZSA8 131 aa11.29□□□□□ -0.6
SPNS3-204ENST00000575194 K7EQZ3 153 aa11.28□□□□□ -0.6
SPNS3-204ENST00000575194 FAM30AQ9NZY2 134 aa11.28□□□□□ -0.6
SPNS3-204ENST00000575194 EPPK1P58107 5090 aaKnown RBP11.28□□□□□ -0.6
SPNS3-204ENST00000575194 C20orf197Q8N268 126 aa11.25□□□□□ -0.61
SPNS3-204ENST00000575194 J3KT08 172 aa11.23□□□□□ -0.61
SPNS3-204ENST00000575194 MOBPQ13875 183 aa11.23□□□□□ -0.61
SPNS3-204ENST00000575194 HCG22E2RYF7 251 aa11.23□□□□□ -0.61
SPNS3-204ENST00000575194 TMEM258P61165 79 aa11.23□□□□□ -0.61
SPNS3-204ENST00000575194 OCR1Q9BZK8 76 aa11.23□□□□□ -0.61
SPNS3-204ENST00000575194 LINC00472Q9H8W2 130 aa11.23□□□□□ -0.61
SPNS3-204ENST00000575194 DEFB116Q30KQ4 102 aa11.21□□□□□ -0.61
SPNS3-204ENST00000575194 KLKP1Q107X0 134 aa11.2□□□□□ -0.62
SPNS3-204ENST00000575194 APOBP04114 4563 aaKnown RBP11.19□□□□□ -0.62
SPNS3-204ENST00000575194 A8MWP4 228 aa11.19□□□□□ -0.62
SPNS3-204ENST00000575194 CYSTM1Q9H1C7 97 aa11.19□□□□□ -0.62
SPNS3-204ENST00000575194 SRRM2Q9UQ35 2752 aaKnown RBP11.19□□□□□ -0.62
SPNS3-204ENST00000575194 PRR15Q8IV56 129 aa11.16□□□□□ -0.62
SPNS3-204ENST00000575194 ANAPC11Q9NYG5 84 aa11.16□□□□□ -0.62
SPNS3-204ENST00000575194 NDUFC1O43677 76 aa11.14□□□□□ -0.63
SPNS3-204ENST00000575194 TMEM254Q8TBM7 123 aa11.14□□□□□ -0.63
SPNS3-204ENST00000575194 NDUFB1O75438 58 aa11.13□□□□□ -0.63
SPNS3-204ENST00000575194 HRCT1Q6UXD1 115 aa11.13□□□□□ -0.63
SPNS3-204ENST00000575194 CD164Q04900 197 aa11.11□□□□□ -0.63
SPNS3-204ENST00000575194 SSBP3-AS1Q7Z2R9 100 aa11.11□□□□□ -0.63
SPNS3-204ENST00000575194 SNURFQ9Y675 71 aa11.1□□□□□ -0.63
SPNS3-204ENST00000575194 WFDC13Q8IUB5 93 aa11.09□□□□□ -0.63
SPNS3-204ENST00000575194 Q96NJ1 140 aa11.09□□□□□ -0.63
SPNS3-204ENST00000575194 FAM229BQ4G0N7 80 aa11.08□□□□□ -0.64
SPNS3-204ENST00000575194 CASC2Q6XLA1 102 aa11.08□□□□□ -0.64
SPNS3-204ENST00000575194 KRTAP29-1A8MX34 341 aaPredicted RBP11.07□□□□□ -0.64
SPNS3-204ENST00000575194 H7BZZ5 65 aa11.07□□□□□ -0.64
SPNS3-204ENST00000575194 A0A0U1RQV1 116 aa11.06□□□□□ -0.64
SPNS3-204ENST00000575194 KIAA1109Q2LD37 5005 aa11.05□□□□□ -0.64
SPNS3-204ENST00000575194 RYR1P21817 5038 aa11.05□□□□□ -0.64
SPNS3-204ENST00000575194 CDK2AP2O75956 126 aa11.04□□□□□ -0.64
SPNS3-204ENST00000575194 C5orf47Q569G3 176 aa11.04□□□□□ -0.64
SPNS3-204ENST00000575194 VPS13BQ7Z7G8 4022 aa11.03□□□□□ -0.64
SPNS3-204ENST00000575194 HSPG2P98160 4391 aa11.03□□□□□ -0.64
SPNS3-204ENST00000575194 FAM236DA0A1B0GTK5 79 aa11.03□□□□□ -0.64
SPNS3-204ENST00000575194 FAM236CP0DP71 79 aa11.03□□□□□ -0.64
SPNS3-204ENST00000575194 FAT1Q14517 4588 aa11.02□□□□□ -0.65
SPNS3-204ENST00000575194 MMP24-AS1A0A0U1RRL7 71 aa11.01□□□□□ -0.65
SPNS3-204ENST00000575194 ATP5EP56381 51 aaPredicted RBP11□□□□□ -0.65
SPNS3-204ENST00000575194 A0A1B0GVX0 72 aa10.98□□□□□ -0.65
SPNS3-204ENST00000575194 RPS28P62857 69 aaKnown RBP10.98□□□□□ -0.65
SPNS3-204ENST00000575194 hDV103S1A0JD37 113 aa10.98□□□□□ -0.65
SPNS3-204ENST00000575194 ASB16-AS1Q495Z4 193 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms