RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 UBL5Q9BZL1 73 aa17.83■□□□□ 0.44
CTDNEP1-208ENST00000573600 SCGB1A1P11684 91 aa17.82■□□□□ 0.44
CTDNEP1-208ENST00000573600 ZNF861PO60384 105 aa17.81■□□□□ 0.44
CTDNEP1-208ENST00000573600 IGLV8-61A0A075B6I0 122 aa17.78■□□□□ 0.44
CTDNEP1-208ENST00000573600 Q6Q795 121 aa17.78■□□□□ 0.44
CTDNEP1-208ENST00000573600 Q6JHZ5 121 aa17.78■□□□□ 0.44
CTDNEP1-208ENST00000573600 TRBV7-7A0A0K0K1E9 115 aa17.77■□□□□ 0.44
CTDNEP1-208ENST00000573600 ZNF706Q9Y5V0 76 aaPredicted RBP17.77■□□□□ 0.44
CTDNEP1-208ENST00000573600 A0A1B0GW54 56 aa17.76■□□□□ 0.43
CTDNEP1-208ENST00000573600 IMUPQ9GZP8 106 aa17.75■□□□□ 0.43
CTDNEP1-208ENST00000573600 IGLV7-43P04211 117 aa17.74■□□□□ 0.43
CTDNEP1-208ENST00000573600 SPRR4Q96PI1 79 aa17.74■□□□□ 0.43
CTDNEP1-208ENST00000573600 ATP5EP2Q5VTU8 51 aa17.71■□□□□ 0.43
CTDNEP1-208ENST00000573600 Q8NBF4 154 aa17.71■□□□□ 0.43
CTDNEP1-208ENST00000573600 A0A1W2PNM2 257 aa17.7■□□□□ 0.42
CTDNEP1-208ENST00000573600 LINC00483Q53H64 154 aa17.69■□□□□ 0.42
CTDNEP1-208ENST00000573600 Q6ZVQ6 151 aa17.69■□□□□ 0.42
CTDNEP1-208ENST00000573600 A0A1B0GVY2 172 aa17.68■□□□□ 0.42
CTDNEP1-208ENST00000573600 IGFL1Q6UW32 110 aa17.67■□□□□ 0.42
CTDNEP1-208ENST00000573600 IGKV3D-7A0A0C4DH55 119 aa17.65■□□□□ 0.42
CTDNEP1-208ENST00000573600 KMT2CQ8NEZ4 4911 aaKnown RBP17.65■□□□□ 0.42
CTDNEP1-208ENST00000573600 HAMPP81172 84 aa17.64■□□□□ 0.41
CTDNEP1-208ENST00000573600 PCP4P48539 62 aa17.61■□□□□ 0.41
CTDNEP1-208ENST00000573600 RYR2Q92736 4967 aa17.61■□□□□ 0.41
CTDNEP1-208ENST00000573600 CRYGAP11844 174 aa17.6■□□□□ 0.41
CTDNEP1-208ENST00000573600 NREPQ16612 68 aa17.58■□□□□ 0.41
CTDNEP1-208ENST00000573600 CXCL6P80162 114 aa17.55■□□□□ 0.4
CTDNEP1-208ENST00000573600 RPL37AP61513 92 aaKnown RBP17.54■□□□□ 0.4
CTDNEP1-208ENST00000573600 A0A0G2JQZ4 141 aa17.53■□□□□ 0.4
CTDNEP1-208ENST00000573600 SRRM2Q9UQ35 2752 aaKnown RBP17.52■□□□□ 0.39
CTDNEP1-208ENST00000573600 IGLV9-49A0A0B4J1Y8 123 aa17.5■□□□□ 0.39
CTDNEP1-208ENST00000573600 C9orf153Q5TBE3 101 aa17.5■□□□□ 0.39
CTDNEP1-208ENST00000573600 HIST1H4AP62805 103 aaKnown RBP17.46■□□□□ 0.39
CTDNEP1-208ENST00000573600 RYR3Q15413 4870 aa17.43■□□□□ 0.38
CTDNEP1-208ENST00000573600 ANAPC11Q9NYG5 84 aa17.43■□□□□ 0.38
CTDNEP1-208ENST00000573600 FAM236AA0A1B0GUQ0 79 aa17.42■□□□□ 0.38
CTDNEP1-208ENST00000573600 FAM236BA0A1B0GV22 79 aa17.42■□□□□ 0.38
CTDNEP1-208ENST00000573600 LRP1BQ9NZR2 4599 aa17.41■□□□□ 0.38
CTDNEP1-208ENST00000573600 A0A087WSZ3 146 aa17.41■□□□□ 0.38
CTDNEP1-208ENST00000573600 BPY2O14599 106 aa17.41■□□□□ 0.38
CTDNEP1-208ENST00000573600 MOBPQ13875 183 aa17.39■□□□□ 0.37
CTDNEP1-208ENST00000573600 PKHD1P08F94 4074 aa17.38■□□□□ 0.37
CTDNEP1-208ENST00000573600 A0A087WVE0 104 aa17.38■□□□□ 0.37
CTDNEP1-208ENST00000573600 DYNC1H1Q14204 4646 aaKnown RBP17.35■□□□□ 0.37
CTDNEP1-208ENST00000573600 ANAPC13Q9BS18 74 aa17.33■□□□□ 0.36
CTDNEP1-208ENST00000573600 FAM229BQ4G0N7 80 aa17.3■□□□□ 0.36
CTDNEP1-208ENST00000573600 SSBP3-AS1Q7Z2R9 100 aa17.27■□□□□ 0.36
CTDNEP1-208ENST00000573600 ATOX1O00244 68 aa17.24■□□□□ 0.35
CTDNEP1-208ENST00000573600 SPINK6Q6UWN8 80 aa17.24■□□□□ 0.35
CTDNEP1-208ENST00000573600 SMR3BP02814 79 aaPredicted RBP17.23■□□□□ 0.35
CTDNEP1-208ENST00000573600 IGKV4-1P06312 121 aa17.23■□□□□ 0.35
CTDNEP1-208ENST00000573600 SS18L2Q9UHA2 77 aa17.21■□□□□ 0.35
CTDNEP1-208ENST00000573600 VPS13BQ7Z7G8 4022 aa17.21■□□□□ 0.35
CTDNEP1-208ENST00000573600 HRCT1Q6UXD1 115 aa17.2■□□□□ 0.34
CTDNEP1-208ENST00000573600 Q8N9L7 120 aa17.2■□□□□ 0.34
CTDNEP1-208ENST00000573600 KRTAP1-4P0C5Y4 121 aa17.19■□□□□ 0.34
CTDNEP1-208ENST00000573600 DSCR10P59022 87 aa17.19■□□□□ 0.34
CTDNEP1-208ENST00000573600 CD164Q04900 197 aa17.18■□□□□ 0.34
CTDNEP1-208ENST00000573600 LINC00472Q9H8W2 130 aa17.18■□□□□ 0.34
CTDNEP1-208ENST00000573600 A0A087X002 238 aa17.16■□□□□ 0.34
CTDNEP1-208ENST00000573600 APOBP04114 4563 aaKnown RBP17.15■□□□□ 0.34
CTDNEP1-208ENST00000573600 KRTAP13-2Q52LG2 175 aa17.14■□□□□ 0.33
CTDNEP1-208ENST00000573600 DEFB116Q30KQ4 102 aa17.13■□□□□ 0.33
CTDNEP1-208ENST00000573600 J3KT08 172 aa17.1■□□□□ 0.33
CTDNEP1-208ENST00000573600 PLA2G1BP04054 148 aaKnown RBP17.1■□□□□ 0.33
CTDNEP1-208ENST00000573600 K7EQZ3 153 aa17.09■□□□□ 0.33
CTDNEP1-208ENST00000573600 KRTAP10-4P60372 401 aaPredicted RBP17.07■□□□□ 0.32
CTDNEP1-208ENST00000573600 Q96NJ1 140 aa17.04■□□□□ 0.32
CTDNEP1-208ENST00000573600 A8MWP4 228 aa17.01■□□□□ 0.31
CTDNEP1-208ENST00000573600 SMIM20Q8N5G0 67 aa17■□□□□ 0.31
CTDNEP1-208ENST00000573600 CDK2AP2O75956 126 aa16.99■□□□□ 0.31
CTDNEP1-208ENST00000573600 SERP2Q8N6R1 65 aa16.99■□□□□ 0.31
CTDNEP1-208ENST00000573600 COX7CP15954 63 aa16.97■□□□□ 0.31
CTDNEP1-208ENST00000573600 PRR15Q8IV56 129 aa16.97■□□□□ 0.31
CTDNEP1-208ENST00000573600 TYMSOSQ8TAI1 123 aa16.97■□□□□ 0.31
CTDNEP1-208ENST00000573600 FAM229AH3BQW9 127 aa16.95■□□□□ 0.3
CTDNEP1-208ENST00000573600 NDUFB1O75438 58 aa16.95■□□□□ 0.3
CTDNEP1-208ENST00000573600 UQCRQO14949 82 aa16.94■□□□□ 0.3
CTDNEP1-208ENST00000573600 ASB16-AS1Q495Z4 193 aa16.94■□□□□ 0.3
CTDNEP1-208ENST00000573600 HCG22E2RYF7 251 aa16.93■□□□□ 0.3
CTDNEP1-208ENST00000573600 CCDC179H3BU77 68 aa16.92■□□□□ 0.3
CTDNEP1-208ENST00000573600 Q5XG85 94 aa16.91■□□□□ 0.3
CTDNEP1-208ENST00000573600 TRAV7A0A075B6U4 112 aa16.9■□□□□ 0.3
CTDNEP1-208ENST00000573600 C4orf48Q5BLP8 95 aa16.87■□□□□ 0.29
CTDNEP1-208ENST00000573600 PRR26Q8N8Z3 221 aa16.87■□□□□ 0.29
CTDNEP1-208ENST00000573600 LIMD2Q9BT23 127 aa16.86■□□□□ 0.29
CTDNEP1-208ENST00000573600 FAT1Q14517 4588 aa16.85■□□□□ 0.29
CTDNEP1-208ENST00000573600 EPPK1P58107 5090 aaKnown RBP16.84■□□□□ 0.29
CTDNEP1-208ENST00000573600 SPINK1P00995 79 aa16.82■□□□□ 0.28
CTDNEP1-208ENST00000573600 WFDC13Q8IUB5 93 aa16.8■□□□□ 0.28
CTDNEP1-208ENST00000573600 A0A1B0GVX0 72 aa16.79■□□□□ 0.28
CTDNEP1-208ENST00000573600 OCR1Q9BZK8 76 aa16.79■□□□□ 0.28
CTDNEP1-208ENST00000573600 Q5VSD8 79 aa16.78■□□□□ 0.28
CTDNEP1-208ENST00000573600 KRTAP29-1A8MX34 341 aaPredicted RBP16.77■□□□□ 0.28
CTDNEP1-208ENST00000573600 SPAG11AQ6PDA7 123 aa16.77■□□□□ 0.28
CTDNEP1-208ENST00000573600 CASC2Q6XLA1 102 aa16.77■□□□□ 0.28
CTDNEP1-208ENST00000573600 LINC00304Q8N9R0 145 aa16.76■□□□□ 0.27
CTDNEP1-208ENST00000573600 MMP24-AS1A0A0U1RRL7 71 aa16.75■□□□□ 0.27
CTDNEP1-208ENST00000573600 RPS29P62273 56 aaKnown RBP16.73■□□□□ 0.27
CTDNEP1-208ENST00000573600 IGHV6-1A0A0B4J1U7 121 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms