RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 A0A087WSZ3 146 aa6.47□□□□□ -1.37
SMG6-213ENST00000573166 FAM30AQ9NZY2 134 aa6.47□□□□□ -1.37
SMG6-213ENST00000573166 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.47□□□□□ -1.37
SMG6-213ENST00000573166 LINC01547P58512 204 aaPredicted RBP6.46□□□□□ -1.37
SMG6-213ENST00000573166 PSORS1C2Q9UIG4 136 aa6.46□□□□□ -1.37
SMG6-213ENST00000573166 TGP01266 2768 aa6.46□□□□□ -1.38
SMG6-213ENST00000573166 PSPHP1O15172 72 aa6.46□□□□□ -1.38
SMG6-213ENST00000573166 KRTAP26-1Q6PEX3 210 aa6.46□□□□□ -1.38
SMG6-213ENST00000573166 Q6ZR54 194 aa6.45□□□□□ -1.38
SMG6-213ENST00000573166 ZNF861PO60384 105 aa6.45□□□□□ -1.38
SMG6-213ENST00000573166 TMEM254Q8TBM7 123 aa6.45□□□□□ -1.38
SMG6-213ENST00000573166 LINC00528Q8N1L1 170 aa6.44□□□□□ -1.38
SMG6-213ENST00000573166 TYMSOSQ8TAI1 123 aa6.44□□□□□ -1.38
SMG6-213ENST00000573166 CXCL6P80162 114 aa6.44□□□□□ -1.38
SMG6-213ENST00000573166 ANK3Q12955 4377 aaKnown RBP6.43□□□□□ -1.38
SMG6-213ENST00000573166 LINC00208Q96KT6 92 aa6.43□□□□□ -1.38
SMG6-213ENST00000573166 RPS28P62857 69 aaKnown RBP6.42□□□□□ -1.38
SMG6-213ENST00000573166 Q8N9L7 120 aa6.42□□□□□ -1.38
SMG6-213ENST00000573166 TENM2Q9NT68 2774 aa6.42□□□□□ -1.38
SMG6-213ENST00000573166 IGLV7-43P04211 117 aa6.42□□□□□ -1.38
SMG6-213ENST00000573166 SPACA4Q8TDM5 124 aa6.41□□□□□ -1.38
SMG6-213ENST00000573166 KRTAP10-2P60368 255 aa6.4□□□□□ -1.38
SMG6-213ENST00000573166 LIMD2Q9BT23 127 aa6.4□□□□□ -1.38
SMG6-213ENST00000573166 IGLV5-37A0A075B6J1 123 aa6.4□□□□□ -1.39
SMG6-213ENST00000573166 CASC2Q6XLA1 102 aa6.4□□□□□ -1.39
SMG6-213ENST00000573166 Q8NBF4 154 aa6.4□□□□□ -1.39
SMG6-213ENST00000573166 DEFB116Q30KQ4 102 aa6.39□□□□□ -1.39
SMG6-213ENST00000573166 PRR15LQ9BU68 103 aa6.39□□□□□ -1.39
SMG6-213ENST00000573166 J3QL48 77 aa6.38□□□□□ -1.39
SMG6-213ENST00000573166 ANAPC11Q9NYG5 84 aa6.38□□□□□ -1.39
SMG6-213ENST00000573166 CYSTM1Q9H1C7 97 aa6.38□□□□□ -1.39
SMG6-213ENST00000573166 ERC2-IT1O76042 136 aa6.36□□□□□ -1.39
SMG6-213ENST00000573166 IGHV6-1A0A0B4J1U7 121 aa6.36□□□□□ -1.39
SMG6-213ENST00000573166 PLAC8Q9NZF1 115 aa6.36□□□□□ -1.39
SMG6-213ENST00000573166 KRTAP10-1P60331 282 aa6.36□□□□□ -1.39
SMG6-213ENST00000573166 TRRAPQ9Y4A5 3859 aa6.35□□□□□ -1.39
SMG6-213ENST00000573166 Q6ZQT0 140 aa6.35□□□□□ -1.39
SMG6-213ENST00000573166 Q8NDZ9 215 aa6.34□□□□□ -1.39
SMG6-213ENST00000573166 Q6ZRN7 208 aaPredicted RBP6.34□□□□□ -1.39
SMG6-213ENST00000573166 Q8N377 158 aa6.34□□□□□ -1.39
SMG6-213ENST00000573166 LOC110117498A0A087WWA1 95 aa6.33□□□□□ -1.4
SMG6-213ENST00000573166 HCG22E2RYF7 251 aa6.33□□□□□ -1.4
SMG6-213ENST00000573166 A0A1B0GW54 56 aa6.33□□□□□ -1.4
SMG6-213ENST00000573166 SPRR4Q96PI1 79 aa6.32□□□□□ -1.4
SMG6-213ENST00000573166 DMBT1Q9UGM3 2413 aaPredicted RBP6.31□□□□□ -1.4
SMG6-213ENST00000573166 hDV103S1A0JD37 113 aa6.31□□□□□ -1.4
SMG6-213ENST00000573166 H0Y9P7 68 aa6.31□□□□□ -1.4
SMG6-213ENST00000573166 SSBP3-AS1Q7Z2R9 100 aa6.31□□□□□ -1.4
SMG6-213ENST00000573166 LINC01600Q96MT4 127 aa6.31□□□□□ -1.4
SMG6-213ENST00000573166 SMIM29Q86T20 159 aa6.3□□□□□ -1.4
SMG6-213ENST00000573166 ZNF469Q96JG9 3925 aaPredicted RBP6.3□□□□□ -1.4
SMG6-213ENST00000573166 PANO1I0J062 215 aa6.29□□□□□ -1.4
SMG6-213ENST00000573166 LINC00304Q8N9R0 145 aa6.29□□□□□ -1.4
SMG6-213ENST00000573166 A0A0G2JQZ4 141 aa6.29□□□□□ -1.4
SMG6-213ENST00000573166 PCOTHQ58A44 107 aa6.28□□□□□ -1.4
SMG6-213ENST00000573166 IGFL1Q6UW32 110 aa6.28□□□□□ -1.4
SMG6-213ENST00000573166 K7ERS5 55 aa6.28□□□□□ -1.4
SMG6-213ENST00000573166 TRBV7-4A0A0J9YYF1 115 aa6.26□□□□□ -1.41
SMG6-213ENST00000573166 FLG2Q5D862 2391 aaPredicted RBP6.26□□□□□ -1.41
SMG6-213ENST00000573166 C1orf64Q8NEQ6 169 aa6.26□□□□□ -1.41
SMG6-213ENST00000573166 SPAG11AQ6PDA7 123 aa6.25□□□□□ -1.41
SMG6-213ENST00000573166 SPRR1AP35321 89 aa6.24□□□□□ -1.41
SMG6-213ENST00000573166 PRR26Q8N8Z3 221 aa6.23□□□□□ -1.41
SMG6-213ENST00000573166 FBN3Q75N90 2809 aa6.23□□□□□ -1.41
SMG6-213ENST00000573166 Q5VSD8 79 aa6.22□□□□□ -1.41
SMG6-213ENST00000573166 RETNLBQ9BQ08 111 aa6.22□□□□□ -1.41
SMG6-213ENST00000573166 OBSCN-AS1Q96MR7 158 aa6.22□□□□□ -1.41
SMG6-213ENST00000573166 AKAP9Q99996 3911 aa6.2□□□□□ -1.42
SMG6-213ENST00000573166 KLKP1Q107X0 134 aa6.2□□□□□ -1.42
SMG6-213ENST00000573166 IGLV5-48A0A075B6I7 105 aa6.2□□□□□ -1.42
SMG6-213ENST00000573166 H3BPC8 53 aa6.2□□□□□ -1.42
SMG6-213ENST00000573166 TP53AIP1Q9HCN2 124 aa6.2□□□□□ -1.42
SMG6-213ENST00000573166 CD164Q04900 197 aa6.19□□□□□ -1.42
SMG6-213ENST00000573166 OXTP01178 125 aa6.18□□□□□ -1.42
SMG6-213ENST00000573166 LINC00313P59037 77 aa6.18□□□□□ -1.42
SMG6-213ENST00000573166 A0A1W2PNM2 257 aa6.17□□□□□ -1.42
SMG6-213ENST00000573166 SPINK1P00995 79 aa6.17□□□□□ -1.42
SMG6-213ENST00000573166 FAM229BQ4G0N7 80 aa6.17□□□□□ -1.42
SMG6-213ENST00000573166 TRAV22A0A0B4J277 110 aa6.16□□□□□ -1.42
SMG6-213ENST00000573166 H7BZZ5 65 aa6.15□□□□□ -1.42
SMG6-213ENST00000573166 Q96NJ1 140 aa6.15□□□□□ -1.43
SMG6-213ENST00000573166 A8MUN3 132 aa6.14□□□□□ -1.43
SMG6-213ENST00000573166 A8MWP4 228 aa6.13□□□□□ -1.43
SMG6-213ENST00000573166 K7EQZ3 153 aa6.13□□□□□ -1.43
SMG6-213ENST00000573166 C9orf92A6NGG3 77 aa6.11□□□□□ -1.43
SMG6-213ENST00000573166 KRTAP11-1Q8IUC1 163 aa6.11□□□□□ -1.43
SMG6-213ENST00000573166 KRTAP7-1Q8IUC3 87 aa6.11□□□□□ -1.43
SMG6-213ENST00000573166 IGKV2D-30A0A075B6S6 120 aa6.11□□□□□ -1.43
SMG6-213ENST00000573166 IGKV2-30P06310 120 aa6.11□□□□□ -1.43
SMG6-213ENST00000573166 KRTAP4-16G5E9R7 235 aaPredicted RBP6.11□□□□□ -1.43
SMG6-213ENST00000573166 SPRR1BP22528 89 aa6.1□□□□□ -1.43
SMG6-213ENST00000573166 C8orf87E5RJ46 101 aa6.1□□□□□ -1.43
SMG6-213ENST00000573166 DSCR10P59022 87 aa6.1□□□□□ -1.43
SMG6-213ENST00000573166 ACYP2P14621 99 aa6.09□□□□□ -1.43
SMG6-213ENST00000573166 Q5XG85 94 aa6.09□□□□□ -1.43
SMG6-213ENST00000573166 ATP11AUNQ6ZP68 121 aa6.08□□□□□ -1.44
SMG6-213ENST00000573166 PRR15Q8IV56 129 aa6.08□□□□□ -1.44
SMG6-213ENST00000573166 A0A1B0GVX0 72 aa6.07□□□□□ -1.44
SMG6-213ENST00000573166 A0A1B0GU69 56 aa6.07□□□□□ -1.44
SMG6-213ENST00000573166 C8orf17Q9NRJ1 99 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms