RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 C21orf62-AS1Q17RA5 79 aa12.59□□□□□ -0.39
CHRNE-202ENST00000572438 SPRR1BP22528 89 aa12.58□□□□□ -0.4
CHRNE-202ENST00000572438 F8WEM9 126 aa12.55□□□□□ -0.4
CHRNE-202ENST00000572438 ZNF861PO60384 105 aa12.55□□□□□ -0.4
CHRNE-202ENST00000572438 LINC00643Q86TS7 51 aa12.55□□□□□ -0.4
CHRNE-202ENST00000572438 A0A1B0GVY2 172 aa12.54□□□□□ -0.4
CHRNE-202ENST00000572438 HAMPP81172 84 aa12.53□□□□□ -0.4
CHRNE-202ENST00000572438 IGLV7-43P04211 117 aa12.51□□□□□ -0.41
CHRNE-202ENST00000572438 SRRM2Q9UQ35 2752 aaKnown RBP12.5□□□□□ -0.41
CHRNE-202ENST00000572438 IGLV8-61A0A075B6I0 122 aa12.49□□□□□ -0.41
CHRNE-202ENST00000572438 SPRR4Q96PI1 79 aa12.49□□□□□ -0.41
CHRNE-202ENST00000572438 ZNF706Q9Y5V0 76 aaPredicted RBP12.49□□□□□ -0.41
CHRNE-202ENST00000572438 LRP1BQ9NZR2 4599 aa12.49□□□□□ -0.41
CHRNE-202ENST00000572438 UBL5Q9BZL1 73 aa12.48□□□□□ -0.41
CHRNE-202ENST00000572438 DYNC1H1Q14204 4646 aaKnown RBP12.46□□□□□ -0.41
CHRNE-202ENST00000572438 PKHD1P08F94 4074 aa12.46□□□□□ -0.41
CHRNE-202ENST00000572438 A0A1W2PNM2 257 aa12.46□□□□□ -0.42
CHRNE-202ENST00000572438 LINC00483Q53H64 154 aa12.46□□□□□ -0.42
CHRNE-202ENST00000572438 Q8NBF4 154 aa12.44□□□□□ -0.42
CHRNE-202ENST00000572438 Q6JHZ5 121 aa12.44□□□□□ -0.42
CHRNE-202ENST00000572438 IGFL1Q6UW32 110 aa12.44□□□□□ -0.42
CHRNE-202ENST00000572438 TRBV7-7A0A0K0K1E9 115 aa12.42□□□□□ -0.42
CHRNE-202ENST00000572438 A0A1B0GW54 56 aa12.42□□□□□ -0.42
CHRNE-202ENST00000572438 Q6ZVQ6 151 aa12.41□□□□□ -0.42
CHRNE-202ENST00000572438 SCGB1A1P11684 91 aa12.39□□□□□ -0.43
CHRNE-202ENST00000572438 Q6Q795 121 aa12.39□□□□□ -0.43
CHRNE-202ENST00000572438 A0A0G2JQZ4 141 aa12.39□□□□□ -0.43
CHRNE-202ENST00000572438 ATP5EP2Q5VTU8 51 aa12.38□□□□□ -0.43
CHRNE-202ENST00000572438 IGKV3D-7A0A0C4DH55 119 aa12.37□□□□□ -0.43
CHRNE-202ENST00000572438 IMUPQ9GZP8 106 aa12.37□□□□□ -0.43
CHRNE-202ENST00000572438 CRYGAP11844 174 aa12.37□□□□□ -0.43
CHRNE-202ENST00000572438 IGLV9-49A0A0B4J1Y8 123 aa12.34□□□□□ -0.43
CHRNE-202ENST00000572438 NREPQ16612 68 aa12.32□□□□□ -0.44
CHRNE-202ENST00000572438 ANAPC11Q9NYG5 84 aa12.32□□□□□ -0.44
CHRNE-202ENST00000572438 C9orf153Q5TBE3 101 aa12.32□□□□□ -0.44
CHRNE-202ENST00000572438 RPL37AP61513 92 aaKnown RBP12.3□□□□□ -0.44
CHRNE-202ENST00000572438 APOBP04114 4563 aaKnown RBP12.3□□□□□ -0.44
CHRNE-202ENST00000572438 EPPK1P58107 5090 aaKnown RBP12.28□□□□□ -0.44
CHRNE-202ENST00000572438 CXCL6P80162 114 aa12.27□□□□□ -0.44
CHRNE-202ENST00000572438 MOBPQ13875 183 aa12.26□□□□□ -0.45
CHRNE-202ENST00000572438 PCP4P48539 62 aa12.25□□□□□ -0.45
CHRNE-202ENST00000572438 VPS13BQ7Z7G8 4022 aa12.25□□□□□ -0.45
CHRNE-202ENST00000572438 A0A087WSZ3 146 aa12.25□□□□□ -0.45
CHRNE-202ENST00000572438 HIST1H4AP62805 103 aaKnown RBP12.23□□□□□ -0.45
CHRNE-202ENST00000572438 SMR3BP02814 79 aaPredicted RBP12.22□□□□□ -0.45
CHRNE-202ENST00000572438 BPY2O14599 106 aa12.21□□□□□ -0.46
CHRNE-202ENST00000572438 A0A087WVE0 104 aa12.19□□□□□ -0.46
CHRNE-202ENST00000572438 FAM236AA0A1B0GUQ0 79 aa12.18□□□□□ -0.46
CHRNE-202ENST00000572438 FAM236BA0A1B0GV22 79 aa12.18□□□□□ -0.46
CHRNE-202ENST00000572438 FAM229BQ4G0N7 80 aa12.18□□□□□ -0.46
CHRNE-202ENST00000572438 KRTAP1-4P0C5Y4 121 aa12.16□□□□□ -0.46
CHRNE-202ENST00000572438 SPINK6Q6UWN8 80 aa12.16□□□□□ -0.46
CHRNE-202ENST00000572438 SSBP3-AS1Q7Z2R9 100 aa12.14□□□□□ -0.47
CHRNE-202ENST00000572438 A0A087X002 238 aa12.14□□□□□ -0.47
CHRNE-202ENST00000572438 HRCT1Q6UXD1 115 aa12.14□□□□□ -0.47
CHRNE-202ENST00000572438 FAT1Q14517 4588 aa12.13□□□□□ -0.47
CHRNE-202ENST00000572438 KRTAP13-2Q52LG2 175 aa12.11□□□□□ -0.47
CHRNE-202ENST00000572438 Q8N9L7 120 aa12.11□□□□□ -0.47
CHRNE-202ENST00000572438 KRTAP10-4P60372 401 aaPredicted RBP12.1□□□□□ -0.47
CHRNE-202ENST00000572438 IGKV4-1P06312 121 aa12.09□□□□□ -0.47
CHRNE-202ENST00000572438 ANAPC13Q9BS18 74 aa12.09□□□□□ -0.47
CHRNE-202ENST00000572438 DSCR10P59022 87 aa12.08□□□□□ -0.48
CHRNE-202ENST00000572438 PLA2G1BP04054 148 aaKnown RBP12.07□□□□□ -0.48
CHRNE-202ENST00000572438 LINC00472Q9H8W2 130 aa12.07□□□□□ -0.48
CHRNE-202ENST00000572438 CD164Q04900 197 aa12.07□□□□□ -0.48
CHRNE-202ENST00000572438 DEFB116Q30KQ4 102 aa12.07□□□□□ -0.48
CHRNE-202ENST00000572438 SS18L2Q9UHA2 77 aa12.07□□□□□ -0.48
CHRNE-202ENST00000572438 CDK2AP2O75956 126 aa12.03□□□□□ -0.48
CHRNE-202ENST00000572438 ATOX1O00244 68 aa12.02□□□□□ -0.48
CHRNE-202ENST00000572438 K7EQZ3 153 aa12.01□□□□□ -0.49
CHRNE-202ENST00000572438 Q96NJ1 140 aa12□□□□□ -0.49
CHRNE-202ENST00000572438 J3KT08 172 aa11.99□□□□□ -0.49
CHRNE-202ENST00000572438 FAM229AH3BQW9 127 aa11.97□□□□□ -0.49
CHRNE-202ENST00000572438 RYR1P21817 5038 aa11.96□□□□□ -0.49
CHRNE-202ENST00000572438 TYMSOSQ8TAI1 123 aa11.96□□□□□ -0.49
CHRNE-202ENST00000572438 HSPG2P98160 4391 aa11.96□□□□□ -0.5
CHRNE-202ENST00000572438 KIAA1109Q2LD37 5005 aa11.95□□□□□ -0.5
CHRNE-202ENST00000572438 BIRC6Q9NR09 4857 aa11.95□□□□□ -0.5
CHRNE-202ENST00000572438 A8MWP4 228 aa11.95□□□□□ -0.5
CHRNE-202ENST00000572438 PRR26Q8N8Z3 221 aa11.93□□□□□ -0.5
CHRNE-202ENST00000572438 PRR15Q8IV56 129 aa11.92□□□□□ -0.5
CHRNE-202ENST00000572438 ASB16-AS1Q495Z4 193 aa11.9□□□□□ -0.5
CHRNE-202ENST00000572438 Q5VSD8 79 aa11.89□□□□□ -0.51
CHRNE-202ENST00000572438 Q5XG85 94 aa11.89□□□□□ -0.51
CHRNE-202ENST00000572438 HCG22E2RYF7 251 aa11.88□□□□□ -0.51
CHRNE-202ENST00000572438 NDUFB1O75438 58 aa11.88□□□□□ -0.51
CHRNE-202ENST00000572438 SERP2Q8N6R1 65 aa11.88□□□□□ -0.51
CHRNE-202ENST00000572438 PKHD1L1Q86WI1 4243 aa11.87□□□□□ -0.51
CHRNE-202ENST00000572438 C4orf48Q5BLP8 95 aa11.87□□□□□ -0.51
CHRNE-202ENST00000572438 SMIM20Q8N5G0 67 aa11.86□□□□□ -0.51
CHRNE-202ENST00000572438 COX7CP15954 63 aa11.84□□□□□ -0.51
CHRNE-202ENST00000572438 LIMD2Q9BT23 127 aa11.84□□□□□ -0.51
CHRNE-202ENST00000572438 CCDC179H3BU77 68 aa11.83□□□□□ -0.52
CHRNE-202ENST00000572438 SPINK1P00995 79 aa11.83□□□□□ -0.52
CHRNE-202ENST00000572438 LINC00304Q8N9R0 145 aa11.82□□□□□ -0.52
CHRNE-202ENST00000572438 TRAV7A0A075B6U4 112 aa11.81□□□□□ -0.52
CHRNE-202ENST00000572438 UQCRQO14949 82 aa11.81□□□□□ -0.52
CHRNE-202ENST00000572438 SPAG11AQ6PDA7 123 aa11.8□□□□□ -0.52
CHRNE-202ENST00000572438 WFDC13Q8IUB5 93 aa11.8□□□□□ -0.52
CHRNE-202ENST00000572438 KRTAP17-1Q9BYP8 105 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms