RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 DAZ4Q86SG3 579 aaKnown RBP3.36□□□□□ -1.87
SF3B3-214ENST00000572365 CIRBP-AS1Q8TBR5 109 aa3.36□□□□□ -1.87
SF3B3-214ENST00000572365 BRK1Q8WUW1 75 aa3.36□□□□□ -1.87
SF3B3-214ENST00000572365 UBL5Q9BZL1 73 aa3.36□□□□□ -1.87
SF3B3-214ENST00000572365 ANAPC11Q9NYG5 84 aa3.36□□□□□ -1.87
SF3B3-214ENST00000572365 IGLV4-69A0A075B6H9 119 aa3.35□□□□□ -1.87
SF3B3-214ENST00000572365 TRAV21A0A0B4J279 112 aa3.35□□□□□ -1.87
SF3B3-214ENST00000572365 IGHV1-58A0A0C4DH39 117 aa3.35□□□□□ -1.87
SF3B3-214ENST00000572365 TRBV6-5A0A0K0K1A5 114 aa3.35□□□□□ -1.87
SF3B3-214ENST00000572365 IGIPA6NJ69 53 aa3.35□□□□□ -1.87
SF3B3-214ENST00000572365 ZNF861PO60384 105 aa3.35□□□□□ -1.87
SF3B3-214ENST00000572365 PDE6GP18545 87 aa3.35□□□□□ -1.87
SF3B3-214ENST00000572365 S100A4P26447 101 aaKnown RBP3.35□□□□□ -1.87
SF3B3-214ENST00000572365 XCL1P47992 114 aa3.35□□□□□ -1.87
SF3B3-214ENST00000572365 RPL37AP61513 92 aaKnown RBP3.35□□□□□ -1.87
SF3B3-214ENST00000572365 SNRPD3P62318 126 aaKnown RBP3.35□□□□□ -1.87
SF3B3-214ENST00000572365 WFDC10BQ8IUB3 73 aa3.35□□□□□ -1.87
SF3B3-214ENST00000572365 Q8N814 137 aa3.35□□□□□ -1.87
SF3B3-214ENST00000572365 PANO1I0J062 215 aa3.34□□□□□ -1.87
SF3B3-214ENST00000572365 NDUFS5O43920 106 aa3.34□□□□□ -1.87
SF3B3-214ENST00000572365 RBM3P98179 157 aaKnown RBP3.34□□□□□ -1.87
SF3B3-214ENST00000572365 KRTAP5-4Q6L8H1 288 aa3.34□□□□□ -1.87
SF3B3-214ENST00000572365 AMELXQ99217 191 aa3.34□□□□□ -1.87
SF3B3-214ENST00000572365 UBE2D4Q9Y2X8 147 aa3.34□□□□□ -1.87
SF3B3-214ENST00000572365 PHLDA3Q9Y5J5 127 aa3.34□□□□□ -1.87
SF3B3-214ENST00000572365 TRBV27A0A0K0K1C4 114 aa3.33□□□□□ -1.88
SF3B3-214ENST00000572365 LYPD5Q6UWN5 251 aa3.33□□□□□ -1.88
SF3B3-214ENST00000572365 Q6ZSA8 131 aa3.33□□□□□ -1.88
SF3B3-214ENST00000572365 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
SF3B3-214ENST00000572365 NDUFA12Q9UI09 145 aa3.33□□□□□ -1.88
SF3B3-214ENST00000572365 H0Y9J4 135 aa3.32□□□□□ -1.88
SF3B3-214ENST00000572365 INSP01308 110 aa3.32□□□□□ -1.88
SF3B3-214ENST00000572365 IGKV1-17P01599 117 aa3.32□□□□□ -1.88
SF3B3-214ENST00000572365 IGHV3-53P01767 116 aa3.32□□□□□ -1.88
SF3B3-214ENST00000572365 CCKP06307 115 aa3.32□□□□□ -1.88
SF3B3-214ENST00000572365 RPL28P46779 137 aaKnown RBP3.32□□□□□ -1.88
SF3B3-214ENST00000572365 POLR2KP53803 58 aaKnown RBP3.32□□□□□ -1.88
SF3B3-214ENST00000572365 KIAA0087Q14695 138 aa3.32□□□□□ -1.88
SF3B3-214ENST00000572365 FAM19A1Q7Z5A9 133 aa3.32□□□□□ -1.88
SF3B3-214ENST00000572365 C20orf197Q8N268 126 aa3.32□□□□□ -1.88
SF3B3-214ENST00000572365 SMCR5Q8TEV8 140 aa3.32□□□□□ -1.88
SF3B3-214ENST00000572365 OBSCN-AS1Q96MR7 158 aa3.32□□□□□ -1.88
SF3B3-214ENST00000572365 IGKV2-40A0A087WW87 121 aaPredicted RBP3.31□□□□□ -1.88
SF3B3-214ENST00000572365 IBA57-AS1B1ANH7 110 aa3.31□□□□□ -1.88
SF3B3-214ENST00000572365 H7BZZ5 65 aa3.31□□□□□ -1.88
SF3B3-214ENST00000572365 TMEM256-PLSCR3K7ERE1 68 aa3.31□□□□□ -1.88
SF3B3-214ENST00000572365 UBE2L6O14933 153 aa3.31□□□□□ -1.88
SF3B3-214ENST00000572365 NDUFA1O15239 70 aa3.31□□□□□ -1.88
SF3B3-214ENST00000572365 IGKV2D-40P01614 121 aaPredicted RBP3.31□□□□□ -1.88
SF3B3-214ENST00000572365 IGHV3-30-3P0DP02 117 aa3.31□□□□□ -1.88
SF3B3-214ENST00000572365 RNASE4P34096 147 aaKnown RBP3.31□□□□□ -1.88
SF3B3-214ENST00000572365 Q6ZTI0 123 aa3.31□□□□□ -1.88
SF3B3-214ENST00000572365 CLEC2BQ92478 149 aa3.31□□□□□ -1.88
SF3B3-214ENST00000572365 CRPP02741 224 aa3.3□□□□□ -1.88
SF3B3-214ENST00000572365 MGPP08493 103 aa3.3□□□□□ -1.88
SF3B3-214ENST00000572365 ORMDL1Q9P0S3 153 aa3.3□□□□□ -1.88
SF3B3-214ENST00000572365 TSPEAR-AS2P59090 65 aa3.29□□□□□ -1.88
SF3B3-214ENST00000572365 UBE2BP63146 152 aa3.29□□□□□ -1.88
SF3B3-214ENST00000572365 Q1T7F1 81 aa3.29□□□□□ -1.88
SF3B3-214ENST00000572365 TRGV2A0A075B6R0 118 aa3.28□□□□□ -1.88
SF3B3-214ENST00000572365 IGKV3D-7A0A0C4DH55 119 aa3.28□□□□□ -1.88
SF3B3-214ENST00000572365 F8WEM9 126 aa3.28□□□□□ -1.88
SF3B3-214ENST00000572365 LINC00308Q8TCZ7 52 aa3.28□□□□□ -1.88
SF3B3-214ENST00000572365 LINC00467Q9BRT7 94 aa3.28□□□□□ -1.88
SF3B3-214ENST00000572365 TRAV12-3A0A0B4J271 114 aa3.27□□□□□ -1.89
SF3B3-214ENST00000572365 FP248Q71RG6 208 aaPredicted RBP3.27□□□□□ -1.89
SF3B3-214ENST00000572365 LINC00846Q9NV44 126 aa3.27□□□□□ -1.89
SF3B3-214ENST00000572365 TRGV1A0A0A0MS02 117 aa3.26□□□□□ -1.89
SF3B3-214ENST00000572365 FAM19A3Q7Z5A8 133 aa3.26□□□□□ -1.89
SF3B3-214ENST00000572365 KTN1-AS1Q86SY8 53 aa3.26□□□□□ -1.89
SF3B3-214ENST00000572365 Q8TAT8 98 aa3.26□□□□□ -1.89
SF3B3-214ENST00000572365 RPL39LQ96EH5 51 aaKnown RBP3.26□□□□□ -1.89
SF3B3-214ENST00000572365 TRAV23DV6A0A075B6W5 121 aa3.25□□□□□ -1.89
SF3B3-214ENST00000572365 A0A0J9YXV3 536 aa3.25□□□□□ -1.89
SF3B3-214ENST00000572365 H3BNG1 76 aa3.25□□□□□ -1.89
SF3B3-214ENST00000572365 NDUFB1O75438 58 aa3.25□□□□□ -1.89
SF3B3-214ENST00000572365 UBE2AP49459 152 aa3.25□□□□□ -1.89
SF3B3-214ENST00000572365 KRTAP10-8P60410 259 aa3.25□□□□□ -1.89
SF3B3-214ENST00000572365 REG3AQ06141 175 aa3.25□□□□□ -1.89
SF3B3-214ENST00000572365 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.25□□□□□ -1.89
SF3B3-214ENST00000572365 CAMK2N1Q7Z7J9 78 aa3.25□□□□□ -1.89
SF3B3-214ENST00000572365 KRTAP11-1Q8IUC1 163 aa3.25□□□□□ -1.89
SF3B3-214ENST00000572365 CYP4F30PQ9H0H9 118 aa3.25□□□□□ -1.89
SF3B3-214ENST00000572365 C14orf132Q9NPU4 83 aa3.25□□□□□ -1.89
SF3B3-214ENST00000572365 LOC110117498A0A087WWA1 95 aa3.24□□□□□ -1.89
SF3B3-214ENST00000572365 A0A1B0GW54 56 aa3.24□□□□□ -1.89
SF3B3-214ENST00000572365 LINC00167Q96N53 147 aa3.24□□□□□ -1.89
SF3B3-214ENST00000572365 CYSTM1Q9H1C7 97 aa3.24□□□□□ -1.89
SF3B3-214ENST00000572365 A0A087WVE0 104 aa3.23□□□□□ -1.89
SF3B3-214ENST00000572365 A8MTW9 85 aa3.23□□□□□ -1.89
SF3B3-214ENST00000572365 RPL39P62891 51 aaKnown RBP3.23□□□□□ -1.89
SF3B3-214ENST00000572365 ENHOQ6UWT2 76 aa3.23□□□□□ -1.89
SF3B3-214ENST00000572365 ATP11AUNQ6ZP68 121 aa3.23□□□□□ -1.89
SF3B3-214ENST00000572365 TMEM254Q8TBM7 123 aa3.23□□□□□ -1.89
SF3B3-214ENST00000572365 LIMD2Q9BT23 127 aa3.23□□□□□ -1.89
SF3B3-214ENST00000572365 TRGV4A0A0C4DH28 118 aa3.22□□□□□ -1.89
SF3B3-214ENST00000572365 M0QY20 66 aa3.22□□□□□ -1.89
SF3B3-214ENST00000572365 PHF5AQ7RTV0 110 aaKnown RBP3.22□□□□□ -1.89
SF3B3-214ENST00000572365 PRO0255Q9UI72 69 aa3.22□□□□□ -1.89
SF3B3-214ENST00000572365 TRBV7-4A0A0J9YYF1 115 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms