RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 ANKRD39Q53RE8 183 aa5.38□□□□□ -1.55
CIITA-207ENST00000571545 HRCT1Q6UXD1 115 aa5.38□□□□□ -1.55
CIITA-207ENST00000571545 F8WEM9 126 aa5.37□□□□□ -1.55
CIITA-207ENST00000571545 S100A2P29034 98 aa5.37□□□□□ -1.55
CIITA-207ENST00000571545 MUSTN1Q8IVN3 82 aa5.37□□□□□ -1.55
CIITA-207ENST00000571545 ATOH7Q8N100 152 aa5.37□□□□□ -1.55
CIITA-207ENST00000571545 PCP2Q8IVA1 136 aa5.36□□□□□ -1.55
CIITA-207ENST00000571545 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
CIITA-207ENST00000571545 FAT4Q6V0I7 4981 aa5.36□□□□□ -1.55
CIITA-207ENST00000571545 TCL1BO95988 128 aa5.35□□□□□ -1.55
CIITA-207ENST00000571545 SMIM11BQ8TCY0 68 aa5.34□□□□□ -1.55
CIITA-207ENST00000571545 SMIM29Q86T20 159 aa5.33□□□□□ -1.56
CIITA-207ENST00000571545 MUC17Q685J3 4493 aa5.33□□□□□ -1.56
CIITA-207ENST00000571545 C9orf92A6NGG3 77 aa5.32□□□□□ -1.56
CIITA-207ENST00000571545 S100A6P06703 90 aa5.32□□□□□ -1.56
CIITA-207ENST00000571545 Q6JHZ5 121 aa5.32□□□□□ -1.56
CIITA-207ENST00000571545 BVES-AS1Q5T3Y7 98 aa5.31□□□□□ -1.56
CIITA-207ENST00000571545 HIST3H2BBQ8N257 126 aa5.31□□□□□ -1.56
CIITA-207ENST00000571545 PPDPFLQ8WWR9 84 aa5.31□□□□□ -1.56
CIITA-207ENST00000571545 HIST1H2BLQ99880 126 aa5.31□□□□□ -1.56
CIITA-207ENST00000571545 KRTAP4-1Q9BYQ7 146 aa5.31□□□□□ -1.56
CIITA-207ENST00000571545 hADV29S1A0JD25 119 aa5.3□□□□□ -1.56
CIITA-207ENST00000571545 PCOTHQ58A44 107 aa5.3□□□□□ -1.56
CIITA-207ENST00000571545 C1orf195Q5TG92 126 aa5.3□□□□□ -1.56
CIITA-207ENST00000571545 LINC00575Q6W349 94 aa5.3□□□□□ -1.56
CIITA-207ENST00000571545 IGLV8-61A0A075B6I0 122 aa5.29□□□□□ -1.56
CIITA-207ENST00000571545 SNCGO76070 127 aa5.29□□□□□ -1.56
CIITA-207ENST00000571545 SCGB1D1O95968 90 aa5.29□□□□□ -1.56
CIITA-207ENST00000571545 S100A1P23297 94 aa5.29□□□□□ -1.56
CIITA-207ENST00000571545 Q6ZQY7 126 aa5.29□□□□□ -1.56
CIITA-207ENST00000571545 CLEC2BQ92478 149 aa5.29□□□□□ -1.56
CIITA-207ENST00000571545 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.28□□□□□ -1.56
CIITA-207ENST00000571545 CFC1BP0CG36 223 aa5.27□□□□□ -1.57
CIITA-207ENST00000571545 HIST1H4GQ99525 98 aa5.27□□□□□ -1.57
CIITA-207ENST00000571545 RPL37P61927 97 aaKnown RBP5.26□□□□□ -1.57
CIITA-207ENST00000571545 OCIAD2Q56VL3 154 aa5.26□□□□□ -1.57
CIITA-207ENST00000571545 TRBV7-7A0A0K0K1E9 115 aa5.25□□□□□ -1.57
CIITA-207ENST00000571545 DLEU1O43261 78 aa5.24□□□□□ -1.57
CIITA-207ENST00000571545 COX8AP10176 69 aa5.24□□□□□ -1.57
CIITA-207ENST00000571545 C12orf57Q99622 126 aa5.24□□□□□ -1.57
CIITA-207ENST00000571545 SNHG12Q9BXW3 62 aa5.24□□□□□ -1.57
CIITA-207ENST00000571545 A0A0G2JQZ4 141 aa5.23□□□□□ -1.57
CIITA-207ENST00000571545 IGFL1Q6UW32 110 aa5.23□□□□□ -1.57
CIITA-207ENST00000571545 RAB37Q96AX2 223 aa5.23□□□□□ -1.57
CIITA-207ENST00000571545 SS18L2Q9UHA2 77 aa5.23□□□□□ -1.57
CIITA-207ENST00000571545 KRTAP4-2Q9BYR5 136 aa5.22□□□□□ -1.57
CIITA-207ENST00000571545 H0YGX0 51 aa5.21□□□□□ -1.58
CIITA-207ENST00000571545 A0A0B4J2C4 111 aa5.2□□□□□ -1.58
CIITA-207ENST00000571545 LST1O00453 97 aa5.2□□□□□ -1.58
CIITA-207ENST00000571545 COX6B2Q6YFQ2 88 aa5.2□□□□□ -1.58
CIITA-207ENST00000571545 HIGD1BQ9P298 99 aa5.2□□□□□ -1.58
CIITA-207ENST00000571545 A0A1B0GX51 115 aa5.19□□□□□ -1.58
CIITA-207ENST00000571545 MT1HP80294 61 aa5.19□□□□□ -1.58
CIITA-207ENST00000571545 KRTAP19-2Q3LHN2 52 aa5.19□□□□□ -1.58
CIITA-207ENST00000571545 LCE5AQ5TCM9 118 aa5.19□□□□□ -1.58
CIITA-207ENST00000571545 Q6Q795 121 aa5.19□□□□□ -1.58
CIITA-207ENST00000571545 ATP11AUNQ6ZP68 121 aa5.19□□□□□ -1.58
CIITA-207ENST00000571545 KRTAP4-11Q9BYQ6 195 aa5.19□□□□□ -1.58
CIITA-207ENST00000571545 CFC1P0CG37 223 aa5.18□□□□□ -1.58
CIITA-207ENST00000571545 Q75L30 129 aa5.18□□□□□ -1.58
CIITA-207ENST00000571545 KRTAP9-3Q9BYQ3 159 aa5.18□□□□□ -1.58
CIITA-207ENST00000571545 TEN1Q86WV5 123 aa5.17□□□□□ -1.58
CIITA-207ENST00000571545 VAMP8Q9BV40 100 aa5.17□□□□□ -1.58
CIITA-207ENST00000571545 H3BUT2 72 aa5.16□□□□□ -1.58
CIITA-207ENST00000571545 M0R2T5 61 aa5.16□□□□□ -1.58
CIITA-207ENST00000571545 SPATA45Q537H7 98 aa5.16□□□□□ -1.58
CIITA-207ENST00000571545 C14orf144Q96I85 54 aa5.16□□□□□ -1.58
CIITA-207ENST00000571545 OBSCN-AS1Q96MR7 158 aa5.16□□□□□ -1.58
CIITA-207ENST00000571545 PAM16Q9Y3D7 125 aa5.16□□□□□ -1.58
CIITA-207ENST00000571545 H3BQ85 93 aa5.15□□□□□ -1.59
CIITA-207ENST00000571545 NDUFV3P56181 108 aaKnown RBP5.15□□□□□ -1.59
CIITA-207ENST00000571545 CEND1Q8N111 149 aa5.14□□□□□ -1.59
CIITA-207ENST00000571545 PRO1854Q9UHT4 67 aa5.14□□□□□ -1.59
CIITA-207ENST00000571545 H3BMG7 143 aa5.13□□□□□ -1.59
CIITA-207ENST00000571545 DNAL4O96015 105 aa5.13□□□□□ -1.59
CIITA-207ENST00000571545 FABP2P12104 132 aa5.12□□□□□ -1.59
CIITA-207ENST00000571545 Q96NJ1 140 aa5.12□□□□□ -1.59
CIITA-207ENST00000571545 A0A087WSZ3 146 aa5.11□□□□□ -1.59
CIITA-207ENST00000571545 C2orf91Q6ZV80 131 aa5.11□□□□□ -1.59
CIITA-207ENST00000571545 FAM218AQ96MZ4 157 aa5.11□□□□□ -1.59
CIITA-207ENST00000571545 COX6CP09669 75 aa5.1□□□□□ -1.59
CIITA-207ENST00000571545 KRTAP10-6P60371 365 aaPredicted RBP5.1□□□□□ -1.59
CIITA-207ENST00000571545 C20orf166-AS1Q96NR2 134 aa5.1□□□□□ -1.59
CIITA-207ENST00000571545 TRIAP1O43715 76 aa5.09□□□□□ -1.59
CIITA-207ENST00000571545 ORMDL1Q9P0S3 153 aa5.09□□□□□ -1.59
CIITA-207ENST00000571545 CRCT1Q9UGL9 99 aa5.09□□□□□ -1.59
CIITA-207ENST00000571545 TRBV20-1A0A075B6N2 111 aa5.08□□□□□ -1.6
CIITA-207ENST00000571545 TRBV7-4A0A0J9YYF1 115 aa5.08□□□□□ -1.6
CIITA-207ENST00000571545 TMEM256-PLSCR3K7ERE1 68 aa5.08□□□□□ -1.6
CIITA-207ENST00000571545 HSD52Q0P140 79 aa5.08□□□□□ -1.6
CIITA-207ENST00000571545 SIGMAR1Q99720 223 aa5.08□□□□□ -1.6
CIITA-207ENST00000571545 A8MUU9 505 aa5.07□□□□□ -1.6
CIITA-207ENST00000571545 PSMB2P49721 201 aa5.07□□□□□ -1.6
CIITA-207ENST00000571545 FXYD2P54710 66 aa5.07□□□□□ -1.6
CIITA-207ENST00000571545 ANKRD29Q8N6D5 301 aa5.07□□□□□ -1.6
CIITA-207ENST00000571545 A0A1W2PNM2 257 aa5.04□□□□□ -1.6
CIITA-207ENST00000571545 LINC00313P59037 77 aa5.04□□□□□ -1.6
CIITA-207ENST00000571545 C21orf62-AS1Q17RA5 79 aa5.04□□□□□ -1.6
CIITA-207ENST00000571545 FSIP2Q5CZC0 6907 aa5.04□□□□□ -1.6
CIITA-207ENST00000571545 TRACP01848 142 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms